File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 344ms, 89.35% of 385ms total Dropped 196 nodes (cum <= 1.93ms) flat flat% sum% cum cum% 0 0% 0% 376ms 97.66% __libc_start_call_main 0 0% 0% 376ms 97.66% __libc_start_main_impl 0 0% 0% 376ms 97.66% _start 0 0% 0% 374ms 97.14% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 374ms 97.14% CxxTest::TestRunner::runAllTests 0 0% 0% 374ms 97.14% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 374ms 97.14% main 0 0% 0% 333ms 86.49% CxxTest::RealTestDescription::run 0 0% 0% 333ms 86.49% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 333ms 86.49% CxxTest::TestRunner::runTest (inline) 0 0% 0% 333ms 86.49% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 333ms 86.49% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 329ms 85.45% AbstractCardiacProblem::Solve 0 0% 0% 328ms 85.19% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 284ms 73.77% LinearSystem::Solve 0 0% 0% 281ms 72.99% KSPSolve 0 0% 0% 281ms 72.99% KSPSolve_CG 1ms 0.26% 0.26% 281ms 72.99% KSPSolve_Private 0 0% 0.26% 130ms 33.77% KSP_PCApply.lto_priv.7 0 0% 0.26% 127ms 32.99% PCApply 0 0% 0.26% 125ms 32.47% PCApply_BJacobi_Singleblock 0 0% 0.26% 101ms 26.23% KSPSolve_PREONLY (partial-inline) 0 0% 0.26% 95ms 24.68% MatSolve 94ms 24.42% 24.68% 95ms 24.68% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 24.68% 95ms 24.68% PCApply_ICC 0 0% 24.68% 74ms 19.22% MatMult 4ms 1.04% 25.71% 74ms 19.22% MatMult_SeqAIJ 70ms 18.18% 43.90% 70ms 18.18% MatMult_SeqAIJ_Inode (inline) 58ms 15.06% 58.96% 58ms 15.06% ddot_ 0 0% 58.96% 44ms 11.43% VecTDot 0 0% 58.96% 44ms 11.43% VecTDot_Seq 0 0% 58.96% 44ms 11.43% VecXDot_Seq_Private.constprop.0 0 0% 58.96% 39ms 10.13% AbstractCardiacTissue::SolveCellSystems 0 0% 58.96% 38ms 9.87% CxxTest::RealWorldDescription::setUp 0 0% 58.96% 38ms 9.87% PetscInitialize 0 0% 58.96% 38ms 9.87% PetscSetup::setUpWorld 0 0% 58.96% 38ms 9.87% PetscSetupUtils::CommonSetup 0 0% 58.96% 38ms 9.87% PetscSetupUtils::InitialisePetsc 0 0% 58.96% 37ms 9.61% PMPI_Init_thread 0 0% 58.96% 37ms 9.61% ompi_mpi_init 1ms 0.26% 59.22% 32ms 8.31% 0 0% 59.22% 26ms 6.75% AbstractCardiacCell::ComputeExceptVoltage 0 0% 59.22% 25ms 6.49% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 59.22% 24ms 6.23% orte_init 3ms 0.78% 60.00% 23ms 5.97% EulerIvpOdeSolver::CalculateNextYValue 0 0% 60.00% 21ms 5.45% MatNullSpaceRemove 4ms 1.04% 61.04% 20ms 5.19% CellLuoRudy1991FromCellML::EvaluateYDerivatives 9ms 2.34% 63.38% 19ms 4.94% __GI___exp 0 0% 63.38% 16ms 4.16% hwloc_topology_load 0 0% 63.38% 15ms 3.90% mca_base_framework_open 0 0% 63.38% 14ms 3.64% VecNorm 0 0% 63.38% 14ms 3.64% VecNorm_Seq 0 0% 63.38% 14ms 3.64% hwloc_linux_get_tid_last_cpu_location 0 0% 63.38% 14ms 3.64% mca_base_framework_components_register 0 0% 63.38% 14ms 3.64% mca_base_framework_register 0 0% 63.38% 13ms 3.38% VecMAXPY 12ms 3.12% 66.49% 13ms 3.38% VecMAXPY_Seq 0 0% 66.49% 13ms 3.38% __GI__dl_catch_exception 0 0% 66.49% 13ms 3.38% _dl_catch_error 0 0% 66.49% 13ms 3.38% _dlerror_run 0 0% 66.49% 13ms 3.38% opal_stackframe_output 0 0% 66.49% 12ms 3.12% VecAYPX 12ms 3.12% 69.61% 12ms 3.12% VecAYPX_Seq 0 0% 69.61% 11ms 2.86% ___dlopen 0 0% 69.61% 11ms 2.86% _dl_init 0 0% 69.61% 11ms 2.86% _dl_open 0 0% 69.61% 11ms 2.86% call_init (inline) 0 0% 69.61% 11ms 2.86% dl_open_worker 0 0% 69.61% 11ms 2.86% dlopen_doit 0 0% 69.61% 11ms 2.86% dlopen_implementation (inline) 0 0% 69.61% 11ms 2.86% mca_base_component_find 0 0% 69.61% 11ms 2.86% mca_base_component_repository_open 1ms 0.26% 69.87% 10ms 2.60% AbstractCardiacTissue::UpdateCaches (inline) 9ms 2.34% 72.21% 10ms 2.60% __ieee754_exp_fma 4ms 1.04% 73.25% 9ms 2.34% CellLuoRudy1991FromCellML::GetIIonic 0 0% 73.25% 8ms 2.08% VecMDot 8ms 2.08% 75.32% 8ms 2.08% VecMDot_Seq 0 0% 75.32% 8ms 2.08% VecMXDot_Private 0 0% 75.32% 7ms 1.82% KSP_PCApply (partial-inline) 0 0% 75.32% 7ms 1.82% _dl_start_user 0 0% 75.32% 7ms 1.82% dl_open_worker_begin 0 0% 75.32% 7ms 1.82% mca_base_framework_components_open 0 0% 75.32% 6ms 1.56% VecAXPY 0 0% 75.32% 6ms 1.56% VecAXPY_Seq 6ms 1.56% 76.88% 6ms 1.56% __memset_avx512_unaligned_erms 2ms 0.52% 77.40% 6ms 1.56% boost::serialization::singleton::get_instance 6ms 1.56% 78.96% 6ms 1.56% daxpy_ 0 0% 78.96% 6ms 1.56% mca_topo_base_dist_graph_neighbors_count 0 0% 78.96% 6ms 1.56% orte_ess_base_proc_binding 0 0% 78.96% 5ms 1.30% PetscMemzero (inline) 0 0% 78.96% 5ms 1.30% VecDuplicate 5ms 1.30% 80.26% 5ms 1.30% __GI___libc_read 0 0% 80.26% 5ms 1.30% opal_hwloc_base_get_topology 1ms 0.26% 80.52% 4ms 1.04% BidomainSolver::SetupLinearSystem 0 0% 80.52% 4ms 1.04% VecDuplicate_Seq 0 0% 80.52% 4ms 1.04% VecSet 1ms 0.26% 80.78% 4ms 1.04% VecSet_Seq (partial-inline) 4ms 1.04% 81.82% 4ms 1.04% __GI___clock_nanosleep 0 0% 81.82% 4ms 1.04% __GI___nanosleep 4ms 1.04% 82.86% 4ms 1.04% __memcpy_avx512_unaligned_erms 1ms 0.26% 83.12% 4ms 1.04% _dl_lookup_symbol_x 1ms 0.26% 83.38% 4ms 1.04% _dl_map_object 0 0% 83.38% 4ms 1.04% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 83.38% 4ms 1.04% usleep 0 0% 83.38% 3ms 0.78% AbstractCardiacProblem::Initialise 0 0% 83.38% 3ms 0.78% CxxTest::RealWorldDescription::tearDown 0 0% 83.38% 3ms 0.78% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 83.38% 3ms 0.78% PetscFinalize 0 0% 83.38% 3ms 0.78% PetscMemcpy (inline) 0 0% 83.38% 3ms 0.78% PetscSetup::tearDownWorld 0 0% 83.38% 3ms 0.78% PetscSetupUtils::CommonFinalize 0 0% 83.38% 3ms 0.78% VecCreate 0 0% 83.38% 3ms 0.78% XOpenDisplay 0 0% 83.38% 3ms 0.78% [hwloc_gl.so] 0 0% 83.38% 3ms 0.78% [libxcb.so.1.1.0] 0 0% 83.38% 3ms 0.78% _XConnectXCB 3ms 0.78% 84.16% 3ms 0.78% __GI_socket 1ms 0.26% 84.42% 3ms 0.78% __cxa_finalize 0 0% 84.42% 3ms 0.78% _dl_call_fini 0 0% 84.42% 3ms 0.78% _dl_open_relocate_one_object (inline) 0 0% 84.42% 3ms 0.78% _dl_relocate_object 0 0% 84.42% 3ms 0.78% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 84.42% 3ms 0.78% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 3ms 0.78% 85.19% 3ms 0.78% do_lookup_x 0 0% 85.19% 3ms 0.78% elf_dynamic_do_Rela (inline) 0 0% 85.19% 3ms 0.78% ompi_mpi_finalize 3ms 0.78% 85.97% 3ms 0.78% std::_Rb_tree_increment 0 0% 85.97% 3ms 0.78% xcb_connect_to_display_with_auth_info 0 0% 85.97% 2ms 0.52% AbstractFeVolumeIntegralAssembler::AssembleOnElement 0 0% 85.97% 2ms 0.52% AbstractFeVolumeIntegralAssembler::DoAssemble 1ms 0.26% 86.23% 2ms 0.52% KSPConvergedDefault 0 0% 86.23% 2ms 0.52% PetscCommDuplicate 0 0% 86.23% 2ms 0.52% PetscHeaderCreate_Private 0 0% 86.23% 2ms 0.52% PetscMallocA 0 0% 86.23% 2ms 0.52% PetscMallocAlign (partial-inline) 0 0% 86.23% 2ms 0.52% TrianglesMeshReader::GetNextItemFromStream 0 0% 86.23% 2ms 0.52% VecCopy 0 0% 86.23% 2ms 0.52% VecCopy_Seq (partial-inline) 0 0% 86.23% 2ms 0.52% VecCreate_Seq 0 0% 86.23% 2ms 0.52% VecDestroy 0 0% 86.23% 2ms 0.52% VecSetType 0 0% 86.23% 2ms 0.52% [hwloc_pci.so] 1ms 0.26% 86.49% 2ms 0.52% [libpciaccess.so.0.11.1] 0 0% 86.49% 2ms 0.52% _GLOBAL__sub_I_ChasteParameters_3_4.cpp 2ms 0.52% 87.01% 2ms 0.52% __GI___fstat64 0 0% 87.01% 2ms 0.52% __GI_exit 0 0% 87.01% 2ms 0.52% __GI_getaddrinfo 0 0% 87.01% 2ms 0.52% __dlclose 2ms 0.52% 87.53% 2ms 0.52% __libc_openat64 0 0% 87.53% 2ms 0.52% __run_exit_handlers 2ms 0.52% 88.05% 2ms 0.52% __strcmp_evex 0 0% 88.05% 2ms 0.52% _dl_close 0 0% 88.05% 2ms 0.52% _dl_close_worker (inline) 0 0% 88.05% 2ms 0.52% _dl_fini 0 0% 88.05% 2ms 0.52% _dl_fixup 0 0% 88.05% 2ms 0.52% _dl_map_object_deps 0 0% 88.05% 2ms 0.52% _dl_runtime_resolve_xsavec 1ms 0.26% 88.31% 2ms 0.52% _int_malloc 1ms 0.26% 88.57% 2ms 0.52% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 88.57% 2ms 0.52% clone3 0 0% 88.57% 2ms 0.52% elf_machine_rela (inline) 0 0% 88.57% 2ms 0.52% event_base_loop 0 0% 88.57% 2ms 0.52% hwloc_topology_export_xmlbuffer 0 0% 88.57% 2ms 0.52% mca_base_component_repository_release 0 0% 88.57% 2ms 0.52% mca_base_component_var_register 0 0% 88.57% 2ms 0.52% mca_base_components_close 0 0% 88.57% 2ms 0.52% mca_base_framework_close 0 0% 88.57% 2ms 0.52% mca_base_var_group_register 0 0% 88.57% 2ms 0.52% mca_base_var_register 0 0% 88.57% 2ms 0.52% opal_init_util 0 0% 88.57% 2ms 0.52% openaux 0 0% 88.57% 2ms 0.52% pci_get_strings 0 0% 88.57% 2ms 0.52% resolve_map (inline) 0 0% 88.57% 2ms 0.52% start_thread 1ms 0.26% 88.83% 2ms 0.52% std::istream::operator>> (inline) 2ms 0.52% 89.35% 2ms 0.52% strcmp