File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 111792ms, 91.94% of 121593ms total Dropped 1169 nodes (cum <= 607.97ms) flat flat% sum% cum cum% 0 0% 0% 121574ms 100% __libc_start_call_main 0 0% 0% 121574ms 100% __libc_start_main_impl 0 0% 0% 121574ms 100% _start 0 0% 0% 121572ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 121572ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 121572ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 121572ms 100% main 0 0% 0% 121532ms 99.95% AbstractConvergenceTester::Converge 0 0% 0% 121532ms 99.95% CxxTest::RealTestDescription::run 0 0% 0% 121532ms 99.95% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 121532ms 99.95% CxxTest::TestRunner::runTest (inline) 0 0% 0% 121532ms 99.95% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 121532ms 99.95% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 2ms 0.0016% 0.0016% 120263ms 98.91% AbstractCardiacProblem::Solve 3ms 0.0025% 0.0041% 119467ms 98.25% AbstractDynamicLinearPdeSolver::Solve 7ms 0.0058% 0.0099% 67681ms 55.66% LinearSystem::Solve 4ms 0.0033% 0.013% 67156ms 55.23% KSPSolve 14ms 0.012% 0.025% 67152ms 55.23% KSPSolve_Private 13ms 0.011% 0.035% 66679ms 54.84% KSPSolve_SYMMLQ 221ms 0.18% 0.22% 42949ms 35.32% AbstractCardiacTissue::SolveCellSystems 1ms 0.00082% 0.22% 37454ms 30.80% PCApply 4ms 0.0033% 0.22% 37445ms 30.80% PCApply_BJacobi_Singleblock 1ms 0.00082% 0.22% 34553ms 28.42% KSPSolve_PREONLY (partial-inline) 9ms 0.0074% 0.23% 33442ms 27.50% MatSolve 0 0% 0.23% 33442ms 27.50% PCApply_ICC 32870ms 27.03% 27.26% 33433ms 27.50% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1380ms 1.13% 28.40% 32835ms 27.00% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 2ms 0.0016% 28.40% 32382ms 26.63% KSP_PCApply.lto_priv.18 6879ms 5.66% 34.06% 28426ms 23.38% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 10ms 0.0082% 34.06% 22629ms 18.61% MatMult 268ms 0.22% 34.28% 22619ms 18.60% MatMult_SeqAIJ (partial-inline) 22111ms 18.18% 52.47% 22616ms 18.60% MatMult_SeqAIJ_Inode (inline) 1943ms 1.60% 54.07% 14721ms 12.11% CardiacNewtonSolver::Solve 302ms 0.25% 54.32% 9193ms 7.56% AbstractCardiacTissue::UpdateCaches (inline) 4452ms 3.66% 57.98% 8707ms 7.16% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1970ms 1.62% 59.60% 8677ms 7.14% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1070ms 0.88% 60.48% 7856ms 6.46% BidomainSolver::SetupLinearSystem 1199ms 0.99% 61.46% 7509ms 6.18% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 0 0% 61.46% 7155ms 5.88% KSP_PCApply (partial-inline) 9ms 0.0074% 61.47% 6574ms 5.41% KSPConvergedDefault 6049ms 4.97% 66.45% 6049ms 4.97% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3949ms 3.25% 69.69% 4000ms 3.29% __ieee754_log_fma 0 0% 69.69% 3689ms 3.03% boost::numeric::ublas::norm_inf (inline) 2495ms 2.05% 71.75% 3689ms 3.03% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 71.75% 3689ms 3.03% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 71.75% 3689ms 3.03% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 3587ms 2.95% 74.70% 3587ms 2.95% __memcpy_avx_unaligned_erms 12ms 0.0099% 74.70% 3565ms 2.93% MatNullSpaceRemove 0 0% 74.70% 3544ms 2.91% PetscMemcpy (inline) 33ms 0.027% 74.73% 3220ms 2.65% std::pow (inline) 383ms 0.31% 75.05% 3181ms 2.62% __pow 18ms 0.015% 75.06% 3015ms 2.48% VecCopy 1ms 0.00082% 75.06% 2994ms 2.46% VecCopy_Seq (partial-inline) 2855ms 2.35% 77.41% 2855ms 2.35% ddot_ 1745ms 1.44% 78.85% 2830ms 2.33% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 408ms 0.34% 79.18% 2788ms 2.29% __ieee754_pow_fma 16ms 0.013% 79.19% 2708ms 2.23% VecAXPY 3ms 0.0025% 79.20% 2692ms 2.21% VecAXPY_Seq 2665ms 2.19% 81.39% 2665ms 2.19% daxpy_ 6ms 0.0049% 81.39% 2396ms 1.97% VecDot 1ms 0.00082% 81.39% 2390ms 1.97% VecDot_Seq 2ms 0.0016% 81.40% 2389ms 1.96% VecXDot_Seq_Private.constprop.0 2ms 0.0016% 81.40% 2067ms 1.70% AbstractFeVolumeIntegralAssembler::DoAssemble 3ms 0.0025% 81.40% 2053ms 1.69% VecMDot 15ms 0.012% 81.41% 2050ms 1.69% VecMXDot_Private 2027ms 1.67% 83.08% 2030ms 1.67% VecMDot_Seq 23ms 0.019% 83.10% 1701ms 1.40% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1602ms 1.32% 84.42% 1661ms 1.37% exp_inline (inline) 7ms 0.0058% 84.42% 1500ms 1.23% VecMAXPY 1484ms 1.22% 85.64% 1493ms 1.23% VecMAXPY_Seq 1438ms 1.18% 86.82% 1438ms 1.18% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 0 0% 86.82% 1416ms 1.16% AbstractFeAssemblerInterface::AssembleMatrix (inline) 1333ms 1.10% 87.92% 1333ms 1.10% __memset_avx2_unaligned_erms 0 0% 87.92% 1325ms 1.09% PetscMemzero (inline) 2ms 0.0016% 87.92% 1168ms 0.96% KSP_RemoveNullSpace (inline) 0 0% 87.92% 1108ms 0.91% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 87.92% 1108ms 0.91% CuboidMeshConstructor::Construct 0 0% 87.92% 1108ms 0.91% DistributedTetrahedralMesh::ConstructCuboid 9ms 0.0074% 87.93% 1101ms 0.91% boost::numeric::ublas::matrix_assign (inline) 0 0% 87.93% 1101ms 0.91% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 87.93% 1101ms 0.91% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 87.93% 1101ms 0.91% boost_numeric_ublas_abs (inline) 1101ms 0.91% 88.84% 1101ms 0.91% std::abs (inline) 203ms 0.17% 89.00% 1089ms 0.9% boost::numeric::ublas::indexing_matrix_assign 811ms 0.67% 89.67% 1078ms 0.89% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 2ms 0.0016% 89.67% 1058ms 0.87% VecDuplicate 2ms 0.0016% 89.67% 1007ms 0.83% Element::Element 7ms 0.0058% 89.68% 984ms 0.81% AbstractTetrahedralElement::CalculateJacobian 6ms 0.0049% 89.68% 962ms 0.79% VecScale 6ms 0.0049% 89.69% 956ms 0.79% VecScale_Seq 948ms 0.78% 90.47% 948ms 0.78% dscal_ 4ms 0.0033% 90.47% 937ms 0.77% AbstractTetrahedralElement::AbstractTetrahedralElement 14ms 0.012% 90.48% 878ms 0.72% PetscMallocA 5ms 0.0041% 90.49% 873ms 0.72% BidomainAssembler::ComputeMatrixTerm 10ms 0.0082% 90.50% 864ms 0.71% PetscMallocAlign (partial-inline) 856ms 0.7% 91.20% 856ms 0.7% [libchaste_heart.so] 10ms 0.0082% 91.21% 855ms 0.7% boost::numeric::ublas::c_matrix::c_matrix (inline) 0 0% 91.21% 733ms 0.6% BidomainProblem::WriteOneStep 9ms 0.0074% 91.21% 722ms 0.59% VecNorm 1ms 0.00082% 91.22% 708ms 0.58% VecNorm_Seq 674ms 0.55% 91.77% 674ms 0.55% log_inline (inline) 1ms 0.00082% 91.77% 660ms 0.54% AbstractBidomainSolver::FinaliseLinearSystem 201ms 0.17% 91.94% 658ms 0.54% AbstractBidomainSolver::CheckCompatibilityCondition 4ms 0.0033% 91.94% 652ms 0.54% VecDuplicate_Seq 0 0% 91.94% 651ms 0.54% AbstractFeAssemblerInterface::Assemble (inline)