File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 110819ms, 91.94% of 120540ms total Dropped 1124 nodes (cum <= 602.70ms) flat flat% sum% cum cum% 0 0% 0% 120526ms 100% __libc_start_call_main 0 0% 0% 120526ms 100% __libc_start_main_impl 0 0% 0% 120526ms 100% _start 0 0% 0% 120523ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 120523ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 120523ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 120523ms 100% main 0 0% 0% 120486ms 100% AbstractConvergenceTester::Converge 0 0% 0% 120486ms 100% CxxTest::RealTestDescription::run 0 0% 0% 120486ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 120486ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 120486ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 120486ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 6ms 0.005% 0.005% 119234ms 98.92% AbstractCardiacProblem::Solve 5ms 0.0041% 0.0091% 118460ms 98.27% AbstractDynamicLinearPdeSolver::Solve 5ms 0.0041% 0.013% 66838ms 55.45% LinearSystem::Solve 4ms 0.0033% 0.017% 66370ms 55.06% KSPSolve 10ms 0.0083% 0.025% 66366ms 55.06% KSPSolve_Private 6ms 0.005% 0.03% 65945ms 54.71% KSPSolve_SYMMLQ 216ms 0.18% 0.21% 42588ms 35.33% AbstractCardiacTissue::SolveCellSystems 5ms 0.0041% 0.21% 37530ms 31.13% PCApply 2ms 0.0017% 0.21% 37519ms 31.13% PCApply_BJacobi_Singleblock 4ms 0.0033% 0.22% 34848ms 28.91% KSPSolve_PREONLY (partial-inline) 4ms 0.0033% 0.22% 33695ms 27.95% PCApply_ICC 8ms 0.0066% 0.23% 33691ms 27.95% MatSolve 33179ms 27.53% 27.75% 33683ms 27.94% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1385ms 1.15% 28.90% 32657ms 27.09% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 1ms 0.00083% 28.90% 32452ms 26.92% KSP_PCApply.lto_priv.18 6910ms 5.73% 34.64% 28098ms 23.31% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 6ms 0.005% 34.64% 22686ms 18.82% MatMult 300ms 0.25% 34.89% 22680ms 18.82% MatMult_SeqAIJ (partial-inline) 22163ms 18.39% 53.28% 22679ms 18.81% MatMult_SeqAIJ_Inode (inline) 1996ms 1.66% 54.93% 14501ms 12.03% CardiacNewtonSolver::Solve 318ms 0.26% 55.20% 9113ms 7.56% AbstractCardiacTissue::UpdateCaches (inline) 1876ms 1.56% 56.75% 8595ms 7.13% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 4364ms 3.62% 60.37% 8526ms 7.07% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1103ms 0.92% 61.29% 8050ms 6.68% BidomainSolver::SetupLinearSystem 1168ms 0.97% 62.26% 7300ms 6.06% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 1ms 0.00083% 62.26% 7113ms 5.90% KSP_PCApply (partial-inline) 5ms 0.0041% 62.26% 6449ms 5.35% KSPConvergedDefault 5867ms 4.87% 67.13% 5867ms 4.87% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3858ms 3.20% 70.33% 3894ms 3.23% __ieee754_log_fma 0 0% 70.33% 3603ms 2.99% boost::numeric::ublas::norm_inf (inline) 2431ms 2.02% 72.35% 3603ms 2.99% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 72.35% 3603ms 2.99% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 72.35% 3603ms 2.99% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 6ms 0.005% 72.35% 3462ms 2.87% MatNullSpaceRemove 3301ms 2.74% 75.09% 3301ms 2.74% __memcpy_avx_unaligned_erms 0 0% 75.09% 3265ms 2.71% PetscMemcpy (inline) 20ms 0.017% 75.11% 3225ms 2.68% std::pow (inline) 412ms 0.34% 75.45% 3195ms 2.65% __pow 1746ms 1.45% 76.90% 2982ms 2.47% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 27ms 0.022% 76.92% 2802ms 2.32% VecCopy 363ms 0.3% 77.22% 2773ms 2.30% __ieee754_pow_fma 1ms 0.00083% 77.22% 2771ms 2.30% VecCopy_Seq (partial-inline) 2706ms 2.24% 79.47% 2706ms 2.24% ddot_ 20ms 0.017% 79.48% 2558ms 2.12% VecAXPY 9ms 0.0075% 79.49% 2538ms 2.11% VecAXPY_Seq 2513ms 2.08% 81.57% 2513ms 2.08% daxpy_ 3ms 0.0025% 81.58% 2224ms 1.85% VecDot 0 0% 81.58% 2221ms 1.84% VecDot_Seq 1ms 0.00083% 81.58% 2221ms 1.84% VecXDot_Seq_Private.constprop.0 1ms 0.00083% 81.58% 2088ms 1.73% AbstractFeVolumeIntegralAssembler::DoAssemble 3ms 0.0025% 81.58% 1987ms 1.65% VecMDot 7ms 0.0058% 81.59% 1984ms 1.65% VecMXDot_Private 1969ms 1.63% 83.22% 1975ms 1.64% VecMDot_Seq 37ms 0.031% 83.25% 1728ms 1.43% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1660ms 1.38% 84.63% 1718ms 1.43% exp_inline (inline) 5ms 0.0041% 84.63% 1469ms 1.22% VecMAXPY 1457ms 1.21% 85.84% 1464ms 1.21% VecMAXPY_Seq 1460ms 1.21% 87.05% 1460ms 1.21% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 0 0% 87.05% 1429ms 1.19% AbstractFeAssemblerInterface::AssembleMatrix (inline) 1162ms 0.96% 88.02% 1162ms 0.96% __memset_avx2_unaligned_erms 0 0% 88.02% 1152ms 0.96% PetscMemzero (inline) 841ms 0.7% 88.71% 1125ms 0.93% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 11ms 0.0091% 88.72% 1115ms 0.93% boost::numeric::ublas::matrix_assign (inline) 0 0% 88.72% 1106ms 0.92% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 88.72% 1106ms 0.92% CuboidMeshConstructor::Construct 0 0% 88.72% 1106ms 0.92% DistributedTetrahedralMesh::ConstructCuboid 223ms 0.19% 88.91% 1096ms 0.91% boost::numeric::ublas::indexing_matrix_assign 0 0% 88.91% 1083ms 0.9% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 88.91% 1083ms 0.9% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 88.91% 1083ms 0.9% boost_numeric_ublas_abs (inline) 1083ms 0.9% 89.81% 1083ms 0.9% std::abs (inline) 0 0% 89.81% 1006ms 0.83% Element::Element 2ms 0.0017% 89.81% 1004ms 0.83% AbstractTetrahedralElement::CalculateJacobian 2ms 0.0017% 89.81% 950ms 0.79% AbstractTetrahedralElement::AbstractTetrahedralElement 3ms 0.0025% 89.81% 918ms 0.76% VecDuplicate 6ms 0.005% 89.82% 863ms 0.72% BidomainAssembler::ComputeMatrixTerm 855ms 0.71% 90.53% 855ms 0.71% [libchaste_heart.so] 6ms 0.005% 90.53% 831ms 0.69% boost::numeric::ublas::c_matrix::c_matrix (inline) 4ms 0.0033% 90.54% 827ms 0.69% VecScale 2ms 0.0017% 90.54% 823ms 0.68% VecScale_Seq 818ms 0.68% 91.22% 818ms 0.68% dscal_ 15ms 0.012% 91.23% 782ms 0.65% PetscMallocA 6ms 0.005% 91.23% 767ms 0.64% PetscMallocAlign (partial-inline) 0 0% 91.23% 751ms 0.62% VecNorm 5ms 0.0041% 91.24% 745ms 0.62% VecNorm_Seq 2ms 0.0017% 91.24% 715ms 0.59% BidomainProblem::WriteOneStep 182ms 0.15% 91.39% 683ms 0.57% AbstractBidomainSolver::CheckCompatibilityCondition 0 0% 91.39% 683ms 0.57% AbstractBidomainSolver::FinaliseLinearSystem 0 0% 91.39% 659ms 0.55% AbstractFeAssemblerInterface::Assemble (inline) 658ms 0.55% 91.94% 658ms 0.55% log_inline (inline)