File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 433ms, 88.37% of 490ms total Dropped 216 nodes (cum <= 2.45ms) flat flat% sum% cum cum% 0 0% 0% 481ms 98.16% __libc_start_call_main 0 0% 0% 481ms 98.16% __libc_start_main_impl 0 0% 0% 481ms 98.16% _start 0 0% 0% 477ms 97.35% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 477ms 97.35% CxxTest::TestRunner::runAllTests 0 0% 0% 477ms 97.35% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 477ms 97.35% main 0 0% 0% 433ms 88.37% CxxTest::RealTestDescription::run 0 0% 0% 433ms 88.37% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 433ms 88.37% CxxTest::TestRunner::runTest (inline) 0 0% 0% 433ms 88.37% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 433ms 88.37% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 428ms 87.35% AbstractCardiacProblem::Solve 0 0% 0% 427ms 87.14% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 387ms 78.98% LinearSystem::Solve 0 0% 0% 385ms 78.57% KSPSolve 0 0% 0% 385ms 78.57% KSPSolve_CG 0 0% 0% 385ms 78.57% KSPSolve_Private 1ms 0.2% 0.2% 232ms 47.35% KSP_PCApply.lto_priv.7 1ms 0.2% 0.41% 221ms 45.10% PCApply 0 0% 0.41% 220ms 44.90% PCApply_BJacobi_Singleblock 0 0% 0.41% 187ms 38.16% KSPSolve_PREONLY (partial-inline) 0 0% 0.41% 174ms 35.51% MatSolve 169ms 34.49% 34.90% 174ms 35.51% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 34.90% 174ms 35.51% PCApply_ICC 0 0% 34.90% 79ms 16.12% MatMult 1ms 0.2% 35.10% 79ms 16.12% MatMult_SeqAIJ (partial-inline) 78ms 15.92% 51.02% 79ms 16.12% MatMult_SeqAIJ_Inode (inline) 50ms 10.20% 61.22% 50ms 10.20% ddot_ 0 0% 61.22% 40ms 8.16% CxxTest::RealWorldDescription::setUp 0 0% 61.22% 40ms 8.16% PetscSetup::setUpWorld 0 0% 61.22% 40ms 8.16% PetscSetupUtils::CommonSetup 1ms 0.2% 61.43% 39ms 7.96% MatNullSpaceRemove 0 0% 61.43% 39ms 7.96% PMPI_Init_thread 0 0% 61.43% 39ms 7.96% PetscInitialize 0 0% 61.43% 39ms 7.96% PetscSetupUtils::InitialisePetsc 0 0% 61.43% 39ms 7.96% ompi_mpi_init 0 0% 61.43% 34ms 6.94% AbstractCardiacTissue::SolveCellSystems 3ms 0.61% 62.04% 32ms 6.53% 0 0% 62.04% 30ms 6.12% VecMDot 30ms 6.12% 68.16% 30ms 6.12% VecMDot_Seq 0 0% 68.16% 30ms 6.12% VecMXDot_Private 0 0% 68.16% 30ms 6.12% VecTDot 0 0% 68.16% 30ms 6.12% VecTDot_Seq 0 0% 68.16% 30ms 6.12% VecXDot_Seq_Private.constprop.0 0 0% 68.16% 23ms 4.69% orte_init 0 0% 68.16% 21ms 4.29% VecNorm 0 0% 68.16% 20ms 4.08% VecNorm_Seq 2ms 0.41% 68.57% 17ms 3.47% AbstractCardiacTissue::UpdateCaches (inline) 0 0% 68.57% 16ms 3.27% mca_base_framework_open 1ms 0.2% 68.78% 16ms 3.27% opal_stackframe_output 8ms 1.63% 70.41% 15ms 3.06% CellLuoRudy1991FromCellML::GetIIonic 0 0% 70.41% 15ms 3.06% KSP_PCApply (partial-inline) 0 0% 70.41% 15ms 3.06% mca_base_framework_register 0 0% 70.41% 14ms 2.86% __GI__dl_catch_exception 0 0% 70.41% 14ms 2.86% _dl_catch_error 0 0% 70.41% 14ms 2.86% _dlerror_run 0 0% 70.41% 14ms 2.86% hwloc_topology_load 0 0% 70.41% 14ms 2.86% mca_base_framework_components_register 0 0% 70.41% 13ms 2.65% _dl_init 0 0% 70.41% 13ms 2.65% call_init (inline) 0 0% 70.41% 13ms 2.65% mca_base_component_find 0 0% 70.41% 13ms 2.65% mca_base_component_repository_open 0 0% 70.41% 12ms 2.45% KSP_RemoveNullSpace (inline) 0 0% 70.41% 12ms 2.45% VecAYPX 12ms 2.45% 72.86% 12ms 2.45% VecAYPX_Seq 0 0% 72.86% 12ms 2.45% ___dlopen 0 0% 72.86% 12ms 2.45% _dl_open 0 0% 72.86% 12ms 2.45% dl_open_worker 0 0% 72.86% 12ms 2.45% dlopen_doit 0 0% 72.86% 12ms 2.45% dlopen_implementation (inline) 0 0% 72.86% 12ms 2.45% hwloc_linux_get_tid_last_cpu_location 0 0% 72.86% 11ms 2.24% AbstractCardiacCell::ComputeExceptVoltage 0 0% 72.86% 10ms 2.04% VecAXPY 0 0% 72.86% 10ms 2.04% VecAXPY_Seq 10ms 2.04% 74.90% 10ms 2.04% daxpy_ 0 0% 74.90% 9ms 1.84% VecDuplicate 1ms 0.2% 75.10% 9ms 1.84% _dl_runtime_resolve_xsavec 0 0% 75.10% 9ms 1.84% _dl_start_user 0 0% 75.10% 8ms 1.63% VecDuplicate_Seq 0 0% 75.10% 8ms 1.63% VecMAXPY 8ms 1.63% 76.73% 8ms 1.63% VecMAXPY_Seq 4ms 0.82% 77.55% 8ms 1.63% _dl_fixup 0 0% 77.55% 8ms 1.63% dl_open_worker_begin 0 0% 77.55% 7ms 1.43% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 77.55% 7ms 1.43% PetscMemcpy (inline) 7ms 1.43% 78.98% 7ms 1.43% __memcpy_avx_unaligned_erms 0 0% 78.98% 7ms 1.43% mca_base_framework_components_open 0 0% 78.98% 7ms 1.43% mca_topo_base_dist_graph_neighbors_count 0 0% 78.98% 7ms 1.43% orte_ess_base_proc_binding 0 0% 78.98% 6ms 1.22% PetscMemzero (inline) 6ms 1.22% 80.20% 6ms 1.22% __memset_avx2_unaligned_erms 1ms 0.2% 80.41% 6ms 1.22% _dl_map_object 0 0% 80.41% 6ms 1.22% opal_hwloc_base_get_topology 0 0% 80.41% 5ms 1.02% BidomainSolver::SetupLinearSystem 0 0% 80.41% 5ms 1.02% VecSetType 0 0% 80.41% 5ms 1.02% _dl_lookup_symbol_x 2ms 0.41% 80.82% 5ms 1.02% boost::serialization::singleton::get_instance 5ms 1.02% 81.84% 5ms 1.02% do_lookup_x 0 0% 81.84% 4ms 0.82% AbstractCardiacProblem::Initialise 3ms 0.61% 82.45% 4ms 0.82% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 1ms 0.2% 82.65% 4ms 0.82% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 82.65% 4ms 0.82% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 82.65% 4ms 0.82% CxxTest::RealWorldDescription::tearDown 0 0% 82.65% 4ms 0.82% EulerIvpOdeSolver::CalculateNextYValue 0 0% 82.65% 4ms 0.82% PetscFinalize 2ms 0.41% 83.06% 4ms 0.82% PetscFreeAlign 1ms 0.2% 83.27% 4ms 0.82% PetscMallocA 0 0% 83.27% 4ms 0.82% PetscSetup::tearDownWorld 0 0% 83.27% 4ms 0.82% PetscSetupUtils::CommonFinalize 0 0% 83.27% 4ms 0.82% VecSet 0 0% 83.27% 4ms 0.82% VecSet_Seq (partial-inline) 3ms 0.61% 83.88% 4ms 0.82% __GI___exp 4ms 0.82% 84.69% 4ms 0.82% __GI___libc_read 0 0% 84.69% 4ms 0.82% __GI_exit 1ms 0.2% 84.90% 4ms 0.82% __cxa_finalize 0 0% 84.90% 4ms 0.82% __ieee754_pow_fma 0 0% 84.90% 4ms 0.82% __pow 0 0% 84.90% 4ms 0.82% __run_exit_handlers 0 0% 84.90% 4ms 0.82% _dl_call_fini 0 0% 84.90% 4ms 0.82% _dl_fini 0 0% 84.90% 4ms 0.82% ompi_mpi_finalize 0 0% 84.90% 4ms 0.82% std::pow (inline) 0 0% 84.90% 3ms 0.61% AbstractFeVolumeIntegralAssembler::DoAssemble 0 0% 84.90% 3ms 0.61% DistributedTetrahedralMesh::ConstructFromMeshReader 1ms 0.2% 85.10% 3ms 0.61% PetscHeaderCreate_Private 0 0% 85.10% 3ms 0.61% PetscMallocAlign (partial-inline) 0 0% 85.10% 3ms 0.61% VecCreate 0 0% 85.10% 3ms 0.61% VecDestroy 0 0% 85.10% 3ms 0.61% _GLOBAL__sub_I_ChasteParameters_3_4.cpp 3ms 0.61% 85.71% 3ms 0.61% __GI___clock_nanosleep 3ms 0.61% 86.33% 3ms 0.61% __GI___fstatat64 3ms 0.61% 86.94% 3ms 0.61% __GI___libc_free 1ms 0.2% 87.14% 3ms 0.61% __GI___libc_malloc 0 0% 87.14% 3ms 0.61% __GI___nanosleep 0 0% 87.14% 3ms 0.61% _dl_map_object_deps 2ms 0.41% 87.55% 3ms 0.61% _int_malloc 0 0% 87.55% 3ms 0.61% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 1ms 0.2% 87.76% 3ms 0.61% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 3ms 0.61% 88.37% 3ms 0.61% exp_inline (inline) 0 0% 88.37% 3ms 0.61% openaux 0 0% 88.37% 3ms 0.61% usleep