File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12704ms, 85.27% of 14899ms total Dropped 800 nodes (cum <= 74.50ms) flat flat% sum% cum cum% 0 0% 0% 14889ms 99.93% __libc_start_call_main 0 0% 0% 14889ms 99.93% __libc_start_main_impl 0 0% 0% 14889ms 99.93% _start 0 0% 0% 14886ms 99.91% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14886ms 99.91% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14886ms 99.91% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14886ms 99.91% main 0 0% 0% 14838ms 99.59% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14838ms 99.59% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14838ms 99.59% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 6ms 0.04% 0.04% 14815ms 99.44% AbstractCardiacProblem::Solve 2ms 0.013% 0.054% 11372ms 76.33% AbstractDynamicLinearPdeSolver::Solve 82ms 0.55% 0.6% 9042ms 60.69% AbstractCardiacTissue::SolveCellSystems 96ms 0.64% 1.25% 5461ms 36.65% AbstractCardiacCell::ComputeExceptVoltage 114ms 0.77% 2.01% 4810ms 32.28% AbstractOneStepIvpOdeSolver::InternalSolve 163ms 1.09% 3.11% 4084ms 27.41% EulerIvpOdeSolver::CalculateNextYValue 904ms 6.07% 9.18% 3876ms 26.02% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1816ms 12.19% 21.36% 3509ms 23.55% __GI___exp 1ms 0.0067% 21.37% 3368ms 22.61% MonodomainProblem::WriteOneStep 1ms 0.0067% 21.38% 3217ms 21.59% H5Dwrite 2ms 0.013% 21.39% 3198ms 21.46% Hdf5DataWriter::PutVector 2ms 0.013% 21.40% 3187ms 21.39% H5D__write 101ms 0.68% 22.08% 2901ms 19.47% AbstractCardiacTissue::UpdateCaches (inline) 829ms 5.56% 27.65% 2716ms 18.23% CellLuoRudy1991FromCellML::GetIIonic 0 0% 27.65% 1924ms 12.91% H5D__chunk_collective_write 16ms 0.11% 27.75% 1924ms 12.91% H5F_set_coll_metadata_reads 19ms 0.13% 27.88% 1755ms 11.78% H5FD_s3comms_uriencode 1294ms 8.69% 36.57% 1628ms 10.93% __ieee754_exp_fma 0 0% 36.57% 1586ms 10.65% LinearSystem::Solve 0 0% 36.57% 1460ms 9.80% KSPSolve 2ms 0.013% 36.58% 1460ms 9.80% KSPSolve_Private 6ms 0.04% 36.62% 1443ms 9.69% KSPSolve_CG 48ms 0.32% 36.94% 1373ms 9.22% 3ms 0.02% 36.96% 1367ms 9.18% H5F_block_write 3ms 0.02% 36.98% 1364ms 9.15% H5PB_write 1ms 0.0067% 36.99% 1361ms 9.13% H5FD_write 0 0% 36.99% 1361ms 9.13% H5F__accum_write 1ms 0.0067% 37.00% 1258ms 8.44% H5D__mpio_select_write 0 0% 37.00% 1148ms 7.71% PMPI_File_write_at_all 1124ms 7.54% 44.54% 1128ms 7.57% __GI_pwritev64 9ms 0.06% 44.60% 1124ms 7.54% H5D__chunk_cacheable 3ms 0.02% 44.62% 1023ms 6.87% std::pow (inline) 101ms 0.68% 45.30% 1016ms 6.82% __pow 318ms 2.13% 47.43% 981ms 6.58% H5S_select_iterate 97ms 0.65% 48.08% 914ms 6.13% __ieee754_pow_fma 3ms 0.02% 48.10% 802ms 5.38% PCApply 0 0% 48.10% 794ms 5.33% PCApply_BJacobi_Singleblock 1ms 0.0067% 48.11% 766ms 5.14% KSPSolve_PREONLY 1ms 0.0067% 48.12% 760ms 5.10% MatSolve 0 0% 48.12% 760ms 5.10% PCApply_ICC 748ms 5.02% 53.14% 759ms 5.09% MatSolve_SeqSBAIJ_1_NaturalOrdering 329ms 2.21% 55.35% 722ms 4.85% MonodomainSolver::SetupLinearSystem 87ms 0.58% 55.93% 676ms 4.54% H5D__chunk_set_sizes 0 0% 55.93% 601ms 4.03% KSP_PCApply.lto_priv.7 2ms 0.013% 55.94% 584ms 3.92% MatMult 579ms 3.89% 59.83% 582ms 3.91% MatMult_SeqAIJ 66ms 0.44% 60.27% 493ms 3.31% H5S_mpio_space_type 437ms 2.93% 63.21% 437ms 2.93% log_inline (inline) 218ms 1.46% 64.67% 404ms 2.71% CellLuoRudy1991FromCellML::VerifyStateVariables 328ms 2.20% 66.87% 341ms 2.29% exp_inline (inline) 217ms 1.46% 68.33% 271ms 1.82% top12 (inline) 116ms 0.78% 69.11% 266ms 1.79% TimeStepper::TimeStepper 2ms 0.013% 69.12% 254ms 1.70% KSPConvergedDefault 233ms 1.56% 70.68% 233ms 1.56% [libchaste_heart.so] 50ms 0.34% 71.02% 213ms 1.43% AbstractCardiacCell::SetVoltage (partial-inline) 9ms 0.06% 71.08% 210ms 1.41% H5VM_chunk_index 0 0% 71.08% 207ms 1.39% KSP_PCApply 37ms 0.25% 71.33% 198ms 1.33% __GI___libc_malloc 159ms 1.07% 72.39% 192ms 1.29% _int_malloc 174ms 1.17% 73.56% 174ms 1.17% ddot_ 1ms 0.0067% 73.57% 169ms 1.13% Hdf5DataWriter::PutUnlimitedVariable 169ms 1.13% 74.70% 169ms 1.13% asuint64 (inline) 9ms 0.06% 74.76% 168ms 1.13% ompi_datatype_create 153ms 1.03% 75.79% 153ms 1.03% TimeStepper::CalculateNextTime 34ms 0.23% 76.02% 147ms 0.99% H5S_set_version 12ms 0.081% 76.10% 143ms 0.96% MPI_Type_free 100ms 0.67% 76.77% 141ms 0.95% AbstractOneStepIvpOdeSolver::Solve 11ms 0.074% 76.84% 141ms 0.95% ompi_datatype_destroy 16ms 0.11% 76.95% 139ms 0.93% __GI___libc_free 118ms 0.79% 77.74% 138ms 0.93% AbstractParameterisedSystem::SetAnyVariable 113ms 0.76% 78.50% 133ms 0.89% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 130ms 0.87% 79.37% 130ms 0.87% __ieee754_log_fma 61ms 0.41% 79.78% 129ms 0.87% H5S_hyper_add_span_element 129ms 0.87% 80.65% 129ms 0.87% __memcpy_avx_unaligned_erms 56ms 0.38% 81.03% 125ms 0.84% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 1ms 0.0067% 81.03% 125ms 0.84% PMPI_File_set_view 33ms 0.22% 81.25% 123ms 0.83% _int_free 2ms 0.013% 81.27% 122ms 0.82% VecNorm 8ms 0.054% 81.32% 116ms 0.78% ompi_info_register_framework_params 32ms 0.21% 81.54% 114ms 0.77% ompi_datatype_release_args 51ms 0.34% 81.88% 113ms 0.76% H5VM_array_calc 4ms 0.027% 81.90% 113ms 0.76% VecNorm_Seq 106ms 0.71% 82.62% 106ms 0.71% H5VM_chunk_index_scaled 1ms 0.0067% 82.62% 102ms 0.68% VecTDot 0 0% 82.62% 101ms 0.68% VecTDot_Seq 1ms 0.0067% 82.63% 101ms 0.68% VecXDot_Seq_Private.constprop.0 98ms 0.66% 83.29% 98ms 0.66% H5VM_array_offset_pre 1ms 0.0067% 83.29% 98ms 0.66% PMPI_Type_create_resized 79ms 0.53% 83.82% 97ms 0.65% AbstractParameterisedSystem::GetAnyVariable 56ms 0.38% 84.20% 95ms 0.64% TimeStepper::AdvanceOneTimeStep 4ms 0.027% 84.23% 90ms 0.6% H5D__chunk_allocated 2ms 0.013% 84.24% 90ms 0.6% ompi_datatype_duplicate 0 0% 84.24% 89ms 0.6% VecDuplicate 3ms 0.02% 84.26% 89ms 0.6% VecDuplicate_MPI 0 0% 84.26% 85ms 0.57% std::vector::_M_assign_aux (inline) 0 0% 84.26% 85ms 0.57% std::vector::assign (inline) 0 0% 84.26% 83ms 0.56% H5D__select_write 0 0% 84.26% 83ms 0.56% H5Dgather 3ms 0.02% 84.28% 82ms 0.55% H5D__contig_fill 30ms 0.2% 84.48% 81ms 0.54% __libc_calloc 80ms 0.54% 85.02% 80ms 0.54% TimeStepper::GetNextTimeStep 0 0% 85.02% 79ms 0.53% H5D__contig_write 0 0% 85.02% 79ms 0.53% H5VM_opvv 24ms 0.16% 85.18% 78ms 0.52% ompi_datatype_set_args 6ms 0.04% 85.22% 77ms 0.52% MPI_Type_create_hindexed 7ms 0.047% 85.27% 75ms 0.5% std::__copy_move::__copy_m (inline) 0 0% 85.27% 75ms 0.5% std::__copy_move_a (inline) 0 0% 85.27% 75ms 0.5% std::__copy_move_a1 (inline) 0 0% 85.27% 75ms 0.5% std::__copy_move_a2 (inline) 0 0% 85.27% 75ms 0.5% std::copy (inline)