File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 9776ms, 86.13% of 11350ms total Dropped 706 nodes (cum <= 56.75ms) flat flat% sum% cum cum% 0 0% 0% 11340ms 99.91% __libc_start_call_main 0 0% 0% 11340ms 99.91% __libc_start_main_impl 0 0% 0% 11340ms 99.91% _start 0 0% 0% 11338ms 99.89% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 11338ms 99.89% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 11338ms 99.89% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 11338ms 99.89% main 0 0% 0% 11301ms 99.57% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 11301ms 99.57% CxxTest::TestRunner::runTest (inline) 0 0% 0% 11301ms 99.57% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 1ms 0.0088% 0.0088% 11282ms 99.40% AbstractCardiacProblem::Solve 1ms 0.0088% 0.018% 8874ms 78.19% AbstractDynamicLinearPdeSolver::Solve 42ms 0.37% 0.39% 7071ms 62.30% AbstractCardiacTissue::SolveCellSystems 72ms 0.63% 1.02% 4328ms 38.13% AbstractCardiacCell::ComputeExceptVoltage 83ms 0.73% 1.75% 3772ms 33.23% AbstractOneStepIvpOdeSolver::InternalSolve 123ms 1.08% 2.84% 3197ms 28.17% EulerIvpOdeSolver::CalculateNextYValue 703ms 6.19% 9.03% 3038ms 26.77% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1411ms 12.43% 21.46% 2774ms 24.44% __GI___exp 0 0% 21.46% 2361ms 20.80% MonodomainProblem::WriteOneStep 2ms 0.018% 21.48% 2298ms 20.25% Hdf5DataWriter::PutVector 3ms 0.026% 21.51% 2294ms 20.21% H5Dwrite 0 0% 21.51% 2268ms 19.98% H5D__write 99ms 0.87% 22.38% 2196ms 19.35% AbstractCardiacTissue::UpdateCaches (inline) 616ms 5.43% 27.81% 2040ms 17.97% CellLuoRudy1991FromCellML::GetIIonic 0 0% 27.81% 1408ms 12.41% H5D__chunk_collective_write 8ms 0.07% 27.88% 1408ms 12.41% H5F_set_coll_metadata_reads 1051ms 9.26% 37.14% 1313ms 11.57% __ieee754_exp_fma 13ms 0.11% 37.25% 1252ms 11.03% H5FD_s3comms_uriencode 2ms 0.018% 37.27% 1145ms 10.09% LinearSystem::Solve 0 0% 37.27% 1075ms 9.47% KSPSolve 0 0% 37.27% 1075ms 9.47% KSPSolve_Private 1ms 0.0088% 37.28% 1071ms 9.44% KSPSolve_CG 31ms 0.27% 37.55% 1039ms 9.15% 4ms 0.035% 37.59% 1022ms 9.00% H5F_block_write 1ms 0.0088% 37.59% 1018ms 8.97% H5FD_write 0 0% 37.59% 1018ms 8.97% H5F__accum_write 0 0% 37.59% 1018ms 8.97% H5PB_write 4ms 0.035% 37.63% 963ms 8.48% H5D__mpio_select_write 0 0% 37.63% 895ms 7.89% PMPI_File_write_at_all 870ms 7.67% 45.30% 875ms 7.71% __GI_pwritev64 4ms 0.035% 45.33% 803ms 7.07% H5D__chunk_cacheable 1ms 0.0088% 45.34% 747ms 6.58% std::pow (inline) 85ms 0.75% 46.09% 746ms 6.57% __pow 227ms 2.00% 48.09% 690ms 6.08% H5S_select_iterate 68ms 0.6% 48.69% 661ms 5.82% __ieee754_pow_fma 324ms 2.85% 51.54% 638ms 5.62% MonodomainSolver::SetupLinearSystem 0 0% 51.54% 590ms 5.20% PCApply 0 0% 51.54% 588ms 5.18% PCApply_BJacobi_Singleblock 1ms 0.0088% 51.55% 567ms 5.00% KSPSolve_PREONLY 1ms 0.0088% 51.56% 565ms 4.98% MatSolve 0 0% 51.56% 565ms 4.98% PCApply_ICC 556ms 4.90% 56.46% 564ms 4.97% MatSolve_SeqSBAIJ_1_NaturalOrdering 57ms 0.5% 56.96% 477ms 4.20% H5D__chunk_set_sizes 0 0% 56.96% 424ms 3.74% MatMult 421ms 3.71% 60.67% 424ms 3.74% MatMult_SeqAIJ 2ms 0.018% 60.69% 373ms 3.29% KSP_PCApply.lto_priv.7 203ms 1.79% 62.48% 347ms 3.06% CellLuoRudy1991FromCellML::VerifyStateVariables 324ms 2.85% 65.33% 324ms 2.85% log_inline (inline) 35ms 0.31% 65.64% 290ms 2.56% H5S_mpio_space_type 2ms 0.018% 65.66% 268ms 2.36% KSPConvergedDefault 234ms 2.06% 67.72% 244ms 2.15% exp_inline (inline) 183ms 1.61% 69.33% 230ms 2.03% top12 (inline) 89ms 0.78% 70.11% 224ms 1.97% TimeStepper::TimeStepper 1ms 0.0088% 70.12% 220ms 1.94% KSP_PCApply 188ms 1.66% 71.78% 188ms 1.66% [libchaste_heart.so] 42ms 0.37% 72.15% 159ms 1.40% AbstractCardiacCell::SetVoltage (partial-inline) 3ms 0.026% 72.18% 155ms 1.37% H5VM_chunk_index 134ms 1.18% 73.36% 134ms 1.18% ddot_ 6ms 0.053% 73.41% 132ms 1.16% ompi_datatype_destroy 5ms 0.044% 73.45% 130ms 1.15% MPI_Type_free 129ms 1.14% 74.59% 129ms 1.14% TimeStepper::CalculateNextTime 85ms 0.75% 75.34% 128ms 1.13% AbstractOneStepIvpOdeSolver::Solve 28ms 0.25% 75.59% 128ms 1.13% __GI___libc_malloc 18ms 0.16% 75.74% 124ms 1.09% __GI___libc_free 122ms 1.07% 76.82% 122ms 1.07% __memcpy_avx512_unaligned_erms 94ms 0.83% 77.65% 118ms 1.04% _int_malloc 3ms 0.026% 77.67% 117ms 1.03% ompi_info_register_framework_params 26ms 0.23% 77.90% 116ms 1.02% ompi_datatype_release_args 98ms 0.86% 78.77% 115ms 1.01% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 114ms 1.00% 79.77% 114ms 1.00% asuint64 (inline) 24ms 0.21% 79.98% 108ms 0.95% H5S_set_version 41ms 0.36% 80.34% 106ms 0.93% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 43ms 0.38% 80.72% 106ms 0.93% _int_free 77ms 0.68% 81.40% 100ms 0.88% AbstractParameterisedSystem::SetAnyVariable 6ms 0.053% 81.45% 100ms 0.88% ompi_datatype_create 0 0% 81.45% 98ms 0.86% std::vector::_M_assign_aux (inline) 0 0% 81.45% 98ms 0.86% std::vector::assign (inline) 79ms 0.7% 82.15% 97ms 0.85% AbstractParameterisedSystem::GetAnyVariable 1ms 0.0088% 82.16% 90ms 0.79% VecTDot 13ms 0.11% 82.27% 90ms 0.79% std::__copy_move::__copy_m (inline) 0 0% 82.27% 90ms 0.79% std::__copy_move_a (inline) 0 0% 82.27% 90ms 0.79% std::__copy_move_a1 (inline) 0 0% 82.27% 90ms 0.79% std::__copy_move_a2 (inline) 0 0% 82.27% 90ms 0.79% std::copy (inline) 0 0% 82.27% 89ms 0.78% VecTDot_Seq 0 0% 82.27% 89ms 0.78% VecXDot_Seq_Private.constprop.0 86ms 0.76% 83.03% 86ms 0.76% H5VM_chunk_index_scaled 0 0% 83.03% 85ms 0.75% PMPI_File_set_view 27ms 0.24% 83.27% 84ms 0.74% H5VM_array_calc 84ms 0.74% 84.01% 84ms 0.74% __ieee754_log_fma 23ms 0.2% 84.21% 71ms 0.63% AbstractCardiacCell::GetVoltage (partial-inline) 34ms 0.3% 84.51% 69ms 0.61% H5S_hyper_add_span_element 1ms 0.0088% 84.52% 69ms 0.61% VecNorm 68ms 0.6% 85.12% 68ms 0.6% ReplicatableVector::operator[] 66ms 0.58% 85.70% 66ms 0.58% H5VM_array_offset_pre 2ms 0.018% 85.72% 65ms 0.57% PMPI_Type_create_resized 1ms 0.0088% 85.73% 64ms 0.56% VecNorm_Seq 1ms 0.0088% 85.74% 63ms 0.56% Hdf5DataWriter::PutUnlimitedVariable 43ms 0.38% 86.11% 58ms 0.51% TimeStepper::AdvanceOneTimeStep 1ms 0.0088% 86.12% 57ms 0.5% VecDuplicate 1ms 0.0088% 86.13% 57ms 0.5% ompi_datatype_duplicate