File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12544ms, 85.06% of 14747ms total Dropped 756 nodes (cum <= 73.73ms) flat flat% sum% cum cum% 0 0% 0% 14741ms 100% __libc_start_call_main 0 0% 0% 14741ms 100% __libc_start_main_impl 0 0% 0% 14741ms 100% _start 0 0% 0% 14738ms 99.94% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14738ms 99.94% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14738ms 99.94% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14738ms 99.94% main 0 0% 0% 14706ms 99.72% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14706ms 99.72% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14706ms 99.72% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 1ms 0.0068% 0.0068% 14684ms 99.57% AbstractCardiacProblem::Solve 0 0% 0.0068% 11396ms 77.28% AbstractDynamicLinearPdeSolver::Solve 38ms 0.26% 0.26% 9143ms 62.00% AbstractCardiacTissue::SolveCellSystems 145ms 0.98% 1.25% 5571ms 37.78% AbstractCardiacCell::ComputeExceptVoltage 95ms 0.64% 1.89% 4795ms 32.52% AbstractOneStepIvpOdeSolver::InternalSolve 219ms 1.49% 3.38% 4182ms 28.36% EulerIvpOdeSolver::CalculateNextYValue 954ms 6.47% 9.85% 3903ms 26.47% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1709ms 11.59% 21.43% 3597ms 24.39% __GI___exp 3ms 0.02% 21.46% 3215ms 21.80% MonodomainProblem::WriteOneStep 4ms 0.027% 21.48% 3072ms 20.83% Hdf5DataWriter::PutVector 0 0% 21.48% 3040ms 20.61% H5Dwrite 2ms 0.014% 21.50% 3011ms 20.42% H5D__write 91ms 0.62% 22.11% 2682ms 18.19% AbstractCardiacTissue::UpdateCaches (inline) 759ms 5.15% 27.26% 2543ms 17.24% CellLuoRudy1991FromCellML::GetIIonic 0 0% 27.26% 1813ms 12.29% H5D__chunk_collective_write 20ms 0.14% 27.40% 1813ms 12.29% H5F_set_coll_metadata_reads 1653ms 11.21% 38.60% 1808ms 12.26% __ieee754_exp_fma 15ms 0.1% 38.71% 1579ms 10.71% H5FD_s3comms_uriencode 7ms 0.047% 38.75% 1503ms 10.19% LinearSystem::Solve 0 0% 38.75% 1367ms 9.27% KSPSolve 3ms 0.02% 38.77% 1367ms 9.27% KSPSolve_Private 9ms 0.061% 38.84% 1353ms 9.17% KSPSolve_CG 47ms 0.32% 39.15% 1219ms 8.27% 1ms 0.0068% 39.16% 1216ms 8.25% H5F_block_write 3ms 0.02% 39.18% 1215ms 8.24% H5PB_write 1ms 0.0068% 39.19% 1212ms 8.22% H5F__accum_write 1ms 0.0068% 39.19% 1211ms 8.21% H5FD_write 7ms 0.047% 39.24% 1143ms 7.75% H5D__mpio_select_write 7ms 0.047% 39.29% 1095ms 7.43% H5D__chunk_cacheable 2ms 0.014% 39.30% 1022ms 6.93% PMPI_File_write_at_all 1003ms 6.80% 46.10% 1003ms 6.80% __GI_pwritev64 341ms 2.31% 48.42% 920ms 6.24% H5S_select_iterate 13ms 0.088% 48.50% 898ms 6.09% std::pow (inline) 102ms 0.69% 49.20% 884ms 5.99% __pow 72ms 0.49% 49.68% 782ms 5.30% __ieee754_pow_fma 0 0% 49.68% 753ms 5.11% PCApply 1ms 0.0068% 49.69% 747ms 5.07% PCApply_BJacobi_Singleblock 315ms 2.14% 51.83% 731ms 4.96% MonodomainSolver::SetupLinearSystem 0 0% 51.83% 706ms 4.79% KSPSolve_PREONLY 1ms 0.0068% 51.83% 704ms 4.77% PCApply_ICC 3ms 0.02% 51.85% 703ms 4.77% MatSolve 685ms 4.65% 56.50% 700ms 4.75% MatSolve_SeqSBAIJ_1_NaturalOrdering 293ms 1.99% 58.49% 694ms 4.71% CellLuoRudy1991FromCellML::VerifyStateVariables 58ms 0.39% 58.88% 600ms 4.07% H5D__chunk_set_sizes 2ms 0.014% 58.89% 584ms 3.96% MatMult 581ms 3.94% 62.83% 582ms 3.95% MatMult_SeqAIJ 1ms 0.0068% 62.84% 574ms 3.89% KSP_PCApply.lto_priv.7 61ms 0.41% 63.25% 475ms 3.22% H5S_mpio_space_type 367ms 2.49% 65.74% 367ms 2.49% log_inline (inline) 295ms 2.00% 67.74% 306ms 2.07% exp_inline (inline) 119ms 0.81% 68.55% 240ms 1.63% TimeStepper::TimeStepper 2ms 0.014% 68.56% 233ms 1.58% KSPConvergedDefault 204ms 1.38% 69.95% 204ms 1.38% std::isinf (inline) 131ms 0.89% 70.83% 201ms 1.36% top12 (inline) 51ms 0.35% 71.18% 199ms 1.35% __GI___libc_malloc 197ms 1.34% 72.52% 197ms 1.34% [libchaste_heart.so] 15ms 0.1% 72.62% 185ms 1.25% H5VM_chunk_index 33ms 0.22% 72.84% 181ms 1.23% AbstractCardiacCell::SetVoltage (partial-inline) 0 0% 72.84% 180ms 1.22% KSP_PCApply 149ms 1.01% 73.85% 176ms 1.19% AbstractOneStepIvpOdeSolver::Solve 15ms 0.1% 73.95% 171ms 1.16% ompi_datatype_create 92ms 0.62% 74.58% 168ms 1.14% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 127ms 0.86% 75.44% 164ms 1.11% _int_malloc 13ms 0.088% 75.53% 163ms 1.11% ompi_datatype_destroy 2ms 0.014% 75.54% 155ms 1.05% MPI_Type_free 33ms 0.22% 75.76% 146ms 0.99% __GI___libc_free 38ms 0.26% 76.02% 140ms 0.95% ompi_datatype_release_args 6ms 0.041% 76.06% 140ms 0.95% ompi_info_register_framework_params 1ms 0.0068% 76.07% 139ms 0.94% Hdf5DataWriter::PutUnlimitedVariable 126ms 0.85% 76.92% 138ms 0.94% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 136ms 0.92% 77.85% 136ms 0.92% ddot_ 124ms 0.84% 78.69% 130ms 0.88% AbstractParameterisedSystem::SetAnyVariable 129ms 0.87% 79.56% 129ms 0.87% TimeStepper::CalculateNextTime 125ms 0.85% 80.41% 125ms 0.85% __memcpy_avx_unaligned_erms 1ms 0.0068% 80.42% 124ms 0.84% PMPI_File_set_view 42ms 0.28% 80.70% 120ms 0.81% std::__cxx11::basic_string::basic_string 1ms 0.0068% 80.71% 117ms 0.79% VecDuplicate 3ms 0.02% 80.73% 116ms 0.79% VecDuplicate_MPI 7ms 0.047% 80.78% 112ms 0.76% H5S_set_version 42ms 0.28% 81.06% 112ms 0.76% _int_free 52ms 0.35% 81.41% 109ms 0.74% H5S_hyper_add_span_element 42ms 0.28% 81.70% 105ms 0.71% H5VM_array_calc 2ms 0.014% 81.71% 102ms 0.69% PMPI_Type_create_resized 101ms 0.68% 82.40% 101ms 0.68% __ieee754_log_fma 1ms 0.0068% 82.40% 100ms 0.68% ompi_datatype_duplicate 5ms 0.034% 82.44% 93ms 0.63% VecNorm 19ms 0.13% 82.57% 92ms 0.62% H5S__hyper_rebuild 88ms 0.6% 83.16% 88ms 0.6% H5VM_chunk_index_scaled 64ms 0.43% 83.60% 83ms 0.56% AbstractParameterisedSystem::GetAnyVariable 83ms 0.56% 84.16% 83ms 0.56% H5VM_array_offset_pre 2ms 0.014% 84.17% 83ms 0.56% VecNorm_Seq 0 0% 84.17% 81ms 0.55% H5Pcreate 30ms 0.2% 84.38% 81ms 0.55% H5S_select_iter_next 81ms 0.55% 84.93% 81ms 0.55% [libm.so.6] 8ms 0.054% 84.98% 80ms 0.54% opal_datatype_create_desc 5ms 0.034% 85.01% 79ms 0.54% H5P_create_id 4ms 0.027% 85.04% 79ms 0.54% MPI_Type_contiguous 2ms 0.014% 85.05% 79ms 0.54% VecTDot 0 0% 85.05% 76ms 0.52% VecTDot_Seq 1ms 0.0068% 85.06% 76ms 0.52% VecXDot_Seq_Private.constprop.0