File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 436ms, 90.46% of 482ms total Dropped 244 nodes (cum <= 2.41ms) flat flat% sum% cum cum% 0 0% 0% 472ms 97.93% __libc_start_call_main 0 0% 0% 472ms 97.93% __libc_start_main_impl 0 0% 0% 472ms 97.93% _start 0 0% 0% 469ms 97.30% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 469ms 97.30% CxxTest::TestRunner::runAllTests 0 0% 0% 469ms 97.30% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 469ms 97.30% main 0 0% 0% 432ms 89.63% CxxTest::RealTestDescription::run 0 0% 0% 432ms 89.63% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 432ms 89.63% CxxTest::TestRunner::runTest (inline) 0 0% 0% 432ms 89.63% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 432ms 89.63% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 427ms 88.59% AbstractCardiacProblem::Solve 0 0% 0% 425ms 88.17% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 389ms 80.71% KSPSolve 0 0% 0% 389ms 80.71% KSPSolve_Private 0 0% 0% 389ms 80.71% LinearSystem::Solve 0 0% 0% 387ms 80.29% KSPSolve_CG 0 0% 0% 240ms 49.79% KSP_PCApply.lto_priv.7 0 0% 0% 230ms 47.72% PCApply 0 0% 0% 230ms 47.72% PCApply_BJacobi_Singleblock 0 0% 0% 203ms 42.12% KSPSolve_PREONLY (partial-inline) 0 0% 0% 187ms 38.80% MatSolve 185ms 38.38% 38.38% 187ms 38.80% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 38.38% 187ms 38.80% PCApply_ICC 0 0% 38.38% 78ms 16.18% MatMult 0 0% 38.38% 78ms 16.18% MatMult_SeqAIJ 78ms 16.18% 54.56% 78ms 16.18% MatMult_SeqAIJ_Inode (inline) 49ms 10.17% 64.73% 49ms 10.17% ddot_ 0 0% 64.73% 36ms 7.47% MatNullSpaceRemove 0 0% 64.73% 34ms 7.05% CxxTest::RealWorldDescription::setUp 0 0% 64.73% 34ms 7.05% PetscInitialize 0 0% 64.73% 34ms 7.05% PetscSetup::setUpWorld 0 0% 64.73% 34ms 7.05% PetscSetupUtils::CommonSetup 0 0% 64.73% 34ms 7.05% PetscSetupUtils::InitialisePetsc 0 0% 64.73% 34ms 7.05% VecTDot 0 0% 64.73% 34ms 7.05% VecTDot_Seq 0 0% 64.73% 34ms 7.05% VecXDot_Seq_Private.constprop.0 0 0% 64.73% 33ms 6.85% PMPI_Init_thread 0 0% 64.73% 33ms 6.85% ompi_mpi_init 0 0% 64.73% 31ms 6.43% AbstractCardiacTissue::SolveCellSystems 2ms 0.41% 65.15% 29ms 6.02% 0 0% 65.15% 21ms 4.36% orte_init 0 0% 65.15% 18ms 3.73% AbstractCardiacCell::ComputeExceptVoltage 0 0% 65.15% 18ms 3.73% KSP_PCApply (partial-inline) 1ms 0.21% 65.35% 18ms 3.73% VecMAXPY 0 0% 65.35% 18ms 3.73% VecMDot 17ms 3.53% 68.88% 18ms 3.73% VecMDot_Seq 0 0% 68.88% 18ms 3.73% VecMXDot_Private 16ms 3.32% 72.20% 17ms 3.53% VecMAXPY_Seq 1ms 0.21% 72.41% 16ms 3.32% AbstractOneStepIvpOdeSolver::InternalSolve 1ms 0.21% 72.61% 15ms 3.11% EulerIvpOdeSolver::CalculateNextYValue 0 0% 72.61% 15ms 3.11% VecNorm 0 0% 72.61% 15ms 3.11% VecNorm_Seq 4ms 0.83% 73.44% 14ms 2.90% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 73.44% 14ms 2.90% __GI__dl_catch_exception 0 0% 73.44% 14ms 2.90% _dl_catch_error 0 0% 73.44% 14ms 2.90% _dlerror_run 0 0% 73.44% 14ms 2.90% hwloc_topology_load 0 0% 73.44% 13ms 2.70% VecDuplicate 0 0% 73.44% 13ms 2.70% hwloc_linux_get_tid_last_cpu_location 0 0% 73.44% 13ms 2.70% mca_base_framework_open 0 0% 73.44% 13ms 2.70% opal_stackframe_output 0 0% 73.44% 12ms 2.49% VecDuplicate_Seq 4ms 0.83% 74.27% 12ms 2.49% __GI___exp 0 0% 74.27% 12ms 2.49% ___dlopen 0 0% 74.27% 12ms 2.49% _dl_open 0 0% 74.27% 12ms 2.49% dl_open_worker 0 0% 74.27% 12ms 2.49% dlopen_doit 0 0% 74.27% 12ms 2.49% dlopen_implementation (inline) 0 0% 74.27% 12ms 2.49% mca_base_framework_components_register 0 0% 74.27% 12ms 2.49% mca_base_framework_register 0 0% 74.27% 11ms 2.28% mca_base_component_find 0 0% 74.27% 11ms 2.28% mca_base_component_repository_open 0 0% 74.27% 10ms 2.07% AbstractCardiacTissue::UpdateCaches (inline) 3ms 0.62% 74.90% 10ms 2.07% CellLuoRudy1991FromCellML::GetIIonic 4ms 0.83% 75.73% 10ms 2.07% PetscMallocA 0 0% 75.73% 10ms 2.07% VecAYPX 10ms 2.07% 77.80% 10ms 2.07% VecAYPX_Seq 0 0% 77.80% 10ms 2.07% _dl_init 0 0% 77.80% 10ms 2.07% call_init (inline) 0 0% 77.80% 10ms 2.07% dl_open_worker_begin 0 0% 77.80% 9ms 1.87% VecAXPY 0 0% 77.80% 9ms 1.87% VecAXPY_Seq 0 0% 77.80% 9ms 1.87% VecSetType 9ms 1.87% 79.67% 9ms 1.87% __memset_avx2_unaligned_erms 9ms 1.87% 81.54% 9ms 1.87% daxpy_ 0 0% 81.54% 8ms 1.66% PetscMemzero (inline) 0 0% 81.54% 8ms 1.66% VecCreate_Seq 6ms 1.24% 82.78% 8ms 1.66% __ieee754_exp_fma 0 0% 82.78% 8ms 1.66% _dl_map_object 0 0% 82.78% 8ms 1.66% _dl_start_user 2ms 0.41% 83.20% 8ms 1.66% boost::serialization::singleton::get_instance 0 0% 83.20% 6ms 1.24% PetscMallocAlign (partial-inline) 0 0% 83.20% 6ms 1.24% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 83.20% 6ms 1.24% opal_hwloc_base_get_topology 0 0% 83.20% 6ms 1.24% orte_ess_base_proc_binding 5ms 1.04% 84.23% 5ms 1.04% __GI___libc_read 1ms 0.21% 84.44% 5ms 1.04% __ieee754_pow_fma 0 0% 84.44% 5ms 1.04% __pow 0 0% 84.44% 5ms 1.04% _dl_map_object_from_fd 0 0% 84.44% 5ms 1.04% _dl_map_segments (inline) 0 0% 84.44% 5ms 1.04% std::pow (inline) 0 0% 84.44% 4ms 0.83% AbstractCardiacProblem::Initialise 0 0% 84.44% 4ms 0.83% BidomainSolver::SetupLinearSystem 0 0% 84.44% 4ms 0.83% PetscMemcpy (inline) 0 0% 84.44% 4ms 0.83% VecCreate 2ms 0.41% 84.85% 4ms 0.83% __GI___libc_malloc 2ms 0.41% 85.27% 4ms 0.83% __cxa_finalize 4ms 0.83% 86.10% 4ms 0.83% __memcpy_avx_unaligned_erms 4ms 0.83% 86.93% 4ms 0.83% __mmap64 0 0% 86.93% 4ms 0.83% _dl_call_fini 3ms 0.62% 87.55% 4ms 0.83% _int_malloc 0 0% 87.55% 4ms 0.83% mca_base_framework_components_open 0 0% 87.55% 3ms 0.62% CxxTest::RealWorldDescription::tearDown 0 0% 87.55% 3ms 0.62% KSPConvergedDefault 0 0% 87.55% 3ms 0.62% PetscFinalize 1ms 0.21% 87.76% 3ms 0.62% PetscHeaderCreate_Private 0 0% 87.76% 3ms 0.62% PetscSetup::tearDownWorld 0 0% 87.76% 3ms 0.62% PetscSetupUtils::CommonFinalize 0 0% 87.76% 3ms 0.62% XOpenDisplay 0 0% 87.76% 3ms 0.62% [hwloc_gl.so] 0 0% 87.76% 3ms 0.62% [libxcb.so.1.1.0] 0 0% 87.76% 3ms 0.62% _GLOBAL__sub_I_ChasteParameters_3_4.cpp 0 0% 87.76% 3ms 0.62% _XConnectXCB 3ms 0.62% 88.38% 3ms 0.62% __GI___open64_nocancel 0 0% 88.38% 3ms 0.62% __GI_exit 0 0% 88.38% 3ms 0.62% __run_exit_handlers 0 0% 88.38% 3ms 0.62% _dl_fini 1ms 0.21% 88.59% 3ms 0.62% _dl_fixup 0 0% 88.59% 3ms 0.62% _dl_lookup_symbol_x 0 0% 88.59% 3ms 0.62% _dl_map_object_deps 0 0% 88.59% 3ms 0.62% _dl_runtime_resolve_xsavec 1ms 0.21% 88.80% 3ms 0.62% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 88.80% 3ms 0.62% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 3ms 0.62% 89.42% 3ms 0.62% log_inline (inline) 0 0% 89.42% 3ms 0.62% mca_topo_base_dist_graph_neighbors_count 0 0% 89.42% 3ms 0.62% ompi_mpi_finalize 0 0% 89.42% 3ms 0.62% openaux 3ms 0.62% 90.04% 3ms 0.62% std::_Rb_tree_increment 2ms 0.41% 90.46% 3ms 0.62% top12 (inline) 0 0% 90.46% 3ms 0.62% xcb_connect_to_display_with_auth_info