File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 121130ms, 90.99% of 133120ms total Dropped 1190 nodes (cum <= 665.60ms) flat flat% sum% cum cum% 0 0% 0% 133106ms 100% __libc_start_call_main 0 0% 0% 133106ms 100% __libc_start_main_impl 0 0% 0% 133106ms 100% _start 0 0% 0% 133103ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 133103ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 133103ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 133103ms 100% main 0 0% 0% 133064ms 100% CxxTest::RealTestDescription::run 0 0% 0% 133064ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 133064ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 133064ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 133064ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 0 0% 0% 133063ms 100% AbstractConvergenceTester::Converge 3ms 0.0023% 0.0023% 131856ms 99.05% AbstractCardiacProblem::Solve 13ms 0.0098% 0.012% 130945ms 98.37% AbstractDynamicLinearPdeSolver::Solve 3ms 0.0023% 0.014% 73115ms 54.92% LinearSystem::Solve 3ms 0.0023% 0.017% 72536ms 54.49% KSPSolve 16ms 0.012% 0.029% 72533ms 54.49% KSPSolve_Private 18ms 0.014% 0.042% 72133ms 54.19% KSPSolve_SYMMLQ 511ms 0.38% 0.43% 47780ms 35.89% AbstractCardiacTissue::SolveCellSystems 5ms 0.0038% 0.43% 39999ms 30.05% PCApply 3ms 0.0023% 0.43% 39980ms 30.03% PCApply_BJacobi_Singleblock 1ms 0.00075% 0.43% 37468ms 28.15% KSPSolve_PREONLY (partial-inline) 954ms 0.72% 1.15% 37269ms 28.00% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 5ms 0.0038% 1.15% 36483ms 27.41% PCApply_ICC 3ms 0.0023% 1.16% 36478ms 27.40% MatSolve 36073ms 27.10% 28.25% 36475ms 27.40% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 2ms 0.0015% 28.25% 34256ms 25.73% KSP_PCApply.lto_priv.18 7896ms 5.93% 34.19% 32949ms 24.75% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 18ms 0.014% 34.20% 26181ms 19.67% MatMult 280ms 0.21% 34.41% 26163ms 19.65% MatMult_SeqAIJ (partial-inline) 25665ms 19.28% 53.69% 26162ms 19.65% MatMult_SeqAIJ_Inode (inline) 2322ms 1.74% 55.43% 17041ms 12.80% CardiacNewtonSolver::Solve 5654ms 4.25% 59.68% 10171ms 7.64% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1535ms 1.15% 60.83% 9494ms 7.13% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 223ms 0.17% 61.00% 8898ms 6.68% AbstractCardiacTissue::UpdateCaches (inline) 1153ms 0.87% 61.87% 8791ms 6.60% BidomainSolver::SetupLinearSystem 1755ms 1.32% 63.19% 8287ms 6.23% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 7656ms 5.75% 68.94% 7656ms 5.75% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 2ms 0.0015% 68.94% 7440ms 5.59% KSP_PCApply (partial-inline) 5ms 0.0038% 68.94% 7024ms 5.28% KSPConvergedDefault 4213ms 3.16% 72.11% 4305ms 3.23% __ieee754_log_fma 0 0% 72.11% 4097ms 3.08% boost::numeric::ublas::norm_inf (inline) 2827ms 2.12% 74.23% 4097ms 3.08% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 74.23% 4097ms 3.08% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 74.23% 4097ms 3.08% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 3348ms 2.52% 76.75% 3348ms 2.52% ddot_ 2066ms 1.55% 78.30% 3176ms 2.39% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 3167ms 2.38% 80.68% 3167ms 2.38% __memcpy_avx_unaligned_erms 9ms 0.0068% 80.68% 3126ms 2.35% MatNullSpaceRemove 0 0% 80.68% 3110ms 2.34% PetscMemcpy (inline) 32ms 0.024% 80.71% 3048ms 2.29% std::pow (inline) 402ms 0.3% 81.01% 3003ms 2.26% __pow 13ms 0.0098% 81.02% 2796ms 2.10% VecDot 2ms 0.0015% 81.02% 2783ms 2.09% VecDot_Seq 0 0% 81.02% 2781ms 2.09% VecXDot_Seq_Private.constprop.0 19ms 0.014% 81.04% 2745ms 2.06% VecCopy 6ms 0.0045% 81.04% 2723ms 2.05% VecCopy_Seq (partial-inline) 18ms 0.014% 81.05% 2703ms 2.03% VecAXPY 7ms 0.0053% 81.06% 2685ms 2.02% VecAXPY_Seq 2663ms 2.00% 83.06% 2663ms 2.00% daxpy_ 371ms 0.28% 83.34% 2570ms 1.93% __ieee754_pow_fma 0 0% 83.34% 2179ms 1.64% AbstractFeVolumeIntegralAssembler::DoAssemble 5ms 0.0038% 83.34% 2007ms 1.51% VecMDot 9ms 0.0068% 83.35% 2002ms 1.50% VecMXDot_Private 1982ms 1.49% 84.84% 1991ms 1.50% VecMDot_Seq 30ms 0.023% 84.86% 1645ms 1.24% AbstractFeVolumeIntegralAssembler::AssembleOnElement 0 0% 84.86% 1564ms 1.17% AbstractFeAssemblerInterface::AssembleMatrix (inline) 1478ms 1.11% 85.97% 1526ms 1.15% exp_inline (inline) 0 0% 85.97% 1264ms 0.95% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 85.97% 1264ms 0.95% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 85.97% 1264ms 0.95% boost_numeric_ublas_abs (inline) 1264ms 0.95% 86.92% 1264ms 0.95% std::abs (inline) 10ms 0.0075% 86.93% 1110ms 0.83% VecMAXPY 729ms 0.55% 87.48% 1103ms 0.83% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 1099ms 0.83% 88.30% 1100ms 0.83% VecMAXPY_Seq 7ms 0.0053% 88.31% 1081ms 0.81% boost::numeric::ublas::matrix_assign (inline) 230ms 0.17% 88.48% 1068ms 0.8% boost::numeric::ublas::indexing_matrix_assign 0 0% 88.48% 1017ms 0.76% CuboidMeshConstructor::Construct 0 0% 88.48% 1016ms 0.76% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 88.48% 1016ms 0.76% DistributedTetrahedralMesh::ConstructCuboid 993ms 0.75% 89.22% 993ms 0.75% [libchaste_heart.so] 961ms 0.72% 89.95% 961ms 0.72% __memset_avx2_unaligned_erms 0 0% 89.95% 947ms 0.71% PetscMemzero (inline) 9ms 0.0068% 89.95% 937ms 0.7% VecScale 6ms 0.0045% 89.96% 928ms 0.7% VecScale_Seq 916ms 0.69% 90.65% 916ms 0.69% dscal_ 3ms 0.0023% 90.65% 909ms 0.68% Element::Element 5ms 0.0038% 90.65% 888ms 0.67% AbstractTetrahedralElement::CalculateJacobian 4ms 0.003% 90.66% 887ms 0.67% VecNorm 4ms 0.003% 90.66% 875ms 0.66% VecNorm_Seq 1ms 0.00075% 90.66% 872ms 0.66% AbstractBidomainSolver::FinaliseLinearSystem 265ms 0.2% 90.86% 869ms 0.65% AbstractBidomainSolver::CheckCompatibilityCondition 4ms 0.003% 90.86% 869ms 0.65% BidomainAssembler::ComputeMatrixTerm 2ms 0.0015% 90.86% 842ms 0.63% AbstractTetrahedralElement::AbstractTetrahedralElement 2ms 0.0015% 90.86% 837ms 0.63% BidomainProblem::WriteOneStep 2ms 0.0015% 90.87% 831ms 0.62% VecDuplicate 8ms 0.006% 90.87% 831ms 0.62% boost::numeric::ublas::c_matrix::c_matrix (inline) 162ms 0.12% 90.99% 692ms 0.52% AbstractCardiacCell::SetVoltage