File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12756ms, 85.70% of 14884ms total Dropped 759 nodes (cum <= 74.42ms) flat flat% sum% cum cum% 0 0% 0% 14877ms 100% __libc_start_call_main 0 0% 0% 14877ms 100% __libc_start_main_impl 0 0% 0% 14877ms 100% _start 0 0% 0% 14874ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14874ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14874ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14874ms 99.93% main 0 0% 0% 14838ms 99.69% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14838ms 99.69% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14838ms 99.69% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 0 0% 0% 14816ms 99.54% AbstractCardiacProblem::Solve 5ms 0.034% 0.034% 11462ms 77.01% AbstractDynamicLinearPdeSolver::Solve 34ms 0.23% 0.26% 9184ms 61.70% AbstractCardiacTissue::SolveCellSystems 113ms 0.76% 1.02% 5706ms 38.34% AbstractCardiacCell::ComputeExceptVoltage 203ms 1.36% 2.39% 4919ms 33.05% AbstractOneStepIvpOdeSolver::InternalSolve 213ms 1.43% 3.82% 4124ms 27.71% EulerIvpOdeSolver::CalculateNextYValue 842ms 5.66% 9.47% 3861ms 25.94% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1767ms 11.87% 21.35% 3570ms 23.99% __GI___exp 2ms 0.013% 21.36% 3287ms 22.08% MonodomainProblem::WriteOneStep 1ms 0.0067% 21.37% 3169ms 21.29% Hdf5DataWriter::PutVector 0 0% 21.37% 3135ms 21.06% H5Dwrite 3ms 0.02% 21.39% 3109ms 20.89% H5D__write 104ms 0.7% 22.08% 2684ms 18.03% AbstractCardiacTissue::UpdateCaches (inline) 898ms 6.03% 28.12% 2539ms 17.06% CellLuoRudy1991FromCellML::GetIIonic 0 0% 28.12% 1793ms 12.05% H5D__chunk_collective_write 19ms 0.13% 28.25% 1793ms 12.05% H5F_set_coll_metadata_reads 1581ms 10.62% 38.87% 1725ms 11.59% __ieee754_exp_fma 13ms 0.087% 38.95% 1552ms 10.43% H5FD_s3comms_uriencode 1ms 0.0067% 38.96% 1437ms 9.65% LinearSystem::Solve 0 0% 38.96% 1288ms 8.65% KSPSolve 4ms 0.027% 38.99% 1288ms 8.65% KSPSolve_Private 3ms 0.02% 39.01% 1270ms 8.53% KSPSolve_CG 8ms 0.054% 39.06% 1225ms 8.23% H5D__chunk_cacheable 4ms 0.027% 39.09% 1170ms 7.86% H5F_block_write 1ms 0.0067% 39.10% 1166ms 7.83% H5PB_write 1ms 0.0067% 39.10% 1165ms 7.83% H5FD_write 0 0% 39.10% 1165ms 7.83% H5F__accum_write 42ms 0.28% 39.38% 1162ms 7.81% 3ms 0.02% 39.40% 1099ms 7.38% H5D__mpio_select_write 403ms 2.71% 42.11% 1059ms 7.12% H5S_select_iterate 0 0% 42.11% 994ms 6.68% PMPI_File_write_at_all 956ms 6.42% 48.54% 960ms 6.45% __GI_pwritev64 7ms 0.047% 48.58% 846ms 5.68% std::pow (inline) 91ms 0.61% 49.19% 839ms 5.64% __pow 381ms 2.56% 51.75% 821ms 5.52% MonodomainSolver::SetupLinearSystem 101ms 0.68% 52.43% 748ms 5.03% __ieee754_pow_fma 68ms 0.46% 52.89% 676ms 4.54% H5D__chunk_set_sizes 2ms 0.013% 52.90% 658ms 4.42% PCApply 2ms 0.013% 52.92% 653ms 4.39% PCApply_BJacobi_Singleblock 302ms 2.03% 54.94% 633ms 4.25% CellLuoRudy1991FromCellML::VerifyStateVariables 1ms 0.0067% 54.95% 624ms 4.19% KSPSolve_PREONLY 2ms 0.013% 54.97% 622ms 4.18% MatSolve 0 0% 54.97% 622ms 4.18% PCApply_ICC 610ms 4.10% 59.06% 620ms 4.17% MatSolve_SeqSBAIJ_1_NaturalOrdering 4ms 0.027% 59.09% 608ms 4.08% MatMult 601ms 4.04% 63.13% 604ms 4.06% MatMult_SeqAIJ 55ms 0.37% 63.50% 471ms 3.16% H5S_mpio_space_type 0 0% 63.50% 466ms 3.13% KSP_PCApply.lto_priv.7 352ms 2.36% 65.86% 352ms 2.36% log_inline (inline) 275ms 1.85% 67.71% 276ms 1.85% exp_inline (inline) 121ms 0.81% 68.52% 270ms 1.81% TimeStepper::TimeStepper 2ms 0.013% 68.54% 264ms 1.77% KSPConvergedDefault 55ms 0.37% 68.91% 226ms 1.52% __GI___libc_malloc 109ms 0.73% 69.64% 221ms 1.48% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 24ms 0.16% 69.80% 209ms 1.40% H5VM_chunk_index 1ms 0.0067% 69.81% 194ms 1.30% KSP_PCApply 160ms 1.07% 70.88% 192ms 1.29% _int_malloc 188ms 1.26% 72.14% 188ms 1.26% [libchaste_heart.so] 36ms 0.24% 72.39% 176ms 1.18% __GI___libc_free 170ms 1.14% 73.53% 170ms 1.14% std::isinf (inline) 132ms 0.89% 74.42% 165ms 1.11% AbstractOneStepIvpOdeSolver::Solve 7ms 0.047% 74.46% 165ms 1.11% MPI_Type_free 5ms 0.034% 74.50% 165ms 1.11% ompi_datatype_create 8ms 0.054% 74.55% 165ms 1.11% ompi_datatype_destroy 32ms 0.21% 74.76% 163ms 1.10% AbstractCardiacCell::SetVoltage (partial-inline) 95ms 0.64% 75.40% 163ms 1.10% top12 (inline) 151ms 1.01% 76.42% 151ms 1.01% TimeStepper::CalculateNextTime 19ms 0.13% 76.55% 147ms 0.99% H5S_set_version 127ms 0.85% 77.40% 140ms 0.94% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 53ms 0.36% 77.75% 140ms 0.94% _int_free 43ms 0.29% 78.04% 140ms 0.94% ompi_datatype_release_args 3ms 0.02% 78.06% 140ms 0.94% ompi_info_register_framework_params 129ms 0.87% 78.93% 129ms 0.87% ddot_ 55ms 0.37% 79.30% 128ms 0.86% H5VM_array_calc 0 0% 79.30% 127ms 0.85% VecDuplicate 7ms 0.047% 79.35% 127ms 0.85% VecDuplicate_MPI 61ms 0.41% 79.76% 117ms 0.79% H5S_hyper_add_span_element 0 0% 79.76% 116ms 0.78% Hdf5DataWriter::PutUnlimitedVariable 116ms 0.78% 80.54% 116ms 0.78% __ieee754_log_fma 2ms 0.013% 80.55% 115ms 0.77% PMPI_Type_create_resized 2ms 0.013% 80.56% 114ms 0.77% PMPI_File_set_view 103ms 0.69% 81.26% 109ms 0.73% AbstractParameterisedSystem::SetAnyVariable 3ms 0.02% 81.28% 103ms 0.69% VecNorm 3ms 0.02% 81.30% 101ms 0.68% ompi_datatype_duplicate 76ms 0.51% 81.81% 100ms 0.67% AbstractParameterisedSystem::GetAnyVariable 99ms 0.67% 82.47% 99ms 0.67% __memcpy_avx_unaligned_erms 93ms 0.62% 83.10% 93ms 0.62% H5VM_chunk_index_scaled 92ms 0.62% 83.71% 92ms 0.62% H5VM_array_offset_pre 0 0% 83.71% 92ms 0.62% VecNorm_Seq 39ms 0.26% 83.98% 90ms 0.6% std::__cxx11::basic_string::basic_string 54ms 0.36% 84.34% 88ms 0.59% AbstractCardiacCell::GetVoltage (partial-inline) 47ms 0.32% 84.65% 81ms 0.54% TimeStepper::AdvanceOneTimeStep 24ms 0.16% 84.82% 79ms 0.53% ompi_datatype_set_args 78ms 0.52% 85.34% 78ms 0.52% [libm.so.6] 27ms 0.18% 85.52% 76ms 0.51% H5S__hyper_rebuild 27ms 0.18% 85.70% 75ms 0.5% __libc_calloc