File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 93987ms, 91.86% of 102319ms total Dropped 1092 nodes (cum <= 511.60ms) flat flat% sum% cum cum% 0 0% 0% 102307ms 100% __libc_start_call_main 0 0% 0% 102307ms 100% __libc_start_main_impl 0 0% 0% 102307ms 100% _start 0 0% 0% 102305ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 102305ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 102305ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 102305ms 100% main 0 0% 0% 102269ms 100% AbstractConvergenceTester::Converge 0 0% 0% 102269ms 100% CxxTest::RealTestDescription::run 0 0% 0% 102269ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 102269ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 102269ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 102269ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 1ms 0.00098% 0.00098% 101329ms 99.03% AbstractCardiacProblem::Solve 5ms 0.0049% 0.0059% 100553ms 98.27% AbstractDynamicLinearPdeSolver::Solve 5ms 0.0049% 0.011% 57263ms 55.97% LinearSystem::Solve 6ms 0.0059% 0.017% 56812ms 55.52% KSPSolve 4ms 0.0039% 0.021% 56806ms 55.52% KSPSolve_Private 8ms 0.0078% 0.028% 56449ms 55.17% KSPSolve_SYMMLQ 298ms 0.29% 0.32% 35957ms 35.14% AbstractCardiacTissue::SolveCellSystems 3ms 0.0029% 0.32% 31754ms 31.03% PCApply 3ms 0.0029% 0.33% 31740ms 31.02% PCApply_BJacobi_Singleblock 2ms 0.002% 0.33% 29956ms 29.28% KSPSolve_PREONLY (partial-inline) 5ms 0.0049% 0.33% 29049ms 28.39% PCApply_ICC 4ms 0.0039% 0.34% 29044ms 28.39% MatSolve 28655ms 28.01% 28.34% 29040ms 28.38% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 733ms 0.72% 29.06% 27992ms 27.36% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 7ms 0.0068% 29.06% 27098ms 26.48% KSP_PCApply.lto_priv.18 6004ms 5.87% 34.93% 24692ms 24.13% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 7ms 0.0068% 34.94% 20024ms 19.57% MatMult 221ms 0.22% 35.16% 20017ms 19.56% MatMult_SeqAIJ (partial-inline) 19646ms 19.20% 54.36% 20014ms 19.56% MatMult_SeqAIJ_Inode (inline) 1860ms 1.82% 56.17% 12958ms 12.66% CardiacNewtonSolver::Solve 4111ms 4.02% 60.19% 7511ms 7.34% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 149ms 0.15% 60.34% 6986ms 6.83% AbstractCardiacTissue::UpdateCaches (inline) 1092ms 1.07% 61.41% 6858ms 6.70% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 1289ms 1.26% 62.66% 6540ms 6.39% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 896ms 0.88% 63.54% 6485ms 6.34% BidomainSolver::SetupLinearSystem 1ms 0.00098% 63.54% 6265ms 6.12% KSP_PCApply (partial-inline) 5ms 0.0049% 63.55% 5839ms 5.71% KSPConvergedDefault 5534ms 5.41% 68.95% 5534ms 5.41% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 0 0% 68.95% 3219ms 3.15% boost::numeric::ublas::norm_inf (inline) 2228ms 2.18% 71.13% 3219ms 3.15% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 71.13% 3219ms 3.15% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 71.13% 3219ms 3.15% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 3156ms 3.08% 74.22% 3207ms 3.13% __ieee754_log_fma 9ms 0.0088% 74.23% 2787ms 2.72% MatNullSpaceRemove 2634ms 2.57% 76.80% 2634ms 2.57% ddot_ 23ms 0.022% 76.82% 2443ms 2.39% std::pow (inline) 1558ms 1.52% 78.35% 2429ms 2.37% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 280ms 0.27% 78.62% 2411ms 2.36% __pow 2290ms 2.24% 80.86% 2290ms 2.24% __memcpy_avx512_unaligned_erms 0 0% 80.86% 2259ms 2.21% PetscMemcpy (inline) 6ms 0.0059% 80.86% 2190ms 2.14% VecDot 2ms 0.002% 80.86% 2184ms 2.13% VecDot_Seq 3ms 0.0029% 80.87% 2182ms 2.13% VecXDot_Seq_Private.constprop.0 282ms 0.28% 81.14% 2106ms 2.06% __ieee754_pow_fma 8ms 0.0078% 81.15% 1970ms 1.93% VecAXPY 6ms 0.0059% 81.16% 1962ms 1.92% VecAXPY_Seq 1939ms 1.90% 83.05% 1939ms 1.90% daxpy_ 19ms 0.019% 83.07% 1899ms 1.86% VecCopy 3ms 0.0029% 83.07% 1879ms 1.84% VecCopy_Seq (partial-inline) 3ms 0.0029% 83.08% 1728ms 1.69% VecMDot 9ms 0.0088% 83.09% 1725ms 1.69% VecMXDot_Private 1703ms 1.66% 84.75% 1712ms 1.67% VecMDot_Seq 1ms 0.00098% 84.75% 1560ms 1.52% AbstractFeVolumeIntegralAssembler::DoAssemble 18ms 0.018% 84.77% 1292ms 1.26% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1211ms 1.18% 85.95% 1247ms 1.22% exp_inline (inline) 0 0% 85.95% 1076ms 1.05% AbstractFeAssemblerInterface::AssembleMatrix (inline) 6ms 0.0059% 85.96% 1050ms 1.03% VecMAXPY 1039ms 1.02% 86.97% 1044ms 1.02% VecMAXPY_Seq 0 0% 86.97% 985ms 0.96% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 86.97% 985ms 0.96% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 86.97% 985ms 0.96% boost_numeric_ublas_abs (inline) 985ms 0.96% 87.94% 985ms 0.96% std::abs (inline) 4ms 0.0039% 87.94% 834ms 0.82% boost::numeric::ublas::matrix_assign (inline) 176ms 0.17% 88.11% 828ms 0.81% boost::numeric::ublas::indexing_matrix_assign 534ms 0.52% 88.63% 806ms 0.79% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 0 0% 88.63% 795ms 0.78% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 88.63% 795ms 0.78% CuboidMeshConstructor::Construct 2ms 0.002% 88.64% 795ms 0.78% DistributedTetrahedralMesh::ConstructCuboid 771ms 0.75% 89.39% 771ms 0.75% [libchaste_heart.so] 2ms 0.002% 89.39% 726ms 0.71% VecNorm 0 0% 89.39% 720ms 0.7% BidomainProblem::WriteOneStep 0 0% 89.39% 720ms 0.7% VecNorm_Seq 0 0% 89.39% 710ms 0.69% Element::Element 6ms 0.0059% 89.40% 701ms 0.69% VecScale 4ms 0.0039% 89.40% 695ms 0.68% VecScale_Seq 2ms 0.002% 89.40% 692ms 0.68% AbstractTetrahedralElement::CalculateJacobian 690ms 0.67% 90.08% 690ms 0.67% dscal_ 6ms 0.0059% 90.08% 656ms 0.64% BidomainAssembler::ComputeMatrixTerm 6ms 0.0059% 90.09% 649ms 0.63% boost::numeric::ublas::c_matrix::c_matrix (inline) 0 0% 90.09% 648ms 0.63% AbstractTetrahedralElement::AbstractTetrahedralElement 563ms 0.55% 90.64% 563ms 0.55% __memset_avx512_unaligned_erms 161ms 0.16% 90.80% 561ms 0.55% AbstractBidomainSolver::CheckCompatibilityCondition 0 0% 90.80% 561ms 0.55% AbstractBidomainSolver::FinaliseLinearSystem 0 0% 90.80% 554ms 0.54% PetscMemzero (inline) 1ms 0.00098% 90.80% 551ms 0.54% VecDuplicate 550ms 0.54% 91.33% 550ms 0.54% log_inline (inline) 534ms 0.52% 91.86% 534ms 0.52% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline)