File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 9916ms, 87.17% of 11375ms total Dropped 699 nodes (cum <= 56.88ms) flat flat% sum% cum cum% 0 0% 0% 11368ms 99.94% __libc_start_call_main 0 0% 0% 11368ms 99.94% __libc_start_main_impl 0 0% 0% 11368ms 99.94% _start 0 0% 0% 11366ms 99.92% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 11366ms 99.92% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 11366ms 99.92% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 11366ms 99.92% main 0 0% 0% 11325ms 99.56% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 11325ms 99.56% CxxTest::TestRunner::runTest (inline) 0 0% 0% 11325ms 99.56% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 1ms 0.0088% 0.0088% 11308ms 99.41% AbstractCardiacProblem::Solve 0 0% 0.0088% 8858ms 77.87% AbstractDynamicLinearPdeSolver::Solve 51ms 0.45% 0.46% 7036ms 61.85% AbstractCardiacTissue::SolveCellSystems 69ms 0.61% 1.06% 4240ms 37.27% AbstractCardiacCell::ComputeExceptVoltage 88ms 0.77% 1.84% 3709ms 32.61% AbstractOneStepIvpOdeSolver::InternalSolve 142ms 1.25% 3.09% 3151ms 27.70% EulerIvpOdeSolver::CalculateNextYValue 696ms 6.12% 9.20% 2977ms 26.17% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1373ms 12.07% 21.27% 2709ms 23.82% __GI___exp 1ms 0.0088% 21.28% 2399ms 21.09% MonodomainProblem::WriteOneStep 0 0% 21.28% 2344ms 20.61% Hdf5DataWriter::PutVector 2ms 0.018% 21.30% 2316ms 20.36% H5Dwrite 1ms 0.0088% 21.31% 2296ms 20.18% H5D__write 87ms 0.76% 22.07% 2275ms 20.00% AbstractCardiacTissue::UpdateCaches (inline) 638ms 5.61% 27.68% 2129ms 18.72% CellLuoRudy1991FromCellML::GetIIonic 0 0% 27.68% 1470ms 12.92% H5D__chunk_collective_write 15ms 0.13% 27.82% 1470ms 12.92% H5F_set_coll_metadata_reads 17ms 0.15% 27.96% 1303ms 11.45% H5FD_s3comms_uriencode 1026ms 9.02% 36.98% 1274ms 11.20% __ieee754_exp_fma 0 0% 36.98% 1153ms 10.14% LinearSystem::Solve 0 0% 36.98% 1075ms 9.45% KSPSolve 4ms 0.035% 37.02% 1075ms 9.45% KSPSolve_Private 41ms 0.36% 37.38% 1066ms 9.37% 2ms 0.018% 37.40% 1066ms 9.37% KSPSolve_CG 3ms 0.026% 37.42% 1058ms 9.30% H5F_block_write 2ms 0.018% 37.44% 1055ms 9.27% H5FD_write 0 0% 37.44% 1055ms 9.27% H5F__accum_write 0 0% 37.44% 1055ms 9.27% H5PB_write 1ms 0.0088% 37.45% 1000ms 8.79% H5D__mpio_select_write 0 0% 37.45% 917ms 8.06% PMPI_File_write_at_all 903ms 7.94% 45.39% 905ms 7.96% __GI_pwritev64 4ms 0.035% 45.42% 798ms 7.02% std::pow (inline) 81ms 0.71% 46.14% 794ms 6.98% __pow 8ms 0.07% 46.21% 775ms 6.81% H5D__chunk_cacheable 67ms 0.59% 46.80% 710ms 6.24% __ieee754_pow_fma 207ms 1.82% 48.62% 680ms 5.98% H5S_select_iterate 320ms 2.81% 51.43% 655ms 5.76% MonodomainSolver::SetupLinearSystem 2ms 0.018% 51.45% 605ms 5.32% PCApply 0 0% 51.45% 597ms 5.25% PCApply_BJacobi_Singleblock 0 0% 51.45% 569ms 5.00% KSPSolve_PREONLY 1ms 0.0088% 51.45% 567ms 4.98% MatSolve 0 0% 51.45% 567ms 4.98% PCApply_ICC 560ms 4.92% 56.38% 566ms 4.98% MatSolve_SeqSBAIJ_1_NaturalOrdering 54ms 0.47% 56.85% 483ms 4.25% H5D__chunk_set_sizes 4ms 0.035% 56.89% 399ms 3.51% MatMult 393ms 3.45% 60.34% 395ms 3.47% MatMult_SeqAIJ 0 0% 60.34% 374ms 3.29% KSP_PCApply.lto_priv.7 361ms 3.17% 63.52% 361ms 3.17% log_inline (inline) 58ms 0.51% 64.03% 323ms 2.84% H5S_mpio_space_type 178ms 1.56% 65.59% 315ms 2.77% CellLuoRudy1991FromCellML::VerifyStateVariables 3ms 0.026% 65.62% 297ms 2.61% KSPConvergedDefault 236ms 2.07% 67.69% 246ms 2.16% exp_inline (inline) 0 0% 67.69% 233ms 2.05% KSP_PCApply 165ms 1.45% 69.14% 206ms 1.81% top12 (inline) 79ms 0.69% 69.84% 200ms 1.76% TimeStepper::TimeStepper 188ms 1.65% 71.49% 188ms 1.65% [libchaste_heart.so] 34ms 0.3% 71.79% 186ms 1.64% AbstractCardiacCell::SetVoltage (partial-inline) 6ms 0.053% 71.84% 145ms 1.27% H5VM_chunk_index 119ms 1.05% 72.89% 141ms 1.24% AbstractParameterisedSystem::SetAnyVariable 36ms 0.32% 73.20% 140ms 1.23% __GI___libc_malloc 131ms 1.15% 74.36% 131ms 1.15% ddot_ 102ms 0.9% 75.25% 130ms 1.14% _int_malloc 129ms 1.13% 76.39% 129ms 1.13% asuint64 (inline) 16ms 0.14% 76.53% 128ms 1.13% __GI___libc_free 3ms 0.026% 76.55% 119ms 1.05% MPI_Type_free 2ms 0.018% 76.57% 119ms 1.05% ompi_datatype_destroy 117ms 1.03% 77.60% 117ms 1.03% TimeStepper::CalculateNextTime 42ms 0.37% 77.97% 111ms 0.98% _int_free 8ms 0.07% 78.04% 111ms 0.98% ompi_datatype_create 75ms 0.66% 78.70% 109ms 0.96% AbstractOneStepIvpOdeSolver::Solve 108ms 0.95% 79.65% 108ms 0.95% __ieee754_log_fma 22ms 0.19% 79.84% 108ms 0.95% ompi_datatype_release_args 3ms 0.026% 79.87% 108ms 0.95% ompi_info_register_framework_params 89ms 0.78% 80.65% 102ms 0.9% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 102ms 0.9% 81.55% 102ms 0.9% __memcpy_avx512_unaligned_erms 2ms 0.018% 81.56% 100ms 0.88% PMPI_File_set_view 42ms 0.37% 81.93% 99ms 0.87% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 15ms 0.13% 82.07% 94ms 0.83% H5S_set_version 36ms 0.32% 82.38% 92ms 0.81% H5S_hyper_add_span_element 2ms 0.018% 82.40% 87ms 0.76% VecTDot 69ms 0.61% 83.01% 86ms 0.76% AbstractParameterisedSystem::GetAnyVariable 1ms 0.0088% 83.02% 83ms 0.73% VecTDot_Seq 1ms 0.0088% 83.02% 82ms 0.72% VecXDot_Seq_Private.constprop.0 0 0% 83.02% 82ms 0.72% std::vector::_M_assign_aux (inline) 0 0% 83.02% 82ms 0.72% std::vector::assign (inline) 80ms 0.7% 83.73% 80ms 0.7% H5VM_array_offset_pre 32ms 0.28% 84.01% 79ms 0.69% H5VM_array_calc 7ms 0.062% 84.07% 77ms 0.68% std::__copy_move::__copy_m (inline) 0 0% 84.07% 77ms 0.68% std::__copy_move_a (inline) 0 0% 84.07% 77ms 0.68% std::__copy_move_a1 (inline) 0 0% 84.07% 77ms 0.68% std::__copy_move_a2 (inline) 0 0% 84.07% 77ms 0.68% std::copy (inline) 0 0% 84.07% 75ms 0.66% VecNorm 0 0% 84.07% 73ms 0.64% VecNorm_Seq 1ms 0.0088% 84.08% 69ms 0.61% VecDuplicate 44ms 0.39% 84.47% 68ms 0.6% TimeStepper::AdvanceOneTimeStep 5ms 0.044% 84.51% 68ms 0.6% VecDuplicate_MPI 66ms 0.58% 85.09% 66ms 0.58% [libm.so.6] 65ms 0.57% 85.66% 65ms 0.57% ReplicatableVector::operator[] 3ms 0.026% 85.69% 65ms 0.57% ompi_datatype_duplicate 20ms 0.18% 85.86% 64ms 0.56% AbstractCardiacCell::GetVoltage (partial-inline) 63ms 0.55% 86.42% 63ms 0.55% TimeStepper::GetNextTimeStep 1ms 0.0088% 86.43% 61ms 0.54% PMPI_Type_create_resized 59ms 0.52% 86.95% 59ms 0.52% H5VM_chunk_index_scaled 26ms 0.23% 87.17% 57ms 0.5% H5S_select_iter_next