File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12956ms, 86.52% of 14975ms total Dropped 757 nodes (cum <= 74.88ms) flat flat% sum% cum cum% 0 0% 0% 14968ms 100% __libc_start_call_main 0 0% 0% 14968ms 100% __libc_start_main_impl 0 0% 0% 14968ms 100% _start 0 0% 0% 14965ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14965ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14965ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14965ms 99.93% main 0 0% 0% 14930ms 99.70% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14930ms 99.70% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14930ms 99.70% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 1ms 0.0067% 0.0067% 14908ms 99.55% AbstractCardiacProblem::Solve 1ms 0.0067% 0.013% 11659ms 77.86% AbstractDynamicLinearPdeSolver::Solve 29ms 0.19% 0.21% 9299ms 62.10% AbstractCardiacTissue::SolveCellSystems 150ms 1.00% 1.21% 5749ms 38.39% AbstractCardiacCell::ComputeExceptVoltage 124ms 0.83% 2.04% 4809ms 32.11% AbstractOneStepIvpOdeSolver::InternalSolve 204ms 1.36% 3.40% 4173ms 27.87% EulerIvpOdeSolver::CalculateNextYValue 846ms 5.65% 9.05% 3901ms 26.05% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1661ms 11.09% 20.14% 3557ms 23.75% __GI___exp 3ms 0.02% 20.16% 3191ms 21.31% MonodomainProblem::WriteOneStep 3ms 0.02% 20.18% 3054ms 20.39% Hdf5DataWriter::PutVector 1ms 0.0067% 20.19% 3027ms 20.21% H5Dwrite 3ms 0.02% 20.21% 2991ms 19.97% H5D__write 96ms 0.64% 20.85% 2740ms 18.30% AbstractCardiacTissue::UpdateCaches (inline) 893ms 5.96% 26.81% 2604ms 17.39% CellLuoRudy1991FromCellML::GetIIonic 1642ms 10.96% 37.78% 1806ms 12.06% __ieee754_exp_fma 1ms 0.0067% 37.78% 1751ms 11.69% H5D__chunk_collective_write 21ms 0.14% 37.92% 1750ms 11.69% H5F_set_coll_metadata_reads 0 0% 37.92% 1576ms 10.52% LinearSystem::Solve 12ms 0.08% 38.00% 1544ms 10.31% H5FD_s3comms_uriencode 0 0% 38.00% 1439ms 9.61% KSPSolve 3ms 0.02% 38.02% 1439ms 9.61% KSPSolve_Private 2ms 0.013% 38.04% 1422ms 9.50% KSPSolve_CG 55ms 0.37% 38.40% 1162ms 7.76% 3ms 0.02% 38.42% 1156ms 7.72% H5F_block_write 2ms 0.013% 38.44% 1153ms 7.70% H5PB_write 1ms 0.0067% 38.44% 1151ms 7.69% H5F__accum_write 0 0% 38.44% 1150ms 7.68% H5FD_write 8ms 0.053% 38.50% 1144ms 7.64% H5D__chunk_cacheable 0 0% 38.50% 1069ms 7.14% H5D__mpio_select_write 383ms 2.56% 41.06% 989ms 6.60% H5S_select_iterate 0 0% 41.06% 973ms 6.50% PMPI_File_write_at_all 950ms 6.34% 47.40% 952ms 6.36% __GI_pwritev64 8ms 0.053% 47.45% 883ms 5.90% std::pow (inline) 97ms 0.65% 48.10% 874ms 5.84% __pow 4ms 0.027% 48.13% 776ms 5.18% PCApply 111ms 0.74% 48.87% 776ms 5.18% __ieee754_pow_fma 0 0% 48.87% 773ms 5.16% PCApply_BJacobi_Singleblock 299ms 2.00% 50.86% 763ms 5.10% MonodomainSolver::SetupLinearSystem 0 0% 50.86% 734ms 4.90% KSPSolve_PREONLY 2ms 0.013% 50.88% 732ms 4.89% PCApply_ICC 1ms 0.0067% 50.88% 730ms 4.87% MatSolve 714ms 4.77% 55.65% 729ms 4.87% MatSolve_SeqSBAIJ_1_NaturalOrdering 3ms 0.02% 55.67% 685ms 4.57% MatMult 677ms 4.52% 60.19% 682ms 4.55% MatMult_SeqAIJ 296ms 1.98% 62.17% 648ms 4.33% CellLuoRudy1991FromCellML::VerifyStateVariables 72ms 0.48% 62.65% 623ms 4.16% H5D__chunk_set_sizes 0 0% 62.65% 539ms 3.60% KSP_PCApply.lto_priv.7 48ms 0.32% 62.97% 482ms 3.22% H5S_mpio_space_type 352ms 2.35% 65.32% 352ms 2.35% log_inline (inline) 315ms 2.10% 67.43% 339ms 2.26% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 6ms 0.04% 67.47% 306ms 2.04% KSPConvergedDefault 277ms 1.85% 69.32% 279ms 1.86% exp_inline (inline) 0 0% 69.32% 238ms 1.59% KSP_PCApply 126ms 0.84% 70.16% 232ms 1.55% TimeStepper::TimeStepper 55ms 0.37% 70.52% 218ms 1.46% __GI___libc_malloc 22ms 0.15% 70.67% 209ms 1.40% H5VM_chunk_index 107ms 0.71% 71.39% 198ms 1.32% top12 (inline) 195ms 1.30% 72.69% 195ms 1.30% __ieee754_log_fma 102ms 0.68% 73.37% 192ms 1.28% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 159ms 1.06% 74.43% 192ms 1.28% _int_malloc 9ms 0.06% 74.49% 183ms 1.22% ompi_datatype_create 182ms 1.22% 75.71% 182ms 1.22% [libchaste_heart.so] 33ms 0.22% 75.93% 165ms 1.10% __GI___libc_free 33ms 0.22% 76.15% 162ms 1.08% AbstractCardiacCell::SetVoltage (partial-inline) 161ms 1.08% 77.22% 161ms 1.08% std::isinf (inline) 5ms 0.033% 77.26% 144ms 0.96% MPI_Type_free 3ms 0.02% 77.28% 143ms 0.95% ompi_datatype_destroy 27ms 0.18% 77.46% 135ms 0.9% H5S_set_version 1ms 0.0067% 77.46% 134ms 0.89% Hdf5DataWriter::PutUnlimitedVariable 133ms 0.89% 78.35% 133ms 0.89% ddot_ 46ms 0.31% 78.66% 131ms 0.87% _int_free 9ms 0.06% 78.72% 130ms 0.87% ompi_info_register_framework_params 78ms 0.52% 79.24% 130ms 0.87% std::__cxx11::basic_string::basic_string 29ms 0.19% 79.43% 129ms 0.86% ompi_datatype_release_args 126ms 0.84% 80.27% 126ms 0.84% __memcpy_avx_unaligned_erms 5ms 0.033% 80.31% 121ms 0.81% PMPI_Type_create_resized 85ms 0.57% 80.87% 113ms 0.75% AbstractOneStepIvpOdeSolver::Solve 1ms 0.0067% 80.88% 113ms 0.75% PMPI_File_set_view 1ms 0.0067% 80.89% 112ms 0.75% VecDuplicate 5ms 0.033% 80.92% 111ms 0.74% VecDuplicate_MPI 110ms 0.73% 81.66% 110ms 0.73% TimeStepper::CalculateNextTime 53ms 0.35% 82.01% 108ms 0.72% H5VM_array_calc 0 0% 82.01% 106ms 0.71% ompi_datatype_duplicate 92ms 0.61% 82.62% 100ms 0.67% AbstractParameterisedSystem::SetAnyVariable 75ms 0.5% 83.13% 99ms 0.66% AbstractParameterisedSystem::GetAnyVariable 96ms 0.64% 83.77% 96ms 0.64% H5VM_chunk_index_scaled 1ms 0.0067% 83.77% 95ms 0.63% VecNorm 93ms 0.62% 84.39% 93ms 0.62% H5VM_array_offset_pre 93ms 0.62% 85.02% 93ms 0.62% asuint64 (inline) 49ms 0.33% 85.34% 92ms 0.61% H5S_hyper_add_span_element 92ms 0.61% 85.96% 92ms 0.61% [libm.so.6] 2ms 0.013% 85.97% 91ms 0.61% VecNorm_Seq 3ms 0.02% 85.99% 83ms 0.55% opal_datatype_create_desc 29ms 0.19% 86.18% 78ms 0.52% __libc_calloc 50ms 0.33% 86.52% 75ms 0.5% TimeStepper::AdvanceOneTimeStep