File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12476ms, 88.77% of 14055ms total Dropped 709 nodes (cum <= 70.28ms) flat flat% sum% cum cum% 0 0% 0% 14045ms 99.93% __libc_start_call_main 0 0% 0% 14045ms 99.93% __libc_start_main_impl 0 0% 0% 14045ms 99.93% _start 0 0% 0% 14042ms 99.91% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14042ms 99.91% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14042ms 99.91% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14042ms 99.91% main 0 0% 0% 14006ms 99.65% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14006ms 99.65% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14006ms 99.65% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 0 0% 0% 13985ms 99.50% AbstractCardiacProblem::Solve 1ms 0.0071% 0.0071% 10687ms 76.04% AbstractDynamicLinearPdeSolver::Solve 68ms 0.48% 0.49% 8372ms 59.57% AbstractCardiacTissue::SolveCellSystems 95ms 0.68% 1.17% 5183ms 36.88% AbstractCardiacCell::ComputeExceptVoltage 94ms 0.67% 1.84% 4640ms 33.01% AbstractOneStepIvpOdeSolver::InternalSolve 113ms 0.8% 2.64% 3978ms 28.30% EulerIvpOdeSolver::CalculateNextYValue 1015ms 7.22% 9.86% 3821ms 27.19% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 9.86% 3240ms 23.05% MonodomainProblem::WriteOneStep 1ms 0.0071% 9.87% 3170ms 22.55% Hdf5DataWriter::PutVector 2ms 0.014% 9.88% 3143ms 22.36% H5Dwrite 3ms 0.021% 9.90% 3119ms 22.19% H5D__write 1170ms 8.32% 18.23% 3059ms 21.76% __GI___exp 111ms 0.79% 19.02% 2330ms 16.58% AbstractCardiacTissue::UpdateCaches (inline) 545ms 3.88% 22.90% 2157ms 15.35% CellLuoRudy1991FromCellML::GetIIonic 1ms 0.0071% 22.90% 1896ms 13.49% H5D__chunk_collective_write 14ms 0.1% 23.00% 1895ms 13.48% H5F_set_coll_metadata_reads 6ms 0.043% 23.05% 1686ms 12.00% H5FD_s3comms_uriencode 1597ms 11.36% 34.41% 1630ms 11.60% __ieee754_exp_fma 0 0% 34.41% 1501ms 10.68% LinearSystem::Solve 2ms 0.014% 34.42% 1429ms 10.17% KSPSolve 4ms 0.028% 34.45% 1428ms 10.16% KSPSolve_Private 1ms 0.0071% 34.46% 1421ms 10.11% KSPSolve_CG 18ms 0.13% 34.59% 1394ms 9.92% 0 0% 34.59% 1379ms 9.81% H5F_block_write 1ms 0.0071% 34.59% 1379ms 9.81% H5PB_write 1ms 0.0071% 34.60% 1378ms 9.80% H5FD_write 0 0% 34.60% 1378ms 9.80% H5F__accum_write 0 0% 34.60% 1325ms 9.43% H5D__mpio_select_write 0 0% 34.60% 1278ms 9.09% PMPI_File_write_at_all 1261ms 8.97% 43.57% 1266ms 9.01% __GI_pwritev64 5ms 0.036% 43.61% 1176ms 8.37% H5D__chunk_cacheable 365ms 2.60% 46.20% 1033ms 7.35% H5S_select_iterate 22ms 0.16% 46.36% 880ms 6.26% std::pow (inline) 50ms 0.36% 46.72% 843ms 6.00% __pow 267ms 1.90% 48.62% 797ms 5.67% MonodomainSolver::SetupLinearSystem 27ms 0.19% 48.81% 785ms 5.59% __ieee754_pow_fma 2ms 0.014% 48.82% 772ms 5.49% PCApply 3ms 0.021% 48.84% 770ms 5.48% PCApply_BJacobi_Singleblock 0 0% 48.84% 734ms 5.22% KSPSolve_PREONLY 4ms 0.028% 48.87% 728ms 5.18% MatSolve 0 0% 48.87% 728ms 5.18% PCApply_ICC 722ms 5.14% 54.01% 724ms 5.15% MatSolve_SeqSBAIJ_1_NaturalOrdering 64ms 0.46% 54.46% 681ms 4.85% H5D__chunk_set_sizes 437ms 3.11% 57.57% 667ms 4.75% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 57.57% 658ms 4.68% MatMult 657ms 4.67% 62.25% 658ms 4.68% MatMult_SeqAIJ 612ms 4.35% 66.60% 612ms 4.35% [libchaste_heart.so] 1ms 0.0071% 66.61% 502ms 3.57% KSP_PCApply.lto_priv.7 344ms 2.45% 69.06% 392ms 2.79% exp_inline (inline) 51ms 0.36% 69.42% 377ms 2.68% H5S_mpio_space_type 348ms 2.48% 71.90% 348ms 2.48% log_inline (inline) 2ms 0.014% 71.91% 324ms 2.31% KSPConvergedDefault 123ms 0.88% 72.79% 299ms 2.13% TimeStepper::TimeStepper 26ms 0.18% 72.97% 290ms 2.06% H5VM_chunk_index 282ms 2.01% 74.98% 282ms 2.01% [libm.so.6] 0 0% 74.98% 273ms 1.94% KSP_PCApply 237ms 1.69% 76.66% 237ms 1.69% H5VM_chunk_index_scaled 190ms 1.35% 78.01% 190ms 1.35% TimeStepper::CalculateNextTime 15ms 0.11% 78.12% 176ms 1.25% ompi_datatype_destroy 77ms 0.55% 78.67% 174ms 1.24% __GI___libc_malloc 11ms 0.078% 78.75% 169ms 1.20% __GI___libc_free 1ms 0.0071% 78.75% 167ms 1.19% MPI_Type_free 103ms 0.73% 79.49% 157ms 1.12% _int_free 9ms 0.064% 79.55% 153ms 1.09% ompi_datatype_create 43ms 0.31% 79.86% 153ms 1.09% ompi_datatype_release_args 3ms 0.021% 79.88% 153ms 1.09% ompi_info_register_framework_params 30ms 0.21% 80.09% 142ms 1.01% AbstractCardiacCell::SetVoltage (partial-inline) 136ms 0.97% 81.06% 136ms 0.97% ddot_ 129ms 0.92% 81.98% 129ms 0.92% [libchaste_ode.so] 125ms 0.89% 82.87% 125ms 0.89% __ieee754_log_fma 24ms 0.17% 83.04% 123ms 0.88% H5S_set_version 93ms 0.66% 83.70% 116ms 0.83% _int_malloc 41ms 0.29% 83.99% 116ms 0.83% std::__cxx11::basic_string::basic_string 78ms 0.55% 84.55% 112ms 0.8% AbstractOneStepIvpOdeSolver::Solve 64ms 0.46% 85.00% 104ms 0.74% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 39ms 0.28% 85.28% 102ms 0.73% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 51ms 0.36% 85.64% 102ms 0.73% H5S_hyper_add_span_element 43ms 0.31% 85.95% 99ms 0.7% H5VM_array_calc 87ms 0.62% 86.57% 87ms 0.62% ReplicatableVector::operator[] 0 0% 86.57% 85ms 0.6% PMPI_Type_create_resized 47ms 0.33% 86.90% 84ms 0.6% TimeStepper::AdvanceOneTimeStep 81ms 0.58% 87.48% 81ms 0.58% asuint64 (inline) 1ms 0.0071% 87.48% 80ms 0.57% VecTDot 0 0% 87.48% 79ms 0.56% VecTDot_Seq 0 0% 87.48% 79ms 0.56% VecXDot_Seq_Private.constprop.0 0 0% 87.48% 78ms 0.55% VecNorm 48ms 0.34% 87.83% 78ms 0.55% __libc_calloc 3ms 0.021% 87.85% 77ms 0.55% VecNorm_Seq 32ms 0.23% 88.08% 76ms 0.54% AbstractCardiacCell::GetVoltage (partial-inline) 2ms 0.014% 88.09% 76ms 0.54% ompi_datatype_duplicate 56ms 0.4% 88.49% 73ms 0.52% AbstractParameterisedSystem::GetAnyVariable 35ms 0.25% 88.74% 73ms 0.52% std::char_traits::length (inline) 4ms 0.028% 88.77% 71ms 0.51% opal_datatype_create_desc