File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12642ms, 85.23% of 14833ms total Dropped 688 nodes (cum <= 74.17ms) flat flat% sum% cum cum% 0 0% 0% 14825ms 99.95% __libc_start_call_main 0 0% 0% 14825ms 99.95% __libc_start_main_impl 0 0% 0% 14825ms 99.95% _start 0 0% 0% 14822ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14822ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14822ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14822ms 99.93% main 0 0% 0% 14788ms 99.70% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14788ms 99.70% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14788ms 99.70% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 0 0% 0% 14767ms 99.56% AbstractCardiacProblem::Solve 3ms 0.02% 0.02% 11434ms 77.08% AbstractDynamicLinearPdeSolver::Solve 40ms 0.27% 0.29% 9167ms 61.80% AbstractCardiacTissue::SolveCellSystems 150ms 1.01% 1.30% 5669ms 38.22% AbstractCardiacCell::ComputeExceptVoltage 177ms 1.19% 2.49% 4860ms 32.76% AbstractOneStepIvpOdeSolver::InternalSolve 180ms 1.21% 3.71% 4121ms 27.78% EulerIvpOdeSolver::CalculateNextYValue 897ms 6.05% 9.76% 3883ms 26.18% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1718ms 11.58% 21.34% 3564ms 24.03% __GI___exp 1ms 0.0067% 21.34% 3259ms 21.97% MonodomainProblem::WriteOneStep 0 0% 21.34% 3095ms 20.87% H5Dwrite 4ms 0.027% 21.37% 3087ms 20.81% Hdf5DataWriter::PutVector 2ms 0.013% 21.38% 3066ms 20.67% H5D__write 86ms 0.58% 21.96% 2694ms 18.16% AbstractCardiacTissue::UpdateCaches (inline) 840ms 5.66% 27.63% 2571ms 17.33% CellLuoRudy1991FromCellML::GetIIonic 0 0% 27.63% 1810ms 12.20% H5D__chunk_collective_write 26ms 0.18% 27.80% 1810ms 12.20% H5F_set_coll_metadata_reads 1617ms 10.90% 38.70% 1773ms 11.95% __ieee754_exp_fma 16ms 0.11% 38.81% 1641ms 11.06% H5FD_s3comms_uriencode 2ms 0.013% 38.83% 1524ms 10.27% LinearSystem::Solve 0 0% 38.83% 1379ms 9.30% KSPSolve 7ms 0.047% 38.87% 1379ms 9.30% KSPSolve_Private 3ms 0.02% 38.89% 1366ms 9.21% KSPSolve_CG 3ms 0.02% 38.91% 1263ms 8.51% H5F_block_write 44ms 0.3% 39.21% 1262ms 8.51% 1ms 0.0067% 39.22% 1260ms 8.49% H5PB_write 2ms 0.013% 39.23% 1259ms 8.49% H5FD_write 0 0% 39.23% 1259ms 8.49% H5F__accum_write 1ms 0.0067% 39.24% 1159ms 7.81% H5D__mpio_select_write 9ms 0.061% 39.30% 1132ms 7.63% H5D__chunk_cacheable 1ms 0.0067% 39.30% 1066ms 7.19% PMPI_File_write_at_all 1039ms 7.00% 46.31% 1042ms 7.02% __GI_pwritev64 374ms 2.52% 48.83% 970ms 6.54% H5S_select_iterate 12ms 0.081% 48.91% 912ms 6.15% std::pow (inline) 77ms 0.52% 49.43% 899ms 6.06% __pow 125ms 0.84% 50.27% 821ms 5.53% __ieee754_pow_fma 1ms 0.0067% 50.28% 776ms 5.23% PCApply 2ms 0.013% 50.29% 771ms 5.20% PCApply_BJacobi_Singleblock 0 0% 50.29% 731ms 4.93% KSPSolve_PREONLY 1ms 0.0067% 50.30% 731ms 4.93% MatSolve 0 0% 50.30% 731ms 4.93% PCApply_ICC 718ms 4.84% 55.14% 730ms 4.92% MatSolve_SeqSBAIJ_1_NaturalOrdering 304ms 2.05% 57.19% 726ms 4.89% MonodomainSolver::SetupLinearSystem 296ms 2.00% 59.19% 627ms 4.23% CellLuoRudy1991FromCellML::VerifyStateVariables 75ms 0.51% 59.69% 621ms 4.19% H5D__chunk_set_sizes 4ms 0.027% 59.72% 615ms 4.15% MatMult 609ms 4.11% 63.82% 611ms 4.12% MatMult_SeqAIJ 0 0% 63.82% 561ms 3.78% KSP_PCApply.lto_priv.7 55ms 0.37% 64.19% 463ms 3.12% H5S_mpio_space_type 397ms 2.68% 66.87% 397ms 2.68% log_inline (inline) 3ms 0.02% 66.89% 270ms 1.82% KSPConvergedDefault 258ms 1.74% 68.63% 259ms 1.75% exp_inline (inline) 121ms 0.82% 69.45% 247ms 1.67% TimeStepper::TimeStepper 43ms 0.29% 69.74% 219ms 1.48% __GI___libc_malloc 0 0% 69.74% 217ms 1.46% KSP_PCApply 153ms 1.03% 70.77% 199ms 1.34% _int_malloc 114ms 0.77% 71.54% 195ms 1.31% top12 (inline) 107ms 0.72% 72.26% 189ms 1.27% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 19ms 0.13% 72.39% 181ms 1.22% H5VM_chunk_index 36ms 0.24% 72.63% 178ms 1.20% AbstractCardiacCell::SetVoltage (partial-inline) 173ms 1.17% 73.79% 173ms 1.17% std::isinf (inline) 2ms 0.013% 73.81% 171ms 1.15% Hdf5DataWriter::PutUnlimitedVariable 12ms 0.081% 73.89% 169ms 1.14% ompi_datatype_create 160ms 1.08% 74.97% 160ms 1.08% [libchaste_heart.so] 121ms 0.82% 75.78% 154ms 1.04% AbstractOneStepIvpOdeSolver::Solve 26ms 0.18% 75.96% 154ms 1.04% __GI___libc_free 133ms 0.9% 76.86% 152ms 1.02% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 7ms 0.047% 76.90% 152ms 1.02% MPI_Type_free 8ms 0.054% 76.96% 151ms 1.02% ompi_datatype_destroy 131ms 0.88% 77.84% 131ms 0.88% TimeStepper::CalculateNextTime 129ms 0.87% 78.71% 129ms 0.87% __ieee754_log_fma 50ms 0.34% 79.05% 127ms 0.86% _int_free 27ms 0.18% 79.23% 127ms 0.86% ompi_datatype_release_args 4ms 0.027% 79.26% 127ms 0.86% ompi_info_register_framework_params 123ms 0.83% 80.08% 123ms 0.83% ddot_ 14ms 0.094% 80.18% 119ms 0.8% H5S_set_version 118ms 0.8% 80.97% 118ms 0.8% __memcpy_avx_unaligned_erms 100ms 0.67% 81.65% 114ms 0.77% AbstractParameterisedSystem::SetAnyVariable 2ms 0.013% 81.66% 112ms 0.76% VecDuplicate 60ms 0.4% 82.07% 111ms 0.75% H5S_hyper_add_span_element 4ms 0.027% 82.09% 110ms 0.74% VecDuplicate_MPI 1ms 0.0067% 82.10% 109ms 0.73% PMPI_File_set_view 42ms 0.28% 82.38% 105ms 0.71% H5VM_array_calc 77ms 0.52% 82.90% 101ms 0.68% AbstractParameterisedSystem::GetAnyVariable 2ms 0.013% 82.92% 101ms 0.68% ompi_datatype_duplicate 0 0% 82.92% 99ms 0.67% PMPI_Type_create_resized 2ms 0.013% 82.93% 99ms 0.67% VecNorm 51ms 0.34% 83.27% 98ms 0.66% std::__cxx11::basic_string::basic_string 91ms 0.61% 83.89% 91ms 0.61% H5VM_chunk_index_scaled 0 0% 83.89% 88ms 0.59% VecNorm_Seq 4ms 0.027% 83.91% 86ms 0.58% H5D__chunk_allocated 31ms 0.21% 84.12% 86ms 0.58% ompi_datatype_set_args 38ms 0.26% 84.38% 84ms 0.57% AbstractCardiacCell::GetVoltage (partial-inline) 83ms 0.56% 84.94% 83ms 0.56% asuint64 (inline) 32ms 0.22% 85.15% 80ms 0.54% H5S_select_iter_next 1ms 0.0067% 85.16% 79ms 0.53% H5D__select_write 0 0% 85.16% 78ms 0.53% H5Dgather 2ms 0.013% 85.17% 77ms 0.52% H5D__contig_fill 2ms 0.013% 85.19% 76ms 0.51% VecCreate 3ms 0.02% 85.21% 75ms 0.51% PMPI_Type_vector 3ms 0.02% 85.23% 75ms 0.51% opal_datatype_create_desc