File: Test3dBidomainProblemWithMetisForEfficiency Type: cpu Showing nodes accounting for 3523ms, 89.30% of 3945ms total Dropped 412 nodes (cum <= 19.73ms) flat flat% sum% cum cum% 0 0% 0% 3938ms 99.82% __libc_start_call_main 0 0% 0% 3938ms 99.82% __libc_start_main_impl 0 0% 0% 3938ms 99.82% _start 0 0% 0% 3936ms 99.77% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 3936ms 99.77% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 3936ms 99.77% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 3936ms 99.77% main 0 0% 0% 3905ms 98.99% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 3905ms 98.99% CxxTest::TestRunner::runTest (inline) 0 0% 0% 3905ms 98.99% Test3dBidomainProblemWithMetisForEfficiency::TestBidomain3d 0 0% 0% 3898ms 98.81% AbstractCardiacProblem::Solve 1ms 0.025% 0.025% 3898ms 98.81% AbstractDynamicLinearPdeSolver::Solve 23ms 0.58% 0.61% 1946ms 49.33% AbstractCardiacTissue::SolveCellSystems 0 0% 0.61% 1536ms 38.94% LinearSystem::Solve 0 0% 0.61% 1499ms 38.00% KSPSolve 2ms 0.051% 0.66% 1499ms 38.00% KSPSolve_Private 2ms 0.051% 0.71% 1464ms 37.11% KSPSolve_SYMMLQ 11ms 0.28% 0.99% 1142ms 28.95% AbstractCardiacCell::ComputeExceptVoltage 25ms 0.63% 1.62% 1018ms 25.80% AbstractOneStepIvpOdeSolver::InternalSolve 93ms 2.36% 3.98% 848ms 21.50% EulerIvpOdeSolver::CalculateNextYValue 2ms 0.051% 4.03% 807ms 20.46% PCApply 1ms 0.025% 4.06% 798ms 20.23% PCApply_BJacobi_Singleblock 253ms 6.41% 10.47% 742ms 18.81% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1ms 0.025% 10.49% 738ms 18.71% MatMult 4ms 0.1% 10.60% 736ms 18.66% MatMult_SeqAIJ 729ms 18.48% 29.07% 734ms 18.61% MatMult_SeqAIJ_Inode (inline) 1ms 0.025% 29.10% 689ms 17.47% KSPSolve_PREONLY (partial-inline) 0 0% 29.10% 645ms 16.35% MatSolve 0 0% 29.10% 645ms 16.35% PCApply_ICC 638ms 16.17% 45.27% 640ms 16.22% MatSolve_SeqSBAIJ_1_NaturalOrdering 18ms 0.46% 45.73% 631ms 15.99% AbstractCardiacTissue::UpdateCaches (inline) 259ms 6.57% 52.29% 588ms 14.90% CellLuoRudy1991FromCellML::GetIIonic 0 0% 52.29% 588ms 14.90% KSP_PCApply.lto_priv.18 193ms 4.89% 57.19% 554ms 14.04% __GI___exp 43ms 1.09% 58.28% 380ms 9.63% BidomainSolver::SetupLinearSystem 315ms 7.98% 66.26% 317ms 8.04% __ieee754_exp_fma 1ms 0.025% 66.29% 286ms 7.25% KSPConvergedDefault 0 0% 66.29% 283ms 7.17% KSP_PCApply (partial-inline) 4ms 0.1% 66.39% 186ms 4.71% std::pow (inline) 13ms 0.33% 66.72% 180ms 4.56% __pow 12ms 0.3% 67.02% 166ms 4.21% __ieee754_pow_fma 124ms 3.14% 70.16% 124ms 3.14% [libchaste_heart.so] 71ms 1.80% 71.96% 117ms 2.97% CellLuoRudy1991FromCellML::VerifyStateVariables 1ms 0.025% 71.99% 106ms 2.69% MatNullSpaceRemove 75ms 1.90% 73.89% 86ms 2.18% exp_inline (inline) 2ms 0.051% 73.94% 76ms 1.93% VecDuplicate 30ms 0.76% 74.70% 75ms 1.90% TimeStepper::TimeStepper 19ms 0.48% 75.18% 69ms 1.75% MPI_Wtime 67ms 1.70% 76.88% 67ms 1.70% log_inline (inline) 61ms 1.55% 78.43% 61ms 1.55% TimeStepper::CalculateNextTime 0 0% 78.43% 54ms 1.37% VecMDot 2ms 0.051% 78.48% 54ms 1.37% VecMXDot_Private 4ms 0.1% 78.58% 51ms 1.29% VecMAXPY 50ms 1.27% 79.85% 50ms 1.27% [[vdso]] 0 0% 79.85% 50ms 1.27% __GI___clock_gettime 46ms 1.17% 81.01% 46ms 1.17% [libm.so.6] 11ms 0.28% 81.29% 45ms 1.14% PetscLogEventBeginDefault 9ms 0.23% 81.52% 45ms 1.14% PetscLogEventEndDefault 3ms 0.076% 81.60% 44ms 1.12% VecDuplicate_MPI 40ms 1.01% 82.61% 41ms 1.04% VecMDot_Seq 38ms 0.96% 83.57% 38ms 0.96% ddot_ 2ms 0.051% 83.62% 37ms 0.94% VecNorm 3ms 0.076% 83.70% 36ms 0.91% VecCopy 35ms 0.89% 84.59% 35ms 0.89% [libchaste_ode.so] 0 0% 84.59% 32ms 0.81% VecCreate 24ms 0.61% 85.20% 31ms 0.79% AbstractOneStepIvpOdeSolver::Solve 5ms 0.13% 85.32% 30ms 0.76% AbstractBidomainSolver::CheckCompatibilityCondition 0 0% 85.32% 30ms 0.76% AbstractBidomainSolver::FinaliseLinearSystem 15ms 0.38% 85.70% 30ms 0.76% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 6ms 0.15% 85.86% 30ms 0.76% TimeStepper::AdvanceOneTimeStep 0 0% 85.86% 30ms 0.76% VecDuplicate_Seq 29ms 0.74% 86.59% 30ms 0.76% VecMAXPY_Seq 6ms 0.15% 86.74% 29ms 0.74% AbstractCardiacCell::SetVoltage (partial-inline) 0 0% 86.74% 29ms 0.74% VecDestroy 4ms 0.1% 86.84% 28ms 0.71% PMPI_Comm_get_attr 1ms 0.025% 86.87% 28ms 0.71% PetscMallocA 0 0% 86.87% 27ms 0.68% CxxTest::RealWorldDescription::setUp 0 0% 86.87% 27ms 0.68% PMPI_Init_thread 0 0% 86.87% 27ms 0.68% PetscInitialize 0 0% 86.87% 27ms 0.68% PetscMallocAlign 0 0% 86.87% 27ms 0.68% PetscSetup::setUpWorld 0 0% 86.87% 27ms 0.68% PetscSetupUtils::CommonSetup 0 0% 86.87% 27ms 0.68% PetscSetupUtils::InitialisePetsc 0 0% 86.87% 27ms 0.68% ompi_mpi_init 1ms 0.025% 86.89% 26ms 0.66% VecDot 0 0% 86.89% 26ms 0.66% VecNorm_Seq 7ms 0.18% 87.07% 26ms 0.66% __GI___libc_malloc 25ms 0.63% 87.71% 25ms 0.63% __memcpy_avx512_unaligned_erms 5ms 0.13% 87.83% 24ms 0.61% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 4ms 0.1% 87.93% 24ms 0.61% __posix_memalign 2ms 0.051% 87.98% 24ms 0.61% ompi_attr_get_c 2ms 0.051% 88.04% 23ms 0.58% VecAXPY 7ms 0.18% 88.21% 23ms 0.58% std::__cxx11::basic_string::basic_string 0 0% 88.21% 22ms 0.56% 22ms 0.56% 88.77% 22ms 0.56% __ieee754_log_fma 0 0% 88.77% 21ms 0.53% PetscMemcpy (inline) 2ms 0.051% 88.82% 21ms 0.53% VecCreate_MPI_Private 0 0% 88.82% 21ms 0.53% VecDot_Seq 1ms 0.025% 88.85% 21ms 0.53% VecXDot_Seq_Private.constprop.0 18ms 0.46% 89.30% 20ms 0.51% AbstractParameterisedSystem::GetAnyVariable 0 0% 89.30% 20ms 0.51% PetscHeaderCreate_Private