File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12604ms, 88.47% of 14247ms total Dropped 722 nodes (cum <= 71.23ms) flat flat% sum% cum cum% 0 0% 0% 14237ms 99.93% __libc_start_call_main 0 0% 0% 14237ms 99.93% __libc_start_main_impl 0 0% 0% 14237ms 99.93% _start 0 0% 0% 14234ms 99.91% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14234ms 99.91% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14234ms 99.91% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14234ms 99.91% main 0 0% 0% 14199ms 99.66% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14199ms 99.66% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14199ms 99.66% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 1ms 0.007% 0.007% 14178ms 99.52% AbstractCardiacProblem::Solve 0 0% 0.007% 10894ms 76.47% AbstractDynamicLinearPdeSolver::Solve 84ms 0.59% 0.6% 8468ms 59.44% AbstractCardiacTissue::SolveCellSystems 64ms 0.45% 1.05% 5223ms 36.66% AbstractCardiacCell::ComputeExceptVoltage 100ms 0.7% 1.75% 4730ms 33.20% AbstractOneStepIvpOdeSolver::InternalSolve 143ms 1.00% 2.75% 4080ms 28.64% EulerIvpOdeSolver::CalculateNextYValue 985ms 6.91% 9.67% 3897ms 27.35% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 9.67% 3214ms 22.56% MonodomainProblem::WriteOneStep 2ms 0.014% 9.68% 3139ms 22.03% Hdf5DataWriter::PutVector 1120ms 7.86% 17.54% 3106ms 21.80% __GI___exp 0 0% 17.54% 3076ms 21.59% H5Dwrite 2ms 0.014% 17.55% 3049ms 21.40% H5D__write 104ms 0.73% 18.28% 2336ms 16.40% AbstractCardiacTissue::UpdateCaches (inline) 624ms 4.38% 22.66% 2156ms 15.13% CellLuoRudy1991FromCellML::GetIIonic 0 0% 22.66% 1881ms 13.20% H5D__chunk_collective_write 12ms 0.084% 22.75% 1881ms 13.20% H5F_set_coll_metadata_reads 1687ms 11.84% 34.59% 1711ms 12.01% __ieee754_exp_fma 7ms 0.049% 34.64% 1617ms 11.35% H5FD_s3comms_uriencode 0 0% 34.64% 1457ms 10.23% LinearSystem::Solve 0 0% 34.64% 1378ms 9.67% KSPSolve 2ms 0.014% 34.65% 1378ms 9.67% KSPSolve_Private 1ms 0.007% 34.66% 1372ms 9.63% KSPSolve_CG 21ms 0.15% 34.81% 1300ms 9.12% 0 0% 34.81% 1280ms 8.98% H5F_block_write 1ms 0.007% 34.81% 1280ms 8.98% H5PB_write 0 0% 34.81% 1279ms 8.98% H5FD_write 0 0% 34.81% 1279ms 8.98% H5F__accum_write 0 0% 34.81% 1220ms 8.56% H5D__mpio_select_write 0 0% 34.81% 1178ms 8.27% PMPI_File_write_at_all 1155ms 8.11% 42.92% 1163ms 8.16% __GI_pwritev64 4ms 0.028% 42.95% 1111ms 7.80% H5D__chunk_cacheable 327ms 2.30% 45.24% 956ms 6.71% H5S_select_iterate 345ms 2.42% 47.67% 953ms 6.69% MonodomainSolver::SetupLinearSystem 19ms 0.13% 47.80% 875ms 6.14% std::pow (inline) 42ms 0.29% 48.09% 841ms 5.90% __pow 61ms 0.43% 48.52% 793ms 5.57% __ieee754_pow_fma 3ms 0.021% 48.54% 772ms 5.42% PCApply 1ms 0.007% 48.55% 770ms 5.40% PCApply_BJacobi_Singleblock 1ms 0.007% 48.56% 745ms 5.23% KSPSolve_PREONLY 0 0% 48.56% 741ms 5.20% MatSolve 737ms 5.17% 53.73% 741ms 5.20% MatSolve_SeqSBAIJ_1_NaturalOrdering 0 0% 53.73% 741ms 5.20% PCApply_ICC 466ms 3.27% 57.00% 709ms 4.98% CellLuoRudy1991FromCellML::VerifyStateVariables 60ms 0.42% 57.42% 647ms 4.54% H5D__chunk_set_sizes 4ms 0.028% 57.45% 636ms 4.46% MatMult 629ms 4.41% 61.87% 632ms 4.44% MatMult_SeqAIJ 627ms 4.40% 66.27% 627ms 4.40% [libchaste_heart.so] 0 0% 66.27% 545ms 3.83% KSP_PCApply.lto_priv.7 63ms 0.44% 66.71% 429ms 3.01% H5S_mpio_space_type 316ms 2.22% 68.93% 378ms 2.65% exp_inline (inline) 351ms 2.46% 71.39% 351ms 2.46% log_inline (inline) 298ms 2.09% 73.48% 298ms 2.09% [libm.so.6] 3ms 0.021% 73.50% 294ms 2.06% KSPConvergedDefault 32ms 0.22% 73.73% 282ms 1.98% H5VM_chunk_index 94ms 0.66% 74.39% 280ms 1.97% TimeStepper::TimeStepper 0 0% 74.39% 228ms 1.60% KSP_PCApply 19ms 0.13% 74.52% 226ms 1.59% __GI___libc_free 23ms 0.16% 74.68% 225ms 1.58% ompi_datatype_destroy 4ms 0.028% 74.71% 220ms 1.54% MPI_Type_free 216ms 1.52% 76.23% 216ms 1.52% H5VM_chunk_index_scaled 119ms 0.84% 77.06% 207ms 1.45% _int_free 47ms 0.33% 77.39% 188ms 1.32% ompi_datatype_release_args 5ms 0.035% 77.43% 188ms 1.32% ompi_info_register_framework_params 87ms 0.61% 78.04% 186ms 1.31% __GI___libc_malloc 179ms 1.26% 79.29% 179ms 1.26% TimeStepper::CalculateNextTime 5ms 0.035% 79.33% 159ms 1.12% ompi_datatype_create 45ms 0.32% 79.64% 141ms 0.99% std::__cxx11::basic_string::basic_string 132ms 0.93% 80.57% 132ms 0.93% [libchaste_ode.so] 129ms 0.91% 81.48% 129ms 0.91% ddot_ 95ms 0.67% 82.14% 121ms 0.85% _int_malloc 51ms 0.36% 82.50% 117ms 0.82% H5S_hyper_add_span_element 83ms 0.58% 83.08% 116ms 0.81% AbstractOneStepIvpOdeSolver::Solve 26ms 0.18% 83.27% 111ms 0.78% AbstractCardiacCell::SetVoltage (partial-inline) 28ms 0.2% 83.46% 110ms 0.77% H5S_set_version 110ms 0.77% 84.24% 110ms 0.77% __ieee754_log_fma 74ms 0.52% 84.75% 109ms 0.77% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 69ms 0.48% 85.24% 101ms 0.71% __libc_calloc 44ms 0.31% 85.55% 91ms 0.64% std::char_traits::length (inline) 36ms 0.25% 85.80% 88ms 0.62% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 1ms 0.007% 85.81% 86ms 0.6% opal_datatype_create_desc 58ms 0.41% 86.21% 85ms 0.6% TimeStepper::AdvanceOneTimeStep 0 0% 86.21% 84ms 0.59% VecNorm 84ms 0.59% 86.80% 84ms 0.59% asuint64 (inline) 83ms 0.58% 87.39% 83ms 0.58% ReplicatableVector::operator[] 27ms 0.19% 87.58% 82ms 0.58% H5VM_array_calc 2ms 0.014% 87.59% 81ms 0.57% VecTDot 27ms 0.19% 87.78% 80ms 0.56% AbstractCardiacCell::GetVoltage (partial-inline) 1ms 0.007% 87.79% 79ms 0.55% PMPI_Type_create_resized 1ms 0.007% 87.79% 79ms 0.55% PMPI_Type_vector 29ms 0.2% 88.00% 78ms 0.55% ompi_datatype_set_args 2ms 0.014% 88.01% 77ms 0.54% VecNorm_Seq 0 0% 88.01% 77ms 0.54% VecTDot_Seq 0 0% 88.01% 77ms 0.54% VecXDot_Seq_Private.constprop.0 1ms 0.007% 88.02% 75ms 0.53% Hdf5DataWriter::PutUnlimitedVariable 62ms 0.44% 88.45% 75ms 0.53% malloc_consolidate 2ms 0.014% 88.47% 73ms 0.51% opal_dss_print_buffer_contents