File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 347ms, 90.13% of 385ms total Dropped 149 nodes (cum <= 1.93ms) flat flat% sum% cum cum% 0 0% 0% 378ms 98.18% __libc_start_call_main 0 0% 0% 378ms 98.18% __libc_start_main_impl 0 0% 0% 378ms 98.18% _start 0 0% 0% 375ms 97.40% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 375ms 97.40% CxxTest::TestRunner::runAllTests 0 0% 0% 375ms 97.40% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 375ms 97.40% main 0 0% 0% 339ms 88.05% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 339ms 88.05% CxxTest::TestRunner::runTest (inline) 0 0% 0% 338ms 87.79% CxxTest::RealTestDescription::run 0 0% 0% 338ms 87.79% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 338ms 87.79% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 335ms 87.01% AbstractCardiacProblem::Solve 0 0% 0% 334ms 86.75% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 296ms 76.88% KSPSolve 0 0% 0% 296ms 76.88% KSPSolve_Private 0 0% 0% 296ms 76.88% LinearSystem::Solve 0 0% 0% 295ms 76.62% KSPSolve_CG 0 0% 0% 180ms 46.75% KSP_PCApply.lto_priv.7 1ms 0.26% 0.26% 174ms 45.19% PCApply 0 0% 0.26% 174ms 45.19% PCApply_BJacobi_Singleblock 0 0% 0.26% 151ms 39.22% KSPSolve_PREONLY (partial-inline) 0 0% 0.26% 136ms 35.32% MatSolve 135ms 35.06% 35.32% 136ms 35.32% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 35.32% 136ms 35.32% PCApply_ICC 0 0% 35.32% 59ms 15.32% MatMult 1ms 0.26% 35.58% 59ms 15.32% MatMult_SeqAIJ (partial-inline) 57ms 14.81% 50.39% 59ms 15.32% MatMult_SeqAIJ_Inode (inline) 34ms 8.83% 59.22% 34ms 8.83% ddot_ 0 0% 59.22% 33ms 8.57% CxxTest::RealWorldDescription::setUp 0 0% 59.22% 33ms 8.57% PMPI_Init_thread 0 0% 59.22% 33ms 8.57% PetscInitialize 0 0% 59.22% 33ms 8.57% PetscSetup::setUpWorld 0 0% 59.22% 33ms 8.57% PetscSetupUtils::CommonSetup 0 0% 59.22% 33ms 8.57% PetscSetupUtils::InitialisePetsc 0 0% 59.22% 33ms 8.57% ompi_mpi_init 0 0% 59.22% 30ms 7.79% AbstractCardiacTissue::SolveCellSystems 2ms 0.52% 59.74% 30ms 7.79% MatNullSpaceRemove 2ms 0.52% 60.26% 28ms 7.27% 0 0% 60.26% 21ms 5.45% orte_init 0 0% 60.26% 19ms 4.94% AbstractCardiacCell::ComputeExceptVoltage 0 0% 60.26% 19ms 4.94% VecTDot 0 0% 60.26% 19ms 4.94% VecTDot_Seq 0 0% 60.26% 19ms 4.94% VecXDot_Seq_Private.constprop.0 1ms 0.26% 60.52% 18ms 4.68% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 60.52% 18ms 4.68% VecMDot 1ms 0.26% 60.78% 18ms 4.68% VecMXDot_Private 7ms 1.82% 62.60% 17ms 4.42% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 62.60% 17ms 4.42% EulerIvpOdeSolver::CalculateNextYValue 0 0% 62.60% 17ms 4.42% KSP_PCApply (partial-inline) 17ms 4.42% 67.01% 17ms 4.42% VecMDot_Seq 0 0% 67.01% 17ms 4.42% VecNorm 1ms 0.26% 67.27% 16ms 4.16% VecNorm_Seq 0 0% 67.27% 13ms 3.38% __GI__dl_catch_exception 0 0% 67.27% 13ms 3.38% _dl_catch_error 0 0% 67.27% 13ms 3.38% _dlerror_run 0 0% 67.27% 13ms 3.38% hwloc_topology_load 0 0% 67.27% 13ms 3.38% mca_base_framework_open 0 0% 67.27% 12ms 3.12% VecAYPX 12ms 3.12% 70.39% 12ms 3.12% VecAYPX_Seq 0 0% 70.39% 12ms 3.12% ___dlopen 0 0% 70.39% 12ms 3.12% _dl_open 0 0% 70.39% 12ms 3.12% dl_open_worker 0 0% 70.39% 12ms 3.12% dlopen_doit 0 0% 70.39% 12ms 3.12% dlopen_implementation (inline) 0 0% 70.39% 12ms 3.12% mca_base_framework_components_register 0 0% 70.39% 12ms 3.12% mca_base_framework_register 0 0% 70.39% 12ms 3.12% opal_stackframe_output 0 0% 70.39% 11ms 2.86% AbstractCardiacTissue::UpdateCaches (inline) 5ms 1.30% 71.69% 11ms 2.86% CellLuoRudy1991FromCellML::GetIIonic 0 0% 71.69% 11ms 2.86% _dl_init 0 0% 71.69% 11ms 2.86% call_init (inline) 0 0% 71.69% 11ms 2.86% hwloc_linux_get_tid_last_cpu_location 0 0% 71.69% 11ms 2.86% mca_base_component_find 0 0% 71.69% 11ms 2.86% mca_base_component_repository_open 0 0% 71.69% 10ms 2.60% VecMAXPY 10ms 2.60% 74.29% 10ms 2.60% VecMAXPY_Seq 5ms 1.30% 75.58% 10ms 2.60% __GI___exp 2ms 0.52% 76.10% 8ms 2.08% BidomainSolver::SetupLinearSystem 0 0% 76.10% 8ms 2.08% VecDuplicate 0 0% 76.10% 8ms 2.08% VecDuplicate_Seq 0 0% 76.10% 8ms 2.08% dl_open_worker_begin 0 0% 76.10% 7ms 1.82% _dl_lookup_symbol_x 0 0% 76.10% 7ms 1.82% _dl_start_user 0 0% 76.10% 6ms 1.56% VecCreate_Seq 0 0% 76.10% 6ms 1.56% VecSetType 5ms 1.30% 77.40% 6ms 1.56% do_lookup_x 0 0% 77.40% 6ms 1.56% mca_base_framework_components_open 0 0% 77.40% 5ms 1.30% PetscMallocA 0 0% 77.40% 5ms 1.30% PetscMallocAlign (partial-inline) 0 0% 77.40% 5ms 1.30% VecAXPY 1ms 0.26% 77.66% 5ms 1.30% VecAXPY_Seq 0 0% 77.66% 5ms 1.30% _dl_open_relocate_one_object (inline) 0 0% 77.66% 5ms 1.30% _dl_relocate_object 0 0% 77.66% 5ms 1.30% elf_dynamic_do_Rela (inline) 0 0% 77.66% 5ms 1.30% elf_machine_rela (inline) 0 0% 77.66% 5ms 1.30% mca_topo_base_dist_graph_neighbors_count 0 0% 77.66% 5ms 1.30% opal_hwloc_base_get_topology 0 0% 77.66% 5ms 1.30% orte_ess_base_proc_binding 0 0% 77.66% 5ms 1.30% resolve_map (inline) 0 0% 77.66% 4ms 1.04% KSPConvergedDefault 0 0% 77.66% 4ms 1.04% PetscMemcpy (inline) 0 0% 77.66% 4ms 1.04% VecDestroy 4ms 1.04% 78.70% 4ms 1.04% [libchaste_heart.so] 4ms 1.04% 79.74% 4ms 1.04% __GI___libc_read 1ms 0.26% 80.00% 4ms 1.04% __cxa_finalize 4ms 1.04% 81.04% 4ms 1.04% __ieee754_exp_fma 4ms 1.04% 82.08% 4ms 1.04% __memcpy_evex_unaligned_erms 4ms 1.04% 83.12% 4ms 1.04% __memset_evex_unaligned_erms 0 0% 83.12% 4ms 1.04% _dl_call_fini 2ms 0.52% 83.64% 4ms 1.04% _dl_fixup 0 0% 83.64% 4ms 1.04% _dl_runtime_resolve_xsavec 1ms 0.26% 83.90% 4ms 1.04% boost::serialization::singleton::get_instance 4ms 1.04% 84.94% 4ms 1.04% daxpy_ 0 0% 84.94% 3ms 0.78% AbstractCardiacProblem::Initialise 0 0% 84.94% 3ms 0.78% CxxTest::RealWorldDescription::tearDown 0 0% 84.94% 3ms 0.78% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 84.94% 3ms 0.78% PetscFinalize 1ms 0.26% 85.19% 3ms 0.78% PetscFreeAlign 0 0% 85.19% 3ms 0.78% PetscMemzero (inline) 0 0% 85.19% 3ms 0.78% PetscSetup::tearDownWorld 0 0% 85.19% 3ms 0.78% PetscSetupUtils::CommonFinalize 0 0% 85.19% 3ms 0.78% VecCopy 0 0% 85.19% 3ms 0.78% VecCopy_Seq (partial-inline) 3ms 0.78% 85.97% 3ms 0.78% VecCreate_Seq_Private (partial-inline) 3ms 0.78% 86.75% 3ms 0.78% __GI___clock_nanosleep 0 0% 86.75% 3ms 0.78% __GI___libc_free 1ms 0.26% 87.01% 3ms 0.78% __GI___libc_malloc 0 0% 87.01% 3ms 0.78% __GI___nanosleep 0 0% 87.01% 3ms 0.78% __GI_exit 1ms 0.26% 87.27% 3ms 0.78% __pow 0 0% 87.27% 3ms 0.78% __run_exit_handlers 0 0% 87.27% 3ms 0.78% _dl_fini 0 0% 87.27% 3ms 0.78% _dl_map_object 1ms 0.26% 87.53% 3ms 0.78% _int_free 0 0% 87.53% 3ms 0.78% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 87.53% 3ms 0.78% ompi_mpi_finalize 0 0% 87.53% 3ms 0.78% std::pow (inline) 3ms 0.78% 88.31% 3ms 0.78% strcmp 0 0% 88.31% 3ms 0.78% usleep 0 0% 88.31% 2ms 0.52% AbstractFeVolumeIntegralAssembler::AssembleOnElement 0 0% 88.31% 2ms 0.52% AbstractFeVolumeIntegralAssembler::DoAssemble 0 0% 88.31% 2ms 0.52% TrianglesMeshReader::GetNextElementData 0 0% 88.31% 2ms 0.52% TrianglesMeshReader::GetNextItemFromStream 0 0% 88.31% 2ms 0.52% VecCreate 0 0% 88.31% 2ms 0.52% VecDestroy_Seq 0 0% 88.31% 2ms 0.52% XOpenDisplay 0 0% 88.31% 2ms 0.52% [hwloc_gl.so] 0 0% 88.31% 2ms 0.52% [hwloc_pci.so] 0 0% 88.31% 2ms 0.52% [libpciaccess.so.0.11.1] 0 0% 88.31% 2ms 0.52% [libxcb.so.1.1.0] 0 0% 88.31% 2ms 0.52% _GLOBAL__sub_I_ChasteParameters_3_4.cpp 0 0% 88.31% 2ms 0.52% _IO_fgets 0 0% 88.31% 2ms 0.52% _IO_new_file_underflow 0 0% 88.31% 2ms 0.52% _XConnectXCB 0 0% 88.31% 2ms 0.52% __GI__IO_default_uflow 0 0% 88.31% 2ms 0.52% __GI__IO_getline_info 2ms 0.52% 88.83% 2ms 0.52% __ieee754_log_fma 0 0% 88.83% 2ms 0.52% __ieee754_pow_fma 0 0% 88.83% 2ms 0.52% __posix_memalign 2ms 0.52% 89.35% 2ms 0.52% __strcmp_evex 0 0% 89.35% 2ms 0.52% _dl_name_match_p 1ms 0.26% 89.61% 2ms 0.52% _int_free_maybe_consolidate 0 0% 89.61% 2ms 0.52% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 2ms 0.52% 90.13% 2ms 0.52% boost::serialization::void_cast_detail::void_caster::recursive_unregister 0 0% 90.13% 2ms 0.52% boost::serialization::void_cast_detail::void_caster_primitive::~void_caster_primitive (inline) 0 0% 90.13% 2ms 0.52% mca_base_var_cache_files 0 0% 90.13% 2ms 0.52% pci_get_strings 0 0% 90.13% 2ms 0.52% xcb_connect_to_display_with_auth_info