File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 11014ms, 88.60% of 12431ms total Dropped 698 nodes (cum <= 62.16ms) flat flat% sum% cum cum% 0 0% 0% 12423ms 99.94% __libc_start_call_main 0 0% 0% 12423ms 99.94% __libc_start_main_impl 0 0% 0% 12423ms 99.94% _start 0 0% 0% 12421ms 99.92% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 12421ms 99.92% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 12421ms 99.92% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 12421ms 99.92% main 0 0% 0% 12387ms 99.65% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 12387ms 99.65% CxxTest::TestRunner::runTest (inline) 0 0% 0% 12387ms 99.65% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 1ms 0.008% 0.008% 12368ms 99.49% AbstractCardiacProblem::Solve 1ms 0.008% 0.016% 9390ms 75.54% AbstractDynamicLinearPdeSolver::Solve 72ms 0.58% 0.6% 7456ms 59.98% AbstractCardiacTissue::SolveCellSystems 61ms 0.49% 1.09% 4627ms 37.22% AbstractCardiacCell::ComputeExceptVoltage 97ms 0.78% 1.87% 4158ms 33.45% AbstractOneStepIvpOdeSolver::InternalSolve 129ms 1.04% 2.90% 3556ms 28.61% EulerIvpOdeSolver::CalculateNextYValue 899ms 7.23% 10.14% 3403ms 27.38% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 10.14% 2920ms 23.49% MonodomainProblem::WriteOneStep 0 0% 10.14% 2844ms 22.88% Hdf5DataWriter::PutVector 0 0% 10.14% 2822ms 22.70% H5Dwrite 0 0% 10.14% 2801ms 22.53% H5D__write 1034ms 8.32% 18.45% 2668ms 21.46% __GI___exp 79ms 0.64% 19.09% 2015ms 16.21% AbstractCardiacTissue::UpdateCaches (inline) 501ms 4.03% 23.12% 1884ms 15.16% CellLuoRudy1991FromCellML::GetIIonic 0 0% 23.12% 1706ms 13.72% H5D__chunk_collective_write 7ms 0.056% 23.18% 1706ms 13.72% H5F_set_coll_metadata_reads 8ms 0.064% 23.24% 1527ms 12.28% H5FD_s3comms_uriencode 1412ms 11.36% 34.60% 1434ms 11.54% __ieee754_exp_fma 13ms 0.1% 34.70% 1254ms 10.09% 0 0% 34.70% 1248ms 10.04% LinearSystem::Solve 1ms 0.008% 34.71% 1235ms 9.93% H5F_block_write 0 0% 34.71% 1234ms 9.93% H5FD_write 0 0% 34.71% 1234ms 9.93% H5F__accum_write 0 0% 34.71% 1234ms 9.93% H5PB_write 0 0% 34.71% 1187ms 9.55% KSPSolve 2ms 0.016% 34.73% 1187ms 9.55% KSPSolve_Private 3ms 0.024% 34.75% 1182ms 9.51% KSPSolve_CG 1ms 0.008% 34.76% 1180ms 9.49% H5D__mpio_select_write 0 0% 34.76% 1133ms 9.11% PMPI_File_write_at_all 1104ms 8.88% 43.64% 1115ms 8.97% __GI_pwritev64 6ms 0.048% 43.69% 1038ms 8.35% H5D__chunk_cacheable 313ms 2.52% 46.21% 927ms 7.46% H5S_select_iterate 22ms 0.18% 46.38% 815ms 6.56% std::pow (inline) 45ms 0.36% 46.75% 781ms 6.28% __pow 38ms 0.31% 47.05% 726ms 5.84% __ieee754_pow_fma 216ms 1.74% 48.79% 671ms 5.40% MonodomainSolver::SetupLinearSystem 2ms 0.016% 48.81% 658ms 5.29% PCApply 2ms 0.016% 48.82% 654ms 5.26% PCApply_BJacobi_Singleblock 0 0% 48.82% 634ms 5.10% KSPSolve_PREONLY 0 0% 48.82% 631ms 5.08% MatSolve 627ms 5.04% 53.87% 631ms 5.08% MatSolve_SeqSBAIJ_1_NaturalOrdering 0 0% 53.87% 631ms 5.08% PCApply_ICC 411ms 3.31% 57.17% 626ms 5.04% CellLuoRudy1991FromCellML::VerifyStateVariables 51ms 0.41% 57.58% 624ms 5.02% H5D__chunk_set_sizes 0 0% 57.58% 555ms 4.46% MatMult 555ms 4.46% 62.05% 555ms 4.46% MatMult_SeqAIJ 512ms 4.12% 66.17% 512ms 4.12% [libchaste_heart.so] 0 0% 66.17% 491ms 3.95% KSP_PCApply.lto_priv.7 49ms 0.39% 66.56% 357ms 2.87% H5S_mpio_space_type 305ms 2.45% 69.01% 349ms 2.81% exp_inline (inline) 329ms 2.65% 71.66% 329ms 2.65% log_inline (inline) 31ms 0.25% 71.91% 285ms 2.29% H5VM_chunk_index 112ms 0.9% 72.81% 284ms 2.28% TimeStepper::TimeStepper 234ms 1.88% 74.69% 234ms 1.88% [libm.so.6] 217ms 1.75% 76.44% 217ms 1.75% H5VM_chunk_index_scaled 2ms 0.016% 76.45% 217ms 1.75% KSPConvergedDefault 4ms 0.032% 76.49% 170ms 1.37% MPI_Type_free 17ms 0.14% 76.62% 170ms 1.37% ompi_datatype_destroy 0 0% 76.62% 168ms 1.35% KSP_PCApply 55ms 0.44% 77.07% 158ms 1.27% __GI___libc_malloc 157ms 1.26% 78.33% 157ms 1.26% TimeStepper::CalculateNextTime 15ms 0.12% 78.45% 150ms 1.21% __GI___libc_free 39ms 0.31% 78.76% 142ms 1.14% ompi_datatype_release_args 2ms 0.016% 78.78% 142ms 1.14% ompi_info_register_framework_params 6ms 0.048% 78.83% 137ms 1.10% ompi_datatype_create 91ms 0.73% 79.56% 135ms 1.09% _int_free 25ms 0.2% 79.76% 124ms 1% AbstractCardiacCell::SetVoltage (partial-inline) 77ms 0.62% 80.38% 115ms 0.93% _int_malloc 82ms 0.66% 81.04% 110ms 0.88% AbstractOneStepIvpOdeSolver::Solve 26ms 0.21% 81.25% 109ms 0.88% H5S_set_version 32ms 0.26% 81.51% 109ms 0.88% std::__cxx11::basic_string::basic_string 105ms 0.84% 82.35% 105ms 0.84% ddot_ 50ms 0.4% 82.75% 100ms 0.8% H5S_hyper_add_span_element 98ms 0.79% 83.54% 98ms 0.79% __ieee754_log_fma 96ms 0.77% 84.31% 96ms 0.77% [libchaste_ode.so] 63ms 0.51% 84.82% 94ms 0.76% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 57ms 0.46% 85.28% 85ms 0.68% __libc_calloc 26ms 0.21% 85.49% 83ms 0.67% H5VM_array_calc 5ms 0.04% 85.53% 78ms 0.63% opal_datatype_create_desc 1ms 0.008% 85.54% 76ms 0.61% Hdf5DataWriter::PutUnlimitedVariable 29ms 0.23% 85.77% 75ms 0.6% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 53ms 0.43% 86.20% 74ms 0.6% AbstractParameterisedSystem::GetAnyVariable 19ms 0.15% 86.35% 72ms 0.58% AbstractCardiacCell::GetVoltage (partial-inline) 2ms 0.016% 86.36% 72ms 0.58% PMPI_Type_create_resized 50ms 0.4% 86.77% 71ms 0.57% AbstractParameterisedSystem::SetAnyVariable 71ms 0.57% 87.34% 71ms 0.57% ReplicatableVector::operator[] 0 0% 87.34% 70ms 0.56% PMPI_File_set_view 28ms 0.23% 87.56% 70ms 0.56% std::char_traits::length (inline) 18ms 0.14% 87.71% 68ms 0.55% ompi_datatype_set_args 66ms 0.53% 88.24% 66ms 0.53% asuint64 (inline) 45ms 0.36% 88.60% 65ms 0.52% TimeStepper::AdvanceOneTimeStep 0 0% 88.60% 65ms 0.52% VecTDot 0 0% 88.60% 64ms 0.51% VecTDot_Seq 0 0% 88.60% 64ms 0.51% VecXDot_Seq_Private.constprop.0