File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 419ms, 87.11% of 481ms total Dropped 209 nodes (cum <= 2.40ms) flat flat% sum% cum cum% 0 0% 0% 470ms 97.71% __libc_start_call_main 0 0% 0% 470ms 97.71% __libc_start_main_impl 0 0% 0% 470ms 97.71% _start 0 0% 0% 467ms 97.09% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 467ms 97.09% CxxTest::TestRunner::runAllTests 0 0% 0% 467ms 97.09% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 467ms 97.09% main 0 0% 0% 430ms 89.40% CxxTest::RealTestDescription::run 0 0% 0% 430ms 89.40% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 430ms 89.40% CxxTest::TestRunner::runTest (inline) 0 0% 0% 430ms 89.40% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 430ms 89.40% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 426ms 88.57% AbstractCardiacProblem::Solve 0 0% 0% 424ms 88.15% AbstractDynamicLinearPdeSolver::Solve 1ms 0.21% 0.21% 385ms 80.04% LinearSystem::Solve 0 0% 0.21% 383ms 79.63% KSPSolve 0 0% 0.21% 383ms 79.63% KSPSolve_CG 0 0% 0.21% 383ms 79.63% KSPSolve_Private 0 0% 0.21% 224ms 46.57% KSP_PCApply.lto_priv.7 0 0% 0.21% 210ms 43.66% PCApply 0 0% 0.21% 210ms 43.66% PCApply_BJacobi_Singleblock 0 0% 0.21% 178ms 37.01% KSPSolve_PREONLY (partial-inline) 0 0% 0.21% 160ms 33.26% MatSolve 159ms 33.06% 33.26% 160ms 33.26% MatSolve_SeqSBAIJ_1_NaturalOrdering 0 0% 33.26% 160ms 33.26% PCApply_ICC 0 0% 33.26% 86ms 17.88% MatMult 1ms 0.21% 33.47% 86ms 17.88% MatMult_SeqAIJ (partial-inline) 85ms 17.67% 51.14% 86ms 17.88% MatMult_SeqAIJ_Inode (inline) 55ms 11.43% 62.58% 55ms 11.43% ddot_ 0 0% 62.58% 48ms 9.98% MatNullSpaceRemove 0 0% 62.58% 38ms 7.90% VecTDot 0 0% 62.58% 38ms 7.90% VecTDot_Seq 0 0% 62.58% 38ms 7.90% VecXDot_Seq_Private.constprop.0 0 0% 62.58% 34ms 7.07% AbstractCardiacTissue::SolveCellSystems 0 0% 62.58% 34ms 7.07% CxxTest::RealWorldDescription::setUp 0 0% 62.58% 34ms 7.07% PMPI_Init_thread 0 0% 62.58% 34ms 7.07% PetscInitialize 0 0% 62.58% 34ms 7.07% PetscSetup::setUpWorld 0 0% 62.58% 34ms 7.07% PetscSetupUtils::CommonSetup 0 0% 62.58% 34ms 7.07% PetscSetupUtils::InitialisePetsc 0 0% 62.58% 34ms 7.07% ompi_mpi_init 1ms 0.21% 62.79% 32ms 6.65% 0 0% 62.79% 30ms 6.24% VecMDot 30ms 6.24% 69.02% 30ms 6.24% VecMDot_Seq 0 0% 69.02% 30ms 6.24% VecMXDot_Private 0 0% 69.02% 21ms 4.37% orte_init 0 0% 69.02% 20ms 4.16% AbstractCardiacCell::ComputeExceptVoltage 0 0% 69.02% 19ms 3.95% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 69.02% 19ms 3.95% KSP_PCApply (partial-inline) 8ms 1.66% 70.69% 19ms 3.95% __GI___exp 1ms 0.21% 70.89% 18ms 3.74% VecMAXPY 1ms 0.21% 71.10% 17ms 3.53% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 71.10% 17ms 3.53% EulerIvpOdeSolver::CalculateNextYValue 17ms 3.53% 74.64% 17ms 3.53% VecMAXPY_Seq 0 0% 74.64% 17ms 3.53% VecNorm 0 0% 74.64% 17ms 3.53% VecNorm_Seq 0 0% 74.64% 14ms 2.91% hwloc_topology_load 0 0% 74.64% 13ms 2.70% VecAYPX 13ms 2.70% 77.34% 13ms 2.70% VecAYPX_Seq 0 0% 77.34% 13ms 2.70% __GI__dl_catch_exception 0 0% 77.34% 13ms 2.70% _dl_catch_error 0 0% 77.34% 13ms 2.70% _dlerror_run 1ms 0.21% 77.55% 13ms 2.70% hwloc_linux_get_tid_last_cpu_location 0 0% 77.55% 13ms 2.70% mca_base_framework_open 0 0% 77.55% 12ms 2.49% mca_base_framework_register 0 0% 77.55% 12ms 2.49% opal_stackframe_output 0 0% 77.55% 11ms 2.29% AbstractCardiacTissue::UpdateCaches (inline) 4ms 0.83% 78.38% 11ms 2.29% CellLuoRudy1991FromCellML::GetIIonic 0 0% 78.38% 11ms 2.29% ___dlopen 9ms 1.87% 80.25% 11ms 2.29% __ieee754_exp_fma 0 0% 80.25% 11ms 2.29% _dl_init 0 0% 80.25% 11ms 2.29% _dl_open 0 0% 80.25% 11ms 2.29% call_init (inline) 0 0% 80.25% 11ms 2.29% dl_open_worker 0 0% 80.25% 11ms 2.29% dlopen_doit 0 0% 80.25% 11ms 2.29% dlopen_implementation (inline) 0 0% 80.25% 11ms 2.29% mca_base_framework_components_register 0 0% 80.25% 10ms 2.08% mca_base_component_find 0 0% 80.25% 10ms 2.08% mca_base_component_repository_open 0 0% 80.25% 8ms 1.66% _dl_start_user 0 0% 80.25% 8ms 1.66% dl_open_worker_begin 0 0% 80.25% 6ms 1.25% VecDestroy 0 0% 80.25% 6ms 1.25% mca_base_framework_components_open 0 0% 80.25% 6ms 1.25% mca_topo_base_dist_graph_neighbors_count 0 0% 80.25% 6ms 1.25% opal_hwloc_base_get_topology 0 0% 80.25% 6ms 1.25% orte_ess_base_proc_binding 1ms 0.21% 80.46% 5ms 1.04% BidomainSolver::SetupLinearSystem 0 0% 80.46% 5ms 1.04% VecDuplicate 0 0% 80.46% 5ms 1.04% VecDuplicate_Seq 5ms 1.04% 81.50% 5ms 1.04% __GI___libc_read 0 0% 81.50% 5ms 1.04% _dl_map_object 0 0% 81.50% 4ms 0.83% AbstractCardiacProblem::Initialise 1ms 0.21% 81.70% 4ms 0.83% PetscFreeAlign 1ms 0.21% 81.91% 4ms 0.83% VecAXPY 0 0% 81.91% 4ms 0.83% _dl_map_object_from_fd 1ms 0.21% 82.12% 4ms 0.83% _int_malloc 0 0% 82.12% 4ms 0.83% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 82.12% 4ms 0.83% boost::serialization::singleton::get_instance 0 0% 82.12% 3ms 0.62% CxxTest::RealWorldDescription::tearDown 0 0% 82.12% 3ms 0.62% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 82.12% 3ms 0.62% PetscFinalize 0 0% 82.12% 3ms 0.62% PetscHeaderDestroy_Private 0 0% 82.12% 3ms 0.62% PetscMallocA 0 0% 82.12% 3ms 0.62% PetscMallocAlign (partial-inline) 0 0% 82.12% 3ms 0.62% PetscMemzero (inline) 0 0% 82.12% 3ms 0.62% PetscSetup::tearDownWorld 0 0% 82.12% 3ms 0.62% PetscSetupUtils::CommonFinalize 0 0% 82.12% 3ms 0.62% VecAXPY_Seq 0 0% 82.12% 3ms 0.62% VecCreate 0 0% 82.12% 3ms 0.62% VecCreate_Seq 0 0% 82.12% 3ms 0.62% VecSetType 0 0% 82.12% 3ms 0.62% XOpenDisplay 0 0% 82.12% 3ms 0.62% [hwloc_gl.so] 0 0% 82.12% 3ms 0.62% [libxcb.so.1.1.0] 0 0% 82.12% 3ms 0.62% _XConnectXCB 3ms 0.62% 82.74% 3ms 0.62% __GI___clock_nanosleep 0 0% 82.74% 3ms 0.62% __GI___libc_free 0 0% 82.74% 3ms 0.62% __GI___libc_malloc 0 0% 82.74% 3ms 0.62% __GI___nanosleep 0 0% 82.74% 3ms 0.62% __GI_exit 0 0% 82.74% 3ms 0.62% __cxa_finalize 1ms 0.21% 82.95% 3ms 0.62% __ieee754_pow_fma 3ms 0.62% 83.58% 3ms 0.62% __memcpy_avx_unaligned_erms 3ms 0.62% 84.20% 3ms 0.62% __memset_avx2_unaligned_erms 3ms 0.62% 84.82% 3ms 0.62% __mmap64 0 0% 84.82% 3ms 0.62% __pow 0 0% 84.82% 3ms 0.62% __run_exit_handlers 0 0% 84.82% 3ms 0.62% _dl_call_fini 0 0% 84.82% 3ms 0.62% _dl_fini 0 0% 84.82% 3ms 0.62% _dl_lookup_symbol_x 0 0% 84.82% 3ms 0.62% _dl_map_segments (inline) 0 0% 84.82% 3ms 0.62% _dl_open_relocate_one_object (inline) 0 0% 84.82% 3ms 0.62% _dl_relocate_object 1ms 0.21% 85.03% 3ms 0.62% _dl_runtime_resolve_xsavec 2ms 0.42% 85.45% 3ms 0.62% _int_free 2ms 0.42% 85.86% 3ms 0.62% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 85.86% 3ms 0.62% clone3 3ms 0.62% 86.49% 3ms 0.62% daxpy_ 3ms 0.62% 87.11% 3ms 0.62% do_lookup_x 0 0% 87.11% 3ms 0.62% event_base_loop 0 0% 87.11% 3ms 0.62% ompi_mpi_finalize 0 0% 87.11% 3ms 0.62% start_thread 0 0% 87.11% 3ms 0.62% std::pow (inline) 0 0% 87.11% 3ms 0.62% usleep 0 0% 87.11% 3ms 0.62% xcb_connect_to_display_with_auth_info