File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 116058ms, 91.53% of 126796ms total Dropped 1175 nodes (cum <= 633.98ms) flat flat% sum% cum cum% 0 0% 0% 126779ms 100% __libc_start_call_main 0 0% 0% 126779ms 100% __libc_start_main_impl 0 0% 0% 126779ms 100% _start 0 0% 0% 126775ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 126775ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 126775ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 126775ms 100% main 0 0% 0% 126736ms 100% CxxTest::RealTestDescription::run 0 0% 0% 126736ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 126736ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 126736ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 126736ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 0 0% 0% 126735ms 100% AbstractConvergenceTester::Converge 6ms 0.0047% 0.0047% 125552ms 99.02% AbstractCardiacProblem::Solve 9ms 0.0071% 0.012% 124663ms 98.32% AbstractDynamicLinearPdeSolver::Solve 7ms 0.0055% 0.017% 68225ms 53.81% LinearSystem::Solve 0 0% 0.017% 67738ms 53.42% KSPSolve 11ms 0.0087% 0.026% 67738ms 53.42% KSPSolve_Private 14ms 0.011% 0.037% 67423ms 53.17% KSPSolve_SYMMLQ 461ms 0.36% 0.4% 47161ms 37.19% AbstractCardiacTissue::SolveCellSystems 5ms 0.0039% 0.4% 39200ms 30.92% PCApply 3ms 0.0024% 0.41% 39185ms 30.90% PCApply_BJacobi_Singleblock 962ms 0.76% 1.17% 36954ms 29.14% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 1ms 0.00079% 1.17% 36800ms 29.02% KSPSolve_PREONLY (partial-inline) 2ms 0.0016% 1.17% 35726ms 28.18% PCApply_ICC 4ms 0.0032% 1.17% 35724ms 28.17% MatSolve 35292ms 27.83% 29.00% 35720ms 28.17% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 2ms 0.0016% 29.01% 33820ms 26.67% KSP_PCApply.lto_priv.18 7750ms 6.11% 35.12% 32825ms 25.89% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 10ms 0.0079% 35.13% 22841ms 18.01% MatMult 353ms 0.28% 35.40% 22831ms 18.01% MatMult_SeqAIJ (partial-inline) 22300ms 17.59% 52.99% 22825ms 18.00% MatMult_SeqAIJ_Inode (inline) 2259ms 1.78% 54.77% 16919ms 13.34% CardiacNewtonSolver::Solve 5596ms 4.41% 59.19% 10007ms 7.89% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1570ms 1.24% 60.43% 9703ms 7.65% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 213ms 0.17% 60.59% 8833ms 6.97% AbstractCardiacTissue::UpdateCaches (inline) 1720ms 1.36% 61.95% 8302ms 6.55% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1303ms 1.03% 62.98% 8098ms 6.39% BidomainSolver::SetupLinearSystem 7849ms 6.19% 69.17% 7849ms 6.19% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 2ms 0.0016% 69.17% 7269ms 5.73% KSP_PCApply (partial-inline) 2ms 0.0016% 69.17% 6822ms 5.38% KSPConvergedDefault 4109ms 3.24% 72.41% 4207ms 3.32% __ieee754_log_fma 0 0% 72.41% 4159ms 3.28% boost::numeric::ublas::norm_inf (inline) 2872ms 2.27% 74.68% 4159ms 3.28% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 74.68% 4159ms 3.28% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 74.68% 4159ms 3.28% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 6ms 0.0047% 74.68% 3274ms 2.58% MatNullSpaceRemove 3197ms 2.52% 77.20% 3197ms 2.52% ddot_ 29ms 0.023% 77.23% 3101ms 2.45% std::pow (inline) 395ms 0.31% 77.54% 3058ms 2.41% __pow 1951ms 1.54% 79.08% 2974ms 2.35% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 2778ms 2.19% 81.27% 2778ms 2.19% __memcpy_avx_unaligned_erms 0 0% 81.27% 2728ms 2.15% PetscMemcpy (inline) 334ms 0.26% 81.53% 2624ms 2.07% __ieee754_pow_fma 11ms 0.0087% 81.54% 2558ms 2.02% VecDot 0 0% 81.54% 2547ms 2.01% VecDot_Seq 2ms 0.0016% 81.54% 2547ms 2.01% VecXDot_Seq_Private.constprop.0 17ms 0.013% 81.55% 2328ms 1.84% VecCopy 3ms 0.0024% 81.56% 2309ms 1.82% VecCopy_Seq (partial-inline) 1ms 0.00079% 81.56% 2096ms 1.65% VecMDot 5ms 0.0039% 81.56% 2095ms 1.65% VecMXDot_Private 13ms 0.01% 81.57% 2089ms 1.65% VecAXPY 2081ms 1.64% 83.21% 2087ms 1.65% VecMDot_Seq 3ms 0.0024% 83.21% 2076ms 1.64% VecAXPY_Seq 2060ms 1.62% 84.84% 2060ms 1.62% daxpy_ 2ms 0.0016% 84.84% 1970ms 1.55% AbstractFeVolumeIntegralAssembler::DoAssemble 38ms 0.03% 84.87% 1638ms 1.29% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1507ms 1.19% 86.06% 1557ms 1.23% exp_inline (inline) 0 0% 86.06% 1365ms 1.08% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 86.06% 1275ms 1.01% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 86.06% 1275ms 1.01% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 86.06% 1275ms 1.01% boost_numeric_ublas_abs (inline) 1275ms 1.01% 87.07% 1275ms 1.01% std::abs (inline) 7ms 0.0055% 87.07% 1172ms 0.92% VecMAXPY 1159ms 0.91% 87.98% 1165ms 0.92% VecMAXPY_Seq 7ms 0.0055% 87.99% 1095ms 0.86% boost::numeric::ublas::matrix_assign (inline) 232ms 0.18% 88.17% 1081ms 0.85% boost::numeric::ublas::indexing_matrix_assign 0 0% 88.17% 1022ms 0.81% CuboidMeshConstructor::Construct 0 0% 88.17% 1021ms 0.81% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 88.17% 1021ms 0.81% DistributedTetrahedralMesh::ConstructCuboid 4ms 0.0032% 88.18% 993ms 0.78% KSP_RemoveNullSpace (inline) 659ms 0.52% 88.70% 990ms 0.78% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 965ms 0.76% 89.46% 965ms 0.76% [libchaste_heart.so] 1ms 0.00079% 89.46% 924ms 0.73% VecNorm 6ms 0.0047% 89.46% 918ms 0.72% VecScale 0 0% 89.46% 912ms 0.72% VecNorm_Seq 5ms 0.0039% 89.47% 912ms 0.72% VecScale_Seq 3ms 0.0024% 89.47% 905ms 0.71% Element::Element 905ms 0.71% 90.18% 905ms 0.71% dscal_ 3ms 0.0024% 90.19% 886ms 0.7% AbstractTetrahedralElement::CalculateJacobian 1ms 0.00079% 90.19% 853ms 0.67% BidomainAssembler::ComputeMatrixTerm 11ms 0.0087% 90.19% 852ms 0.67% boost::numeric::ublas::c_matrix::c_matrix (inline) 3ms 0.0024% 90.20% 845ms 0.67% AbstractTetrahedralElement::AbstractTetrahedralElement 6ms 0.0047% 90.20% 822ms 0.65% AbstractBidomainSolver::FinaliseLinearSystem 3ms 0.0024% 90.20% 818ms 0.65% BidomainProblem::WriteOneStep 238ms 0.19% 90.39% 815ms 0.64% AbstractBidomainSolver::CheckCompatibilityCondition 743ms 0.59% 90.98% 743ms 0.59% __memset_avx2_unaligned_erms 0 0% 90.98% 733ms 0.58% PetscMemzero (inline) 702ms 0.55% 91.53% 702ms 0.55% log_inline (inline) 0 0% 91.53% 641ms 0.51% VecDuplicate