File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12764ms, 85.85% of 14867ms total Dropped 773 nodes (cum <= 74.33ms) flat flat% sum% cum cum% 0 0% 0% 14858ms 99.94% __libc_start_call_main 0 0% 0% 14858ms 99.94% __libc_start_main_impl 0 0% 0% 14858ms 99.94% _start 0 0% 0% 14855ms 99.92% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14855ms 99.92% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14855ms 99.92% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14855ms 99.92% main 0 0% 0% 14814ms 99.64% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14814ms 99.64% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14814ms 99.64% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 3ms 0.02% 0.02% 14792ms 99.50% AbstractCardiacProblem::Solve 3ms 0.02% 0.04% 11425ms 76.85% AbstractDynamicLinearPdeSolver::Solve 94ms 0.63% 0.67% 9015ms 60.64% AbstractCardiacTissue::SolveCellSystems 76ms 0.51% 1.18% 5348ms 35.97% AbstractCardiacCell::ComputeExceptVoltage 102ms 0.69% 1.87% 4714ms 31.71% AbstractOneStepIvpOdeSolver::InternalSolve 145ms 0.98% 2.85% 4026ms 27.08% EulerIvpOdeSolver::CalculateNextYValue 831ms 5.59% 8.43% 3838ms 25.82% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1855ms 12.48% 20.91% 3589ms 24.14% __GI___exp 1ms 0.0067% 20.92% 3293ms 22.15% MonodomainProblem::WriteOneStep 2ms 0.013% 20.93% 3146ms 21.16% Hdf5DataWriter::PutVector 1ms 0.0067% 20.94% 3142ms 21.13% H5Dwrite 1ms 0.0067% 20.95% 3107ms 20.90% H5D__write 115ms 0.77% 21.72% 2910ms 19.57% AbstractCardiacTissue::UpdateCaches (inline) 810ms 5.45% 27.17% 2731ms 18.37% CellLuoRudy1991FromCellML::GetIIonic 1ms 0.0067% 27.17% 1903ms 12.80% H5D__chunk_collective_write 9ms 0.061% 27.23% 1902ms 12.79% H5F_set_coll_metadata_reads 13ms 0.087% 27.32% 1703ms 11.45% H5FD_s3comms_uriencode 1354ms 9.11% 36.43% 1660ms 11.17% __ieee754_exp_fma 2ms 0.013% 36.44% 1618ms 10.88% LinearSystem::Solve 0 0% 36.44% 1496ms 10.06% KSPSolve 3ms 0.02% 36.46% 1496ms 10.06% KSPSolve_Private 1ms 0.0067% 36.47% 1489ms 10.02% KSPSolve_CG 2ms 0.013% 36.48% 1322ms 8.89% H5F_block_write 1ms 0.0067% 36.49% 1320ms 8.88% H5PB_write 1ms 0.0067% 36.50% 1319ms 8.87% H5F__accum_write 3ms 0.02% 36.52% 1318ms 8.87% H5FD_write 47ms 0.32% 36.83% 1312ms 8.82% 2ms 0.013% 36.85% 1236ms 8.31% H5D__mpio_select_write 7ms 0.047% 36.89% 1101ms 7.41% H5D__chunk_cacheable 1ms 0.0067% 36.90% 1096ms 7.37% PMPI_File_write_at_all 1073ms 7.22% 44.12% 1074ms 7.22% __GI_pwritev64 3ms 0.02% 44.14% 1032ms 6.94% std::pow (inline) 90ms 0.61% 44.74% 1027ms 6.91% __pow 313ms 2.11% 46.85% 956ms 6.43% H5S_select_iterate 79ms 0.53% 47.38% 937ms 6.30% __ieee754_pow_fma 2ms 0.013% 47.39% 874ms 5.88% PCApply 2ms 0.013% 47.41% 865ms 5.82% PCApply_BJacobi_Singleblock 0 0% 47.41% 835ms 5.62% KSPSolve_PREONLY 0 0% 47.41% 829ms 5.58% MatSolve 817ms 5.50% 52.90% 829ms 5.58% MatSolve_SeqSBAIJ_1_NaturalOrdering 0 0% 52.90% 829ms 5.58% PCApply_ICC 354ms 2.38% 55.28% 768ms 5.17% MonodomainSolver::SetupLinearSystem 64ms 0.43% 55.71% 647ms 4.35% H5D__chunk_set_sizes 0 0% 55.71% 619ms 4.16% KSP_PCApply.lto_priv.7 3ms 0.02% 55.73% 605ms 4.07% MatMult 597ms 4.02% 59.75% 602ms 4.05% MatMult_SeqAIJ 486ms 3.27% 63.02% 486ms 3.27% log_inline (inline) 63ms 0.42% 63.44% 467ms 3.14% H5S_mpio_space_type 190ms 1.28% 64.72% 461ms 3.10% CellLuoRudy1991FromCellML::VerifyStateVariables 324ms 2.18% 66.90% 332ms 2.23% exp_inline (inline) 0 0% 66.90% 308ms 2.07% KSPConvergedDefault 100ms 0.67% 67.57% 282ms 1.90% TimeStepper::TimeStepper 221ms 1.49% 69.06% 269ms 1.81% top12 (inline) 2ms 0.013% 69.07% 257ms 1.73% KSP_PCApply 234ms 1.57% 70.65% 234ms 1.57% [libchaste_heart.so] 42ms 0.28% 70.93% 227ms 1.53% __GI___libc_malloc 11ms 0.074% 71.00% 219ms 1.47% H5VM_chunk_index 182ms 1.22% 72.23% 210ms 1.41% _int_malloc 188ms 1.26% 73.49% 188ms 1.26% TimeStepper::CalculateNextTime 6ms 0.04% 73.53% 171ms 1.15% ompi_datatype_create 26ms 0.17% 73.71% 168ms 1.13% __GI___libc_free 13ms 0.087% 73.79% 168ms 1.13% ompi_datatype_destroy 57ms 0.38% 74.18% 167ms 1.12% AbstractCardiacCell::SetVoltage (partial-inline) 6ms 0.04% 74.22% 165ms 1.11% MPI_Type_free 110ms 0.74% 74.96% 160ms 1.08% AbstractOneStepIvpOdeSolver::Solve 1ms 0.0067% 74.96% 146ms 0.98% Hdf5DataWriter::PutUnlimitedVariable 146ms 0.98% 75.95% 146ms 0.98% ddot_ 51ms 0.34% 76.29% 142ms 0.96% _int_free 2ms 0.013% 76.30% 141ms 0.95% PMPI_File_set_view 39ms 0.26% 76.57% 138ms 0.93% ompi_datatype_release_args 3ms 0.02% 76.59% 138ms 0.93% ompi_info_register_framework_params 115ms 0.77% 77.36% 134ms 0.9% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 36ms 0.24% 77.60% 134ms 0.9% H5S_set_version 133ms 0.89% 78.50% 133ms 0.89% asuint64 (inline) 125ms 0.84% 79.34% 125ms 0.84% std::isinf (inline) 56ms 0.38% 79.71% 123ms 0.83% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 62ms 0.42% 80.13% 121ms 0.81% H5S_hyper_add_span_element 115ms 0.77% 80.90% 115ms 0.77% __memcpy_avx_unaligned_erms 111ms 0.75% 81.65% 111ms 0.75% __ieee754_log_fma 110ms 0.74% 82.39% 110ms 0.74% H5VM_chunk_index_scaled 2ms 0.013% 82.40% 105ms 0.71% VecNorm 92ms 0.62% 83.02% 104ms 0.7% AbstractParameterisedSystem::GetAnyVariable 4ms 0.027% 83.05% 103ms 0.69% PMPI_Type_create_resized 34ms 0.23% 83.28% 98ms 0.66% H5VM_array_calc 98ms 0.66% 83.94% 98ms 0.66% H5VM_array_offset_pre 0 0% 83.94% 97ms 0.65% VecNorm_Seq 2ms 0.013% 83.95% 96ms 0.65% ompi_datatype_duplicate 81ms 0.54% 84.50% 93ms 0.63% AbstractParameterisedSystem::SetAnyVariable 32ms 0.22% 84.71% 88ms 0.59% AbstractCardiacCell::GetVoltage (partial-inline) 0 0% 84.71% 87ms 0.59% VecDuplicate 2ms 0.013% 84.72% 87ms 0.59% VecDuplicate_MPI 31ms 0.21% 84.93% 87ms 0.59% ompi_datatype_set_args 0 0% 84.93% 86ms 0.58% std::vector::_M_assign_aux (inline) 0 0% 84.93% 86ms 0.58% std::vector::assign (inline) 85ms 0.57% 85.50% 85ms 0.57% ReplicatableVector::operator[] 49ms 0.33% 85.83% 85ms 0.57% TimeStepper::AdvanceOneTimeStep 3ms 0.02% 85.85% 79ms 0.53% PMPI_Type_vector