File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 13031ms, 86.71% of 15028ms total Dropped 746 nodes (cum <= 75.14ms) flat flat% sum% cum cum% 0 0% 0% 15020ms 99.95% __libc_start_call_main 0 0% 0% 15020ms 99.95% __libc_start_main_impl 0 0% 0% 15020ms 99.95% _start 0 0% 0% 15018ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 15018ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 15018ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 15018ms 99.93% main 0 0% 0% 14976ms 99.65% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14976ms 99.65% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14976ms 99.65% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 2ms 0.013% 0.013% 14953ms 99.50% AbstractCardiacProblem::Solve 1ms 0.0067% 0.02% 11315ms 75.29% AbstractDynamicLinearPdeSolver::Solve 44ms 0.29% 0.31% 9187ms 61.13% AbstractCardiacTissue::SolveCellSystems 147ms 0.98% 1.29% 5696ms 37.90% AbstractCardiacCell::ComputeExceptVoltage 182ms 1.21% 2.50% 4934ms 32.83% AbstractOneStepIvpOdeSolver::InternalSolve 178ms 1.18% 3.69% 4219ms 28.07% EulerIvpOdeSolver::CalculateNextYValue 908ms 6.04% 9.73% 3989ms 26.54% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1711ms 11.39% 21.11% 3642ms 24.23% __GI___exp 0 0% 21.11% 3564ms 23.72% MonodomainProblem::WriteOneStep 1ms 0.0067% 21.12% 3412ms 22.70% Hdf5DataWriter::PutVector 1ms 0.0067% 21.13% 3352ms 22.31% H5Dwrite 7ms 0.047% 21.17% 3319ms 22.09% H5D__write 101ms 0.67% 21.85% 2655ms 17.67% AbstractCardiacTissue::UpdateCaches (inline) 801ms 5.33% 27.18% 2517ms 16.75% CellLuoRudy1991FromCellML::GetIIonic 1690ms 11.25% 38.42% 1850ms 12.31% __ieee754_exp_fma 0 0% 38.42% 1847ms 12.29% H5D__chunk_collective_write 17ms 0.11% 38.53% 1847ms 12.29% H5F_set_coll_metadata_reads 15ms 0.1% 38.63% 1559ms 10.37% H5FD_s3comms_uriencode 7ms 0.047% 38.68% 1364ms 9.08% H5D__chunk_cacheable 2ms 0.013% 38.69% 1333ms 8.87% LinearSystem::Solve 1ms 0.0067% 38.70% 1208ms 8.04% KSPSolve 1ms 0.0067% 38.71% 1207ms 8.03% KSPSolve_Private 546ms 3.63% 42.34% 1198ms 7.97% H5S_select_iterate 5ms 0.033% 42.37% 1194ms 7.95% KSPSolve_CG 50ms 0.33% 42.71% 1153ms 7.67% 2ms 0.013% 42.72% 1143ms 7.61% H5F_block_write 3ms 0.02% 42.74% 1141ms 7.59% H5F__accum_write 0 0% 42.74% 1141ms 7.59% H5PB_write 1ms 0.0067% 42.75% 1138ms 7.57% H5FD_write 1ms 0.0067% 42.75% 1066ms 7.09% H5D__mpio_select_write 0 0% 42.75% 959ms 6.38% PMPI_File_write_at_all 937ms 6.24% 48.99% 941ms 6.26% __GI_pwritev64 5ms 0.033% 49.02% 929ms 6.18% std::pow (inline) 100ms 0.67% 49.69% 923ms 6.14% __pow 108ms 0.72% 50.41% 823ms 5.48% __ieee754_pow_fma 353ms 2.35% 52.75% 771ms 5.13% MonodomainSolver::SetupLinearSystem 68ms 0.45% 53.21% 655ms 4.36% H5D__chunk_set_sizes 1ms 0.0067% 53.21% 644ms 4.29% PCApply 301ms 2.00% 55.22% 640ms 4.26% CellLuoRudy1991FromCellML::VerifyStateVariables 1ms 0.0067% 55.22% 640ms 4.26% PCApply_BJacobi_Singleblock 0 0% 55.22% 615ms 4.09% KSPSolve_PREONLY 1ms 0.0067% 55.23% 613ms 4.08% PCApply_ICC 2ms 0.013% 55.24% 612ms 4.07% MatSolve 600ms 3.99% 59.24% 610ms 4.06% MatSolve_SeqSBAIJ_1_NaturalOrdering 3ms 0.02% 59.26% 545ms 3.63% MatMult 539ms 3.59% 62.84% 542ms 3.61% MatMult_SeqAIJ 64ms 0.43% 63.27% 532ms 3.54% H5S_mpio_space_type 3ms 0.02% 63.29% 435ms 2.89% KSP_PCApply.lto_priv.7 393ms 2.62% 65.90% 393ms 2.62% log_inline (inline) 288ms 1.92% 67.82% 290ms 1.93% exp_inline (inline) 2ms 0.013% 67.83% 273ms 1.82% KSPConvergedDefault 128ms 0.85% 68.69% 244ms 1.62% TimeStepper::TimeStepper 44ms 0.29% 68.98% 228ms 1.52% __GI___libc_malloc 19ms 0.13% 69.10% 218ms 1.45% H5VM_chunk_index 0 0% 69.10% 212ms 1.41% KSP_PCApply 159ms 1.06% 70.16% 211ms 1.40% _int_malloc 9ms 0.06% 70.22% 207ms 1.38% MPI_Type_free 9ms 0.06% 70.28% 204ms 1.36% ompi_datatype_destroy 184ms 1.22% 71.51% 184ms 1.22% [libchaste_heart.so] 50ms 0.33% 71.84% 183ms 1.22% ompi_datatype_release_args 12ms 0.08% 71.92% 183ms 1.22% ompi_info_register_framework_params 37ms 0.25% 72.17% 182ms 1.21% __GI___libc_free 7ms 0.047% 72.21% 178ms 1.18% ompi_datatype_create 103ms 0.69% 72.90% 175ms 1.16% top12 (inline) 156ms 1.04% 73.94% 174ms 1.16% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 33ms 0.22% 74.15% 161ms 1.07% AbstractCardiacCell::SetVoltage (partial-inline) 157ms 1.04% 75.20% 157ms 1.04% std::isinf (inline) 1ms 0.0067% 75.21% 152ms 1.01% Hdf5DataWriter::PutUnlimitedVariable 74ms 0.49% 75.70% 150ms 1% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 112ms 0.75% 76.44% 145ms 0.96% AbstractOneStepIvpOdeSolver::Solve 63ms 0.42% 76.86% 144ms 0.96% _int_free 66ms 0.44% 77.30% 128ms 0.85% H5S_hyper_add_span_element 19ms 0.13% 77.43% 124ms 0.83% H5S_set_version 124ms 0.83% 78.25% 124ms 0.83% ddot_ 123ms 0.82% 79.07% 123ms 0.82% TimeStepper::CalculateNextTime 2ms 0.013% 79.09% 120ms 0.8% PMPI_Type_create_resized 1ms 0.0067% 79.09% 118ms 0.79% PMPI_File_set_view 114ms 0.76% 79.85% 114ms 0.76% H5VM_chunk_index_scaled 108ms 0.72% 80.57% 108ms 0.72% __ieee754_log_fma 47ms 0.31% 80.88% 105ms 0.7% H5VM_array_calc 102ms 0.68% 81.56% 102ms 0.68% __memcpy_avx_unaligned_erms 41ms 0.27% 81.83% 102ms 0.68% std::__cxx11::basic_string::basic_string 6ms 0.04% 81.87% 101ms 0.67% ompi_datatype_duplicate 87ms 0.58% 82.45% 96ms 0.64% AbstractParameterisedSystem::SetAnyVariable 3ms 0.02% 82.47% 95ms 0.63% H5Pcreate 52ms 0.35% 82.82% 94ms 0.63% H5SL_search 1ms 0.0067% 82.83% 93ms 0.62% VecDuplicate 1ms 0.0067% 82.83% 92ms 0.61% VecDuplicate_MPI 91ms 0.61% 83.44% 91ms 0.61% asuint64 (inline) 77ms 0.51% 83.95% 90ms 0.6% AbstractParameterisedSystem::GetAnyVariable 12ms 0.08% 84.03% 89ms 0.59% H5P_create_id 4ms 0.027% 84.06% 89ms 0.59% MPI_Type_create_hindexed 1ms 0.0067% 84.06% 87ms 0.58% VecNorm 86ms 0.57% 84.64% 86ms 0.57% H5VM_array_offset_pre 30ms 0.2% 84.83% 86ms 0.57% ompi_datatype_set_args 41ms 0.27% 85.11% 85ms 0.57% AbstractCardiacCell::GetVoltage (partial-inline) 51ms 0.34% 85.45% 85ms 0.57% TimeStepper::AdvanceOneTimeStep 1ms 0.0067% 85.45% 82ms 0.55% VecNorm_Seq 26ms 0.17% 85.63% 82ms 0.55% __libc_calloc 81ms 0.54% 86.17% 81ms 0.54% [libm.so.6] 79ms 0.53% 86.69% 79ms 0.53% std::vector::operator[] (inline) 3ms 0.02% 86.71% 77ms 0.51% PMPI_Type_vector