File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 318ms, 92.17% of 345ms total Dropped 126 nodes (cum <= 1.73ms) flat flat% sum% cum cum% 0 0% 0% 339ms 98.26% __libc_start_call_main 0 0% 0% 339ms 98.26% __libc_start_main_impl 0 0% 0% 339ms 98.26% _start 0 0% 0% 337ms 97.68% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 337ms 97.68% CxxTest::TestRunner::runAllTests 0 0% 0% 337ms 97.68% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 337ms 97.68% main 0 0% 0% 306ms 88.70% CxxTest::RealTestDescription::run 0 0% 0% 306ms 88.70% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 306ms 88.70% CxxTest::TestRunner::runTest (inline) 1ms 0.29% 0.29% 306ms 88.70% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0.29% 306ms 88.70% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0.29% 302ms 87.54% AbstractCardiacProblem::Solve 0 0% 0.29% 301ms 87.25% AbstractDynamicLinearPdeSolver::Solve 0 0% 0.29% 267ms 77.39% LinearSystem::Solve 0 0% 0.29% 266ms 77.10% KSPSolve 0 0% 0.29% 266ms 77.10% KSPSolve_CG 1ms 0.29% 0.58% 266ms 77.10% KSPSolve_Private 0 0% 0.58% 168ms 48.70% KSP_PCApply.lto_priv.7 1ms 0.29% 0.87% 164ms 47.54% PCApply 0 0% 0.87% 164ms 47.54% PCApply_BJacobi_Singleblock 0 0% 0.87% 148ms 42.90% KSPSolve_PREONLY (partial-inline) 0 0% 0.87% 136ms 39.42% MatSolve 136ms 39.42% 40.29% 136ms 39.42% MatSolve_SeqSBAIJ_1_NaturalOrdering 0 0% 40.29% 136ms 39.42% PCApply_ICC 0 0% 40.29% 51ms 14.78% MatMult 2ms 0.58% 40.87% 51ms 14.78% MatMult_SeqAIJ (partial-inline) 49ms 14.20% 55.07% 51ms 14.78% MatMult_SeqAIJ_Inode (inline) 34ms 9.86% 64.93% 34ms 9.86% ddot_ 0 0% 64.93% 29ms 8.41% AbstractCardiacTissue::SolveCellSystems 0 0% 64.93% 29ms 8.41% CxxTest::RealWorldDescription::setUp 0 0% 64.93% 29ms 8.41% PetscInitialize 0 0% 64.93% 29ms 8.41% PetscSetup::setUpWorld 0 0% 64.93% 29ms 8.41% PetscSetupUtils::CommonSetup 0 0% 64.93% 29ms 8.41% PetscSetupUtils::InitialisePetsc 0 0% 64.93% 28ms 8.12% PMPI_Init_thread 0 0% 64.93% 28ms 8.12% ompi_mpi_init 0 0% 64.93% 25ms 7.25% 0 0% 64.93% 25ms 7.25% MatNullSpaceRemove 0 0% 64.93% 24ms 6.96% VecTDot 0 0% 64.93% 24ms 6.96% VecTDot_Seq 0 0% 64.93% 24ms 6.96% VecXDot_Seq_Private.constprop.0 0 0% 64.93% 20ms 5.80% orte_init 0 0% 64.93% 15ms 4.35% AbstractCardiacCell::ComputeExceptVoltage 0 0% 64.93% 14ms 4.06% hwloc_topology_load 1ms 0.29% 65.22% 13ms 3.77% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 65.22% 13ms 3.77% KSP_PCApply (partial-inline) 0 0% 65.22% 13ms 3.77% VecMDot 1ms 0.29% 65.51% 13ms 3.77% VecMXDot_Private 0 0% 65.51% 13ms 3.77% hwloc_linux_get_tid_last_cpu_location 0 0% 65.51% 12ms 3.48% AbstractCardiacTissue::UpdateCaches (inline) 0 0% 65.51% 12ms 3.48% VecMAXPY 12ms 3.48% 68.99% 12ms 3.48% VecMAXPY_Seq 12ms 3.48% 72.46% 12ms 3.48% VecMDot_Seq 4ms 1.16% 73.62% 11ms 3.19% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 73.62% 11ms 3.19% EulerIvpOdeSolver::CalculateNextYValue 3ms 0.87% 74.49% 10ms 2.90% CellLuoRudy1991FromCellML::GetIIonic 0 0% 74.49% 10ms 2.90% VecNorm 0 0% 74.49% 10ms 2.90% VecNorm_Seq 0 0% 74.49% 10ms 2.90% __GI__dl_catch_exception 0 0% 74.49% 10ms 2.90% _dl_catch_error 0 0% 74.49% 10ms 2.90% _dlerror_run 0 0% 74.49% 10ms 2.90% mca_base_framework_open 9ms 2.61% 77.10% 9ms 2.61% __GI___libc_read 0 0% 77.10% 9ms 2.61% mca_base_framework_components_register 0 0% 77.10% 9ms 2.61% mca_base_framework_register 0 0% 77.10% 9ms 2.61% opal_stackframe_output 2ms 0.58% 77.68% 8ms 2.32% __GI___exp 0 0% 77.68% 8ms 2.32% _dl_init 0 0% 77.68% 8ms 2.32% call_init (inline) 0 0% 77.68% 7ms 2.03% ___dlopen 0 0% 77.68% 7ms 2.03% _dl_open 0 0% 77.68% 7ms 2.03% dlopen_doit 0 0% 77.68% 7ms 2.03% dlopen_implementation (inline) 0 0% 77.68% 6ms 1.74% VecAYPX 6ms 1.74% 79.42% 6ms 1.74% VecAYPX_Seq 6ms 1.74% 81.16% 6ms 1.74% __ieee754_exp_fma 0 0% 81.16% 6ms 1.74% _dl_start_user 0 0% 81.16% 6ms 1.74% dl_open_worker 0 0% 81.16% 6ms 1.74% mca_base_component_find 0 0% 81.16% 6ms 1.74% mca_base_component_repository_open 0 0% 81.16% 6ms 1.74% opal_hwloc_base_get_topology 0 0% 81.16% 6ms 1.74% orte_ess_base_proc_binding 0 0% 81.16% 5ms 1.45% VecAXPY 0 0% 81.16% 5ms 1.45% VecAXPY_Seq 0 0% 81.16% 5ms 1.45% __ieee754_pow_fma 0 0% 81.16% 5ms 1.45% __pow 1ms 0.29% 81.45% 5ms 1.45% boost::serialization::singleton::get_instance 5ms 1.45% 82.90% 5ms 1.45% daxpy_ 0 0% 82.90% 5ms 1.45% std::pow (inline) 1ms 0.29% 83.19% 4ms 1.16% BidomainSolver::SetupLinearSystem 4ms 1.16% 84.35% 4ms 1.16% __GI_munmap 0 0% 84.35% 4ms 1.16% _dl_lookup_symbol_x 0 0% 84.35% 4ms 1.16% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 84.35% 4ms 1.16% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 84.35% 4ms 1.16% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 84.35% 4ms 1.16% dl_open_worker_begin 4ms 1.16% 85.51% 4ms 1.16% do_lookup_x 3ms 0.87% 86.38% 4ms 1.16% exp_inline (inline) 0 0% 86.38% 3ms 0.87% AbstractCardiacProblem::Initialise 0 0% 86.38% 3ms 0.87% DistributedTetrahedralMesh::ConstructFromMeshReader 2ms 0.58% 86.96% 3ms 0.87% PetscMallocA 3ms 0.87% 87.83% 3ms 0.87% [libchaste_heart.so] 2ms 0.58% 88.41% 3ms 0.87% __GI___libc_malloc 0 0% 88.41% 3ms 0.87% __dlclose 0 0% 88.41% 3ms 0.87% _dl_close 0 0% 88.41% 3ms 0.87% _dl_close_worker (inline) 1ms 0.29% 88.70% 3ms 0.87% _dl_fixup 0 0% 88.70% 3ms 0.87% _dl_runtime_resolve_xsavec 0 0% 88.70% 3ms 0.87% _dl_unmap 0 0% 88.70% 3ms 0.87% _dl_unmap_segments (inline) 2ms 0.58% 89.28% 3ms 0.87% boost::serialization::typeid_system::extended_type_info_typeid_0::is_equal 0 0% 89.28% 3ms 0.87% mca_base_component_var_register 0 0% 89.28% 3ms 0.87% mca_base_framework_components_open 0 0% 89.28% 3ms 0.87% mca_base_var_group_register 0 0% 89.28% 3ms 0.87% mca_base_var_register 0 0% 89.28% 3ms 0.87% mca_topo_base_dist_graph_neighbors_count 0 0% 89.28% 2ms 0.58% AbstractFeVolumeIntegralAssembler::DoAssemble 1ms 0.29% 89.57% 2ms 0.58% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 89.57% 2ms 0.58% CxxTest::RealWorldDescription::tearDown 0 0% 89.57% 2ms 0.58% KSPConvergedDefault 0 0% 89.57% 2ms 0.58% PetscFinalize 0 0% 89.57% 2ms 0.58% PetscMemcpy (inline) 0 0% 89.57% 2ms 0.58% PetscSetup::tearDownWorld 0 0% 89.57% 2ms 0.58% PetscSetupUtils::CommonFinalize 1ms 0.29% 89.86% 2ms 0.58% TrianglesMeshReader::GetNextItemFromStream 0 0% 89.86% 2ms 0.58% VecCopy 0 0% 89.86% 2ms 0.58% VecCopy_Seq (partial-inline) 1ms 0.29% 90.14% 2ms 0.58% VecDestroy 0 0% 90.14% 2ms 0.58% VecDuplicate 0 0% 90.14% 2ms 0.58% VecDuplicate_Seq 0 0% 90.14% 2ms 0.58% VecSetType 0 0% 90.14% 2ms 0.58% XOpenDisplay 0 0% 90.14% 2ms 0.58% [hwloc_gl.so] 0 0% 90.14% 2ms 0.58% [libxcb.so.1.1.0] 0 0% 90.14% 2ms 0.58% _GLOBAL__sub_I_ChasteParameters_3_4.cpp 0 0% 90.14% 2ms 0.58% _XConnectXCB 0 0% 90.14% 2ms 0.58% __GI_exit 2ms 0.58% 90.72% 2ms 0.58% __GI_getenv 0 0% 90.72% 2ms 0.58% __cxa_finalize 2ms 0.58% 91.30% 2ms 0.58% __memcpy_avx512_unaligned_erms 0 0% 91.30% 2ms 0.58% __run_exit_handlers 2ms 0.58% 91.88% 2ms 0.58% __strncat_chk 0 0% 91.88% 2ms 0.58% _dl_call_fini 0 0% 91.88% 2ms 0.58% _dl_fini 0 0% 91.88% 2ms 0.58% _dl_map_object 0 0% 91.88% 2ms 0.58% _dl_open_relocate_one_object (inline) 0 0% 91.88% 2ms 0.58% _dl_relocate_object 1ms 0.29% 92.17% 2ms 0.58% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 92.17% 2ms 0.58% elf_dynamic_do_Rela (inline) 0 0% 92.17% 2ms 0.58% elf_machine_rela (inline) 0 0% 92.17% 2ms 0.58% mca_base_component_repository_release 0 0% 92.17% 2ms 0.58% mca_base_components_close 0 0% 92.17% 2ms 0.58% mca_base_framework_close 0 0% 92.17% 2ms 0.58% ompi_mpi_finalize 0 0% 92.17% 2ms 0.58% resolve_map (inline) 0 0% 92.17% 2ms 0.58% xcb_connect_to_display_with_auth_info