File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12858ms, 85.95% of 14960ms total Dropped 755 nodes (cum <= 74.80ms) flat flat% sum% cum cum% 0 0% 0% 14950ms 99.93% __libc_start_call_main 0 0% 0% 14950ms 99.93% __libc_start_main_impl 0 0% 0% 14950ms 99.93% _start 0 0% 0% 14946ms 99.91% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14946ms 99.91% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14946ms 99.91% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14946ms 99.91% main 0 0% 0% 14906ms 99.64% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14906ms 99.64% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14906ms 99.64% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 5ms 0.033% 0.033% 14882ms 99.48% AbstractCardiacProblem::Solve 5ms 0.033% 0.067% 11411ms 76.28% AbstractDynamicLinearPdeSolver::Solve 73ms 0.49% 0.55% 9009ms 60.22% AbstractCardiacTissue::SolveCellSystems 96ms 0.64% 1.20% 5473ms 36.58% AbstractCardiacCell::ComputeExceptVoltage 120ms 0.8% 2.00% 4849ms 32.41% AbstractOneStepIvpOdeSolver::InternalSolve 155ms 1.04% 3.03% 4166ms 27.85% EulerIvpOdeSolver::CalculateNextYValue 915ms 6.12% 9.15% 3966ms 26.51% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1851ms 12.37% 21.52% 3558ms 23.78% __GI___exp 0 0% 21.52% 3402ms 22.74% MonodomainProblem::WriteOneStep 1ms 0.0067% 21.53% 3255ms 21.76% Hdf5DataWriter::PutVector 0 0% 21.53% 3246ms 21.70% H5Dwrite 2ms 0.013% 21.54% 3217ms 21.50% H5D__write 133ms 0.89% 22.43% 2839ms 18.98% AbstractCardiacTissue::UpdateCaches (inline) 822ms 5.49% 27.93% 2647ms 17.69% CellLuoRudy1991FromCellML::GetIIonic 1ms 0.0067% 27.93% 1877ms 12.55% H5D__chunk_collective_write 19ms 0.13% 28.06% 1876ms 12.54% H5F_set_coll_metadata_reads 13ms 0.087% 28.15% 1666ms 11.14% H5FD_s3comms_uriencode 1332ms 8.90% 37.05% 1651ms 11.04% __ieee754_exp_fma 4ms 0.027% 37.08% 1631ms 10.90% LinearSystem::Solve 0 0% 37.08% 1493ms 9.98% KSPSolve 4ms 0.027% 37.11% 1493ms 9.98% KSPSolve_Private 0 0% 37.11% 1480ms 9.89% KSPSolve_CG 62ms 0.41% 37.52% 1308ms 8.74% 1ms 0.0067% 37.53% 1305ms 8.72% H5F_block_write 2ms 0.013% 37.54% 1304ms 8.72% H5PB_write 1ms 0.0067% 37.55% 1302ms 8.70% H5F__accum_write 0 0% 37.55% 1301ms 8.70% H5FD_write 6ms 0.04% 37.59% 1212ms 8.10% H5D__chunk_cacheable 2ms 0.013% 37.60% 1205ms 8.05% H5D__mpio_select_write 0 0% 37.60% 1096ms 7.33% PMPI_File_write_at_all 1059ms 7.08% 44.68% 1066ms 7.13% __GI_pwritev64 339ms 2.27% 46.95% 1053ms 7.04% H5S_select_iterate 6ms 0.04% 46.99% 1016ms 6.79% std::pow (inline) 95ms 0.64% 47.62% 1010ms 6.75% __pow 87ms 0.58% 48.20% 915ms 6.12% __ieee754_pow_fma 1ms 0.0067% 48.21% 811ms 5.42% PCApply 1ms 0.0067% 48.22% 806ms 5.39% PCApply_BJacobi_Singleblock 0 0% 48.22% 782ms 5.23% KSPSolve_PREONLY 1ms 0.0067% 48.22% 778ms 5.20% PCApply_ICC 3ms 0.02% 48.24% 777ms 5.19% MatSolve 765ms 5.11% 53.36% 774ms 5.17% MatSolve_SeqSBAIJ_1_NaturalOrdering 331ms 2.21% 55.57% 746ms 4.99% MonodomainSolver::SetupLinearSystem 74ms 0.49% 56.06% 722ms 4.83% H5D__chunk_set_sizes 7ms 0.047% 56.11% 606ms 4.05% MatMult 596ms 3.98% 60.09% 599ms 4.00% MatMult_SeqAIJ 0 0% 60.09% 560ms 3.74% KSP_PCApply.lto_priv.7 85ms 0.57% 60.66% 476ms 3.18% H5S_mpio_space_type 452ms 3.02% 63.68% 452ms 3.02% log_inline (inline) 205ms 1.37% 65.05% 434ms 2.90% CellLuoRudy1991FromCellML::VerifyStateVariables 2ms 0.013% 65.07% 330ms 2.21% KSPConvergedDefault 315ms 2.11% 67.17% 326ms 2.18% exp_inline (inline) 217ms 1.45% 68.62% 269ms 1.80% top12 (inline) 1ms 0.0067% 68.63% 254ms 1.70% KSP_PCApply 93ms 0.62% 69.25% 243ms 1.62% TimeStepper::TimeStepper 13ms 0.087% 69.34% 236ms 1.58% H5VM_chunk_index 222ms 1.48% 70.82% 222ms 1.48% [libchaste_heart.so] 40ms 0.27% 71.09% 210ms 1.40% __GI___libc_free 13ms 0.087% 71.18% 203ms 1.36% MPI_Type_free 46ms 0.31% 71.48% 201ms 1.34% __GI___libc_malloc 12ms 0.08% 71.56% 201ms 1.34% ompi_datatype_destroy 155ms 1.04% 72.60% 186ms 1.24% _int_malloc 178ms 1.19% 73.79% 178ms 1.19% ddot_ 7ms 0.047% 73.84% 178ms 1.19% ompi_datatype_create 36ms 0.24% 74.08% 172ms 1.15% AbstractCardiacCell::SetVoltage (partial-inline) 7ms 0.047% 74.12% 171ms 1.14% ompi_info_register_framework_params 70ms 0.47% 74.59% 168ms 1.12% _int_free 39ms 0.26% 74.85% 167ms 1.12% ompi_datatype_release_args 163ms 1.09% 75.94% 163ms 1.09% asuint64 (inline) 159ms 1.06% 77.01% 159ms 1.06% TimeStepper::CalculateNextTime 119ms 0.8% 77.80% 153ms 1.02% AbstractOneStepIvpOdeSolver::Solve 66ms 0.44% 78.24% 149ms 1% H5S_hyper_add_span_element 1ms 0.0067% 78.25% 147ms 0.98% Hdf5DataWriter::PutUnlimitedVariable 38ms 0.25% 78.50% 146ms 0.98% H5S_set_version 103ms 0.69% 79.19% 129ms 0.86% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 51ms 0.34% 79.53% 123ms 0.82% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 96ms 0.64% 80.17% 119ms 0.8% AbstractParameterisedSystem::SetAnyVariable 1ms 0.0067% 80.18% 119ms 0.8% PMPI_File_set_view 0 0% 80.18% 118ms 0.79% VecDuplicate 8ms 0.053% 80.23% 118ms 0.79% VecDuplicate_MPI 116ms 0.78% 81.01% 116ms 0.78% H5VM_array_offset_pre 1ms 0.0067% 81.02% 115ms 0.77% VecNorm 115ms 0.77% 81.78% 115ms 0.77% __ieee754_log_fma 1ms 0.0067% 81.79% 110ms 0.74% VecNorm_Seq 110ms 0.74% 82.53% 110ms 0.74% __memcpy_avx_unaligned_erms 31ms 0.21% 82.73% 108ms 0.72% H5VM_array_calc 108ms 0.72% 83.46% 108ms 0.72% H5VM_chunk_index_scaled 78ms 0.52% 83.98% 101ms 0.68% AbstractParameterisedSystem::GetAnyVariable 3ms 0.02% 84.00% 101ms 0.68% PMPI_Type_create_resized 0 0% 84.00% 100ms 0.67% VecTDot 1ms 0.0067% 84.00% 99ms 0.66% VecTDot_Seq 0 0% 84.00% 98ms 0.66% VecXDot_Seq_Private.constprop.0 1ms 0.0067% 84.01% 97ms 0.65% ompi_datatype_duplicate 89ms 0.59% 84.61% 89ms 0.59% std::isinf (inline) 47ms 0.31% 84.92% 88ms 0.59% TimeStepper::AdvanceOneTimeStep 2ms 0.013% 84.93% 82ms 0.55% H5D__chunk_allocated 32ms 0.21% 85.15% 80ms 0.53% H5S_select_iter_next 2ms 0.013% 85.16% 78ms 0.52% opal_datatype_create_desc 10ms 0.067% 85.23% 78ms 0.52% opal_dss_print_buffer_contents 28ms 0.19% 85.41% 77ms 0.51% AbstractCardiacCell::GetVoltage (partial-inline) 0 0% 85.41% 76ms 0.51% H5D__select_write 0 0% 85.41% 76ms 0.51% H5Dgather 2ms 0.013% 85.43% 76ms 0.51% PMPI_Type_vector 76ms 0.51% 85.94% 76ms 0.51% std::vector::operator[] (inline) 2ms 0.013% 85.95% 75ms 0.5% H5D__contig_fill