File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 116252ms, 91.53% of 127011ms total Dropped 1124 nodes (cum <= 635.05ms) flat flat% sum% cum cum% 0 0% 0% 127000ms 100% __libc_start_call_main 0 0% 0% 127000ms 100% __libc_start_main_impl 0 0% 0% 127000ms 100% _start 0 0% 0% 126997ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 126997ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 126997ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 126997ms 100% main 0 0% 0% 126957ms 100% AbstractConvergenceTester::Converge 0 0% 0% 126957ms 100% CxxTest::RealTestDescription::run 0 0% 0% 126957ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 126957ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 126957ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 126957ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 3ms 0.0024% 0.0024% 125761ms 99.02% AbstractCardiacProblem::Solve 13ms 0.01% 0.013% 124969ms 98.39% AbstractDynamicLinearPdeSolver::Solve 5ms 0.0039% 0.017% 68460ms 53.90% LinearSystem::Solve 1ms 0.00079% 0.017% 67953ms 53.50% KSPSolve 8ms 0.0063% 0.024% 67952ms 53.50% KSPSolve_Private 16ms 0.013% 0.036% 67612ms 53.23% KSPSolve_SYMMLQ 502ms 0.4% 0.43% 47269ms 37.22% AbstractCardiacTissue::SolveCellSystems 9ms 0.0071% 0.44% 39220ms 30.88% PCApply 3ms 0.0024% 0.44% 39195ms 30.86% PCApply_BJacobi_Singleblock 1003ms 0.79% 1.23% 36951ms 29.09% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 2ms 0.0016% 1.23% 36816ms 28.99% KSPSolve_PREONLY (partial-inline) 2ms 0.0016% 1.23% 35697ms 28.11% PCApply_ICC 9ms 0.0071% 1.24% 35695ms 28.10% MatSolve 35234ms 27.74% 28.98% 35686ms 28.10% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1ms 0.00079% 28.98% 33736ms 26.56% KSP_PCApply.lto_priv.18 7811ms 6.15% 35.13% 32647ms 25.70% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 6ms 0.0047% 35.14% 23145ms 18.22% MatMult 251ms 0.2% 35.33% 23139ms 18.22% MatMult_SeqAIJ (partial-inline) 22640ms 17.83% 53.16% 23138ms 18.22% MatMult_SeqAIJ_Inode (inline) 2284ms 1.80% 54.96% 16955ms 13.35% CardiacNewtonSolver::Solve 5663ms 4.46% 59.42% 10055ms 7.92% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1617ms 1.27% 60.69% 9609ms 7.57% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 234ms 0.18% 60.87% 8932ms 7.03% AbstractCardiacTissue::UpdateCaches (inline) 1662ms 1.31% 62.18% 8324ms 6.55% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1221ms 0.96% 63.14% 8100ms 6.38% BidomainSolver::SetupLinearSystem 7701ms 6.06% 69.21% 7701ms 6.06% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 2ms 0.0016% 69.21% 7351ms 5.79% KSP_PCApply (partial-inline) 9ms 0.0071% 69.22% 6839ms 5.38% KSPConvergedDefault 4061ms 3.20% 72.41% 4167ms 3.28% __ieee754_log_fma 0 0% 72.41% 4097ms 3.23% boost::numeric::ublas::norm_inf (inline) 2829ms 2.23% 74.64% 4097ms 3.23% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 74.64% 4097ms 3.23% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 74.64% 4097ms 3.23% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 7ms 0.0055% 74.65% 3306ms 2.60% MatNullSpaceRemove 3250ms 2.56% 77.21% 3250ms 2.56% ddot_ 33ms 0.026% 77.23% 3153ms 2.48% std::pow (inline) 432ms 0.34% 77.57% 3103ms 2.44% __pow 2021ms 1.59% 79.16% 3092ms 2.43% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 2724ms 2.14% 81.31% 2724ms 2.14% __memcpy_avx_unaligned_erms 0 0% 81.31% 2690ms 2.12% PetscMemcpy (inline) 3ms 0.0024% 81.31% 2647ms 2.08% VecDot 0 0% 81.31% 2644ms 2.08% VecDot_Seq 2ms 0.0016% 81.31% 2644ms 2.08% VecXDot_Seq_Private.constprop.0 357ms 0.28% 81.59% 2639ms 2.08% __ieee754_pow_fma 16ms 0.013% 81.60% 2260ms 1.78% VecCopy 0 0% 81.60% 2242ms 1.77% VecCopy_Seq (partial-inline) 18ms 0.014% 81.62% 2128ms 1.68% VecAXPY 6ms 0.0047% 81.62% 2110ms 1.66% VecAXPY_Seq 2090ms 1.65% 83.27% 2090ms 1.65% daxpy_ 3ms 0.0024% 83.27% 2087ms 1.64% VecMDot 9ms 0.0071% 83.28% 2084ms 1.64% VecMXDot_Private 2063ms 1.62% 84.90% 2071ms 1.63% VecMDot_Seq 2ms 0.0016% 84.90% 1988ms 1.57% AbstractFeVolumeIntegralAssembler::DoAssemble 23ms 0.018% 84.92% 1656ms 1.30% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1529ms 1.20% 86.13% 1584ms 1.25% exp_inline (inline) 0 0% 86.13% 1378ms 1.08% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 86.13% 1263ms 0.99% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 86.13% 1263ms 0.99% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 86.13% 1263ms 0.99% boost_numeric_ublas_abs (inline) 1263ms 0.99% 87.12% 1263ms 0.99% std::abs (inline) 16ms 0.013% 87.13% 1212ms 0.95% VecMAXPY 1194ms 0.94% 88.07% 1196ms 0.94% VecMAXPY_Seq 6ms 0.0047% 88.08% 1099ms 0.87% boost::numeric::ublas::matrix_assign (inline) 237ms 0.19% 88.26% 1085ms 0.85% boost::numeric::ublas::indexing_matrix_assign 741ms 0.58% 88.85% 1041ms 0.82% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 0 0% 88.85% 1030ms 0.81% CuboidMeshConstructor::Construct 0 0% 88.85% 1029ms 0.81% AbstractTetrahedralMesh::ConstructRegularSlabMesh 3ms 0.0024% 88.85% 1029ms 0.81% DistributedTetrahedralMesh::ConstructCuboid 948ms 0.75% 89.60% 948ms 0.75% [libchaste_heart.so] 2ms 0.0016% 89.60% 924ms 0.73% Element::Element 7ms 0.0055% 89.60% 915ms 0.72% VecNorm 6ms 0.0047% 89.61% 904ms 0.71% AbstractTetrahedralElement::CalculateJacobian 1ms 0.00079% 89.61% 900ms 0.71% VecNorm_Seq 4ms 0.0031% 89.61% 864ms 0.68% BidomainAssembler::ComputeMatrixTerm 3ms 0.0024% 89.62% 855ms 0.67% AbstractTetrahedralElement::AbstractTetrahedralElement 16ms 0.013% 89.63% 837ms 0.66% boost::numeric::ublas::c_matrix::c_matrix (inline) 10ms 0.0079% 89.64% 820ms 0.65% VecScale 4ms 0.0031% 89.64% 810ms 0.64% VecScale_Seq 805ms 0.63% 90.27% 805ms 0.63% dscal_ 1ms 0.00079% 90.27% 777ms 0.61% AbstractBidomainSolver::FinaliseLinearSystem 231ms 0.18% 90.46% 774ms 0.61% AbstractBidomainSolver::CheckCompatibilityCondition 0 0% 90.46% 733ms 0.58% BidomainProblem::WriteOneStep 713ms 0.56% 91.02% 713ms 0.56% __memset_avx2_unaligned_erms 0 0% 91.02% 706ms 0.56% PetscMemzero (inline) 0 0% 91.02% 670ms 0.53% VecDuplicate 651ms 0.51% 91.53% 651ms 0.51% log_inline (inline)