File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12851ms, 86.99% of 14773ms total Dropped 748 nodes (cum <= 73.86ms) flat flat% sum% cum cum% 0 0% 0% 14764ms 99.94% __libc_start_call_main 0 0% 0% 14764ms 99.94% __libc_start_main_impl 0 0% 0% 14764ms 99.94% _start 0 0% 0% 14761ms 99.92% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14761ms 99.92% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14761ms 99.92% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14761ms 99.92% main 0 0% 0% 14725ms 99.68% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14725ms 99.68% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14725ms 99.68% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 4ms 0.027% 0.027% 14703ms 99.53% AbstractCardiacProblem::Solve 2ms 0.014% 0.041% 10916ms 73.89% AbstractDynamicLinearPdeSolver::Solve 43ms 0.29% 0.33% 8682ms 58.77% AbstractCardiacTissue::SolveCellSystems 79ms 0.53% 0.87% 5353ms 36.24% AbstractCardiacCell::ComputeExceptVoltage 125ms 0.85% 1.71% 4796ms 32.46% AbstractOneStepIvpOdeSolver::InternalSolve 106ms 0.72% 2.43% 4096ms 27.73% EulerIvpOdeSolver::CalculateNextYValue 1038ms 7.03% 9.46% 3955ms 26.77% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1ms 0.0068% 9.46% 3725ms 25.21% MonodomainProblem::WriteOneStep 5ms 0.034% 9.50% 3551ms 24.04% Hdf5DataWriter::PutVector 5ms 0.034% 9.53% 3547ms 24.01% H5Dwrite 7ms 0.047% 9.58% 3514ms 23.79% H5D__write 1153ms 7.80% 17.38% 3094ms 20.94% __GI___exp 77ms 0.52% 17.90% 2532ms 17.14% AbstractCardiacTissue::UpdateCaches (inline) 830ms 5.62% 23.52% 2393ms 16.20% CellLuoRudy1991FromCellML::GetIIonic 1ms 0.0068% 23.53% 2185ms 14.79% H5D__chunk_collective_write 13ms 0.088% 23.62% 2184ms 14.78% H5F_set_coll_metadata_reads 13ms 0.088% 23.71% 1926ms 13.04% H5FD_s3comms_uriencode 2ms 0.014% 23.72% 1582ms 10.71% LinearSystem::Solve 0 0% 23.72% 1537ms 10.40% H5F_block_write 2ms 0.014% 23.73% 1537ms 10.40% H5PB_write 2ms 0.014% 23.75% 1535ms 10.39% H5FD_write 0 0% 23.75% 1535ms 10.39% H5F__accum_write 55ms 0.37% 24.12% 1533ms 10.38% 1ms 0.0068% 24.13% 1470ms 9.95% KSPSolve 9ms 0.061% 24.19% 1469ms 9.94% KSPSolve_Private 1467ms 9.93% 34.12% 1468ms 9.94% __ieee754_exp_fma 2ms 0.014% 34.13% 1459ms 9.88% H5D__mpio_select_write 3ms 0.02% 34.15% 1456ms 9.86% KSPSolve_CG 2ms 0.014% 34.16% 1334ms 9.03% PMPI_File_write_at_all 1296ms 8.77% 42.94% 1305ms 8.83% __GI_pwritev64 19ms 0.13% 43.07% 1221ms 8.27% H5D__chunk_cacheable 392ms 2.65% 45.72% 1035ms 7.01% H5S_select_iterate 11ms 0.074% 45.79% 869ms 5.88% std::pow (inline) 86ms 0.58% 46.38% 848ms 5.74% __pow 1ms 0.0068% 46.38% 761ms 5.15% PCApply 67ms 0.45% 46.84% 757ms 5.12% __ieee754_pow_fma 0 0% 46.84% 755ms 5.11% PCApply_BJacobi_Singleblock 1ms 0.0068% 46.84% 715ms 4.84% KSPSolve_PREONLY 1ms 0.0068% 46.85% 709ms 4.80% MatSolve 0 0% 46.85% 709ms 4.80% PCApply_ICC 700ms 4.74% 51.59% 708ms 4.79% MatSolve_SeqSBAIJ_1_NaturalOrdering 662ms 4.48% 56.07% 662ms 4.48% [libchaste_heart.so] 60ms 0.41% 56.47% 651ms 4.41% H5D__chunk_set_sizes 203ms 1.37% 57.85% 625ms 4.23% MonodomainSolver::SetupLinearSystem 3ms 0.02% 57.87% 598ms 4.05% MatMult 592ms 4.01% 61.88% 595ms 4.03% MatMult_SeqAIJ 394ms 2.67% 64.54% 585ms 3.96% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 64.54% 518ms 3.51% KSP_PCApply.lto_priv.7 492ms 3.33% 67.87% 492ms 3.33% [libm.so.6] 56ms 0.38% 68.25% 483ms 3.27% H5S_mpio_space_type 397ms 2.69% 70.94% 397ms 2.69% log_inline (inline) 109ms 0.74% 71.68% 327ms 2.21% TimeStepper::TimeStepper 5ms 0.034% 71.71% 319ms 2.16% KSPConvergedDefault 277ms 1.88% 73.59% 283ms 1.92% exp_inline (inline) 30ms 0.2% 73.79% 250ms 1.69% H5VM_chunk_index 2ms 0.014% 73.80% 245ms 1.66% KSP_PCApply 105ms 0.71% 74.51% 223ms 1.51% __GI___libc_malloc 222ms 1.50% 76.02% 222ms 1.50% TimeStepper::CalculateNextTime 9ms 0.061% 76.08% 207ms 1.40% ompi_datatype_create 4ms 0.027% 76.11% 188ms 1.27% MPI_Type_free 188ms 1.27% 77.38% 188ms 1.27% ddot_ 20ms 0.14% 77.51% 186ms 1.26% __GI___libc_free 14ms 0.095% 77.61% 186ms 1.26% ompi_datatype_destroy 184ms 1.25% 78.85% 184ms 1.25% H5VM_chunk_index_scaled 2ms 0.014% 78.87% 173ms 1.17% Hdf5DataWriter::PutUnlimitedVariable 88ms 0.6% 79.46% 166ms 1.12% _int_free 44ms 0.3% 79.76% 157ms 1.06% ompi_datatype_release_args 4ms 0.027% 79.79% 157ms 1.06% ompi_info_register_framework_params 145ms 0.98% 80.77% 145ms 0.98% __ieee754_log_fma 38ms 0.26% 81.03% 144ms 0.97% AbstractCardiacCell::SetVoltage (partial-inline) 85ms 0.58% 81.60% 137ms 0.93% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 1ms 0.0068% 81.61% 137ms 0.93% PMPI_File_set_view 134ms 0.91% 82.52% 134ms 0.91% [libchaste_ode.so] 99ms 0.67% 83.19% 134ms 0.91% _int_malloc 96ms 0.65% 83.84% 126ms 0.85% AbstractOneStepIvpOdeSolver::Solve 25ms 0.17% 84.00% 126ms 0.85% H5S_set_version 55ms 0.37% 84.38% 120ms 0.81% H5S_hyper_add_span_element 0 0% 84.38% 119ms 0.81% VecNorm 0 0% 84.38% 114ms 0.77% VecNorm_Seq 82ms 0.56% 84.93% 114ms 0.77% __libc_calloc 1ms 0.0068% 84.94% 112ms 0.76% VecTDot 3ms 0.02% 84.96% 111ms 0.75% ompi_datatype_duplicate 0 0% 84.96% 108ms 0.73% VecTDot_Seq 1ms 0.0068% 84.97% 108ms 0.73% VecXDot_Seq_Private.constprop.0 1ms 0.0068% 84.97% 105ms 0.71% PMPI_Type_create_resized 46ms 0.31% 85.28% 101ms 0.68% H5VM_array_calc 0 0% 85.28% 101ms 0.68% opal_datatype_create_desc 0 0% 85.28% 87ms 0.59% VecDuplicate 2ms 0.014% 85.30% 87ms 0.59% VecDuplicate_MPI 34ms 0.23% 85.53% 82ms 0.56% std::__cxx11::basic_string::basic_string 66ms 0.45% 85.97% 81ms 0.55% AbstractParameterisedSystem::GetAnyVariable 81ms 0.55% 86.52% 81ms 0.55% __memcpy_evex_unaligned_erms 27ms 0.18% 86.71% 80ms 0.54% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 5ms 0.034% 86.74% 79ms 0.53% MPI_Type_create_hindexed 37ms 0.25% 86.99% 76ms 0.51% TimeStepper::AdvanceOneTimeStep