File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 386ms, 87.53% of 441ms total Dropped 214 nodes (cum <= 2.21ms) flat flat% sum% cum cum% 0 0% 0% 433ms 98.19% __libc_start_call_main 0 0% 0% 433ms 98.19% __libc_start_main_impl 0 0% 0% 433ms 98.19% _start 0 0% 0% 430ms 97.51% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 430ms 97.51% CxxTest::TestRunner::runAllTests 0 0% 0% 430ms 97.51% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 430ms 97.51% main 0 0% 0% 394ms 89.34% CxxTest::RealTestDescription::run 0 0% 0% 394ms 89.34% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 394ms 89.34% CxxTest::TestRunner::runTest (inline) 0 0% 0% 394ms 89.34% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 394ms 89.34% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 389ms 88.21% AbstractCardiacProblem::Solve 0 0% 0% 387ms 87.76% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 359ms 81.41% KSPSolve 0 0% 0% 359ms 81.41% KSPSolve_Private 0 0% 0% 359ms 81.41% LinearSystem::Solve 0 0% 0% 358ms 81.18% KSPSolve_CG 0 0% 0% 224ms 50.79% KSP_PCApply.lto_priv.7 0 0% 0% 210ms 47.62% PCApply 0 0% 0% 210ms 47.62% PCApply_BJacobi_Singleblock 0 0% 0% 174ms 39.46% KSPSolve_PREONLY (partial-inline) 0 0% 0% 162ms 36.73% MatSolve 162ms 36.73% 36.73% 162ms 36.73% MatSolve_SeqSBAIJ_1_NaturalOrdering 0 0% 36.73% 162ms 36.73% PCApply_ICC 0 0% 36.73% 58ms 13.15% MatMult 1ms 0.23% 36.96% 58ms 13.15% MatMult_SeqAIJ (partial-inline) 57ms 12.93% 49.89% 58ms 13.15% MatMult_SeqAIJ_Inode (inline) 56ms 12.70% 62.59% 56ms 12.70% ddot_ 1ms 0.23% 62.81% 43ms 9.75% MatNullSpaceRemove 0 0% 62.81% 36ms 8.16% VecTDot 0 0% 62.81% 36ms 8.16% VecTDot_Seq 0 0% 62.81% 36ms 8.16% VecXDot_Seq_Private.constprop.0 0 0% 62.81% 32ms 7.26% CxxTest::RealWorldDescription::setUp 0 0% 62.81% 32ms 7.26% PetscInitialize 0 0% 62.81% 32ms 7.26% PetscSetup::setUpWorld 0 0% 62.81% 32ms 7.26% PetscSetupUtils::CommonSetup 0 0% 62.81% 32ms 7.26% PetscSetupUtils::InitialisePetsc 0 0% 62.81% 31ms 7.03% PMPI_Init_thread 0 0% 62.81% 31ms 7.03% ompi_mpi_init 0 0% 62.81% 24ms 5.44% AbstractCardiacTissue::SolveCellSystems 0 0% 62.81% 23ms 5.22% 0 0% 62.81% 23ms 5.22% VecMAXPY 22ms 4.99% 67.80% 23ms 5.22% VecMAXPY_Seq 0 0% 67.80% 22ms 4.99% orte_init 0 0% 67.80% 20ms 4.54% VecNorm 0 0% 67.80% 20ms 4.54% VecNorm_Seq 0 0% 67.80% 19ms 4.31% VecMDot 19ms 4.31% 72.11% 19ms 4.31% VecMDot_Seq 0 0% 72.11% 19ms 4.31% VecMXDot_Private 0 0% 72.11% 16ms 3.63% AbstractCardiacCell::ComputeExceptVoltage 0 0% 72.11% 16ms 3.63% KSP_PCApply (partial-inline) 0 0% 72.11% 14ms 3.17% __GI__dl_catch_exception 0 0% 72.11% 14ms 3.17% _dl_catch_error 0 0% 72.11% 14ms 3.17% _dlerror_run 0 0% 72.11% 13ms 2.95% hwloc_topology_load 0 0% 72.11% 13ms 2.95% opal_stackframe_output 0 0% 72.11% 12ms 2.72% mca_base_framework_open 0 0% 72.11% 11ms 2.49% ___dlopen 0 0% 72.11% 11ms 2.49% _dl_open 0 0% 72.11% 11ms 2.49% dlopen_doit 0 0% 72.11% 11ms 2.49% dlopen_implementation (inline) 1ms 0.23% 72.34% 11ms 2.49% hwloc_linux_get_tid_last_cpu_location 0 0% 72.34% 11ms 2.49% mca_base_framework_components_register 0 0% 72.34% 11ms 2.49% mca_base_framework_register 0 0% 72.34% 10ms 2.27% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 72.34% 10ms 2.27% mca_base_component_find 0 0% 72.34% 10ms 2.27% mca_base_component_repository_open 1ms 0.23% 72.56% 9ms 2.04% EulerIvpOdeSolver::CalculateNextYValue 0 0% 72.56% 9ms 2.04% VecAYPX 9ms 2.04% 74.60% 9ms 2.04% VecAYPX_Seq 0 0% 74.60% 9ms 2.04% VecDuplicate 0 0% 74.60% 9ms 2.04% VecDuplicate_Seq 0 0% 74.60% 9ms 2.04% dl_open_worker 0 0% 74.60% 9ms 2.04% dl_open_worker_begin 1ms 0.23% 74.83% 8ms 1.81% CellLuoRudy1991FromCellML::EvaluateYDerivatives 4ms 0.91% 75.74% 8ms 1.81% __GI___exp 0 0% 75.74% 7ms 1.59% AbstractCardiacTissue::UpdateCaches (inline) 5ms 1.13% 76.87% 7ms 1.59% CellLuoRudy1991FromCellML::GetIIonic 0 0% 76.87% 7ms 1.59% VecAXPY 0 0% 76.87% 7ms 1.59% VecAXPY_Seq 0 0% 76.87% 7ms 1.59% _dl_init 0 0% 76.87% 7ms 1.59% _dl_start_user 2ms 0.45% 77.32% 7ms 1.59% boost::serialization::singleton::get_instance 0 0% 77.32% 7ms 1.59% call_init (inline) 7ms 1.59% 78.91% 7ms 1.59% daxpy_ 0 0% 78.91% 6ms 1.36% VecDestroy 6ms 1.36% 80.27% 6ms 1.36% __memset_avx2_unaligned_erms 0 0% 80.27% 6ms 1.36% _dl_map_object 0 0% 80.27% 6ms 1.36% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 80.27% 5ms 1.13% VecCreate 5ms 1.13% 81.41% 5ms 1.13% __GI___libc_read 0 0% 81.41% 5ms 1.13% opal_hwloc_base_get_topology 0 0% 81.41% 5ms 1.13% orte_ess_base_proc_binding 0 0% 81.41% 4ms 0.91% AbstractCardiacProblem::Initialise 0 0% 81.41% 4ms 0.91% BidomainSolver::SetupLinearSystem 0 0% 81.41% 4ms 0.91% CxxTest::RealWorldDescription::tearDown 0 0% 81.41% 4ms 0.91% KSPConvergedDefault 0 0% 81.41% 4ms 0.91% PetscFinalize 1ms 0.23% 81.63% 4ms 0.91% PetscHeaderDestroy_Private 0 0% 81.63% 4ms 0.91% PetscMallocA 0 0% 81.63% 4ms 0.91% PetscMallocAlign (partial-inline) 0 0% 81.63% 4ms 0.91% PetscMemzero (inline) 0 0% 81.63% 4ms 0.91% PetscSetup::tearDownWorld 0 0% 81.63% 4ms 0.91% PetscSetupUtils::CommonFinalize 0 0% 81.63% 4ms 0.91% VecSetType 1ms 0.23% 81.86% 4ms 0.91% __cxa_finalize 4ms 0.91% 82.77% 4ms 0.91% __ieee754_exp_fma 0 0% 82.77% 4ms 0.91% _dl_call_fini 0 0% 82.77% 4ms 0.91% _dl_lookup_symbol_x 1ms 0.23% 82.99% 4ms 0.91% _dl_map_object_from_fd 0 0% 82.99% 4ms 0.91% ompi_mpi_finalize 2ms 0.45% 83.45% 3ms 0.68% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 0 0% 83.45% 3ms 0.68% DistributedTetrahedralMesh::ConstructFromMeshReader 1ms 0.23% 83.67% 3ms 0.68% KSPSetUpOnBlocks 0 0% 83.67% 3ms 0.68% VecCreate_Seq 0 0% 83.67% 3ms 0.68% XOpenDisplay 0 0% 83.67% 3ms 0.68% [hwloc_gl.so] 0 0% 83.67% 3ms 0.68% [libxcb.so.1.1.0] 0 0% 83.67% 3ms 0.68% _XConnectXCB 1ms 0.23% 83.90% 3ms 0.68% __GI___libc_malloc 3ms 0.68% 84.58% 3ms 0.68% __GI___open64_nocancel 0 0% 84.58% 3ms 0.68% __GI_exit 0 0% 84.58% 3ms 0.68% __GI_getaddrinfo 0 0% 84.58% 3ms 0.68% __dlclose 3ms 0.68% 85.26% 3ms 0.68% __mmap64 0 0% 85.26% 3ms 0.68% __run_exit_handlers 0 0% 85.26% 3ms 0.68% _dl_close 1ms 0.23% 85.49% 3ms 0.68% _dl_close_worker (inline) 0 0% 85.49% 3ms 0.68% _dl_fini 0 0% 85.49% 3ms 0.68% _dl_map_segments (inline) 1ms 0.23% 85.71% 3ms 0.68% _dl_runtime_resolve_xsavec 3ms 0.68% 86.39% 3ms 0.68% _int_malloc 0 0% 86.39% 3ms 0.68% boost::archive::detail::pointer_iserializer::pointer_iserializer (inline) 1ms 0.23% 86.62% 3ms 0.68% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 1ms 0.23% 86.85% 3ms 0.68% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 86.85% 3ms 0.68% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 3ms 0.68% 87.53% 3ms 0.68% do_lookup_x 0 0% 87.53% 3ms 0.68% mca_base_component_repository_release 0 0% 87.53% 3ms 0.68% mca_base_framework_close 0 0% 87.53% 3ms 0.68% xcb_connect_to_display_with_auth_info