File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 117538ms, 91.53% of 128413ms total Dropped 1163 nodes (cum <= 642.07ms) flat flat% sum% cum cum% 0 0% 0% 128400ms 100% __libc_start_call_main 0 0% 0% 128400ms 100% __libc_start_main_impl 0 0% 0% 128400ms 100% _start 0 0% 0% 128397ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 128397ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 128397ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 128397ms 100% main 0 0% 0% 128359ms 100% CxxTest::RealTestDescription::run 0 0% 0% 128359ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 128359ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 128359ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 128359ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 0 0% 0% 128358ms 100% AbstractConvergenceTester::Converge 3ms 0.0023% 0.0023% 127171ms 99.03% AbstractCardiacProblem::Solve 6ms 0.0047% 0.007% 126458ms 98.48% AbstractDynamicLinearPdeSolver::Solve 7ms 0.0055% 0.012% 69844ms 54.39% LinearSystem::Solve 3ms 0.0023% 0.015% 69340ms 54.00% KSPSolve 18ms 0.014% 0.029% 69338ms 54.00% KSPSolve_Private 10ms 0.0078% 0.037% 68962ms 53.70% KSPSolve_SYMMLQ 484ms 0.38% 0.41% 47454ms 36.95% AbstractCardiacTissue::SolveCellSystems 5ms 0.0039% 0.42% 39778ms 30.98% PCApply 9ms 0.007% 0.42% 39757ms 30.96% PCApply_BJacobi_Singleblock 1ms 0.00078% 0.43% 37491ms 29.20% KSPSolve_PREONLY (partial-inline) 1052ms 0.82% 1.24% 37017ms 28.83% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 2ms 0.0016% 1.25% 36294ms 28.26% MatSolve 0 0% 1.25% 36294ms 28.26% PCApply_ICC 35865ms 27.93% 29.18% 36292ms 28.26% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 7ms 0.0055% 29.18% 34278ms 26.69% KSP_PCApply.lto_priv.18 7827ms 6.10% 35.28% 32661ms 25.43% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 14ms 0.011% 35.29% 23170ms 18.04% MatMult 304ms 0.24% 35.52% 23156ms 18.03% MatMult_SeqAIJ (partial-inline) 22626ms 17.62% 53.14% 23152ms 18.03% MatMult_SeqAIJ_Inode (inline) 2308ms 1.80% 54.94% 17096ms 13.31% CardiacNewtonSolver::Solve 5599ms 4.36% 59.30% 10122ms 7.88% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1738ms 1.35% 60.65% 9330ms 7.27% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 207ms 0.16% 60.82% 8947ms 6.97% AbstractCardiacTissue::UpdateCaches (inline) 1785ms 1.39% 62.21% 8359ms 6.51% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1193ms 0.93% 63.13% 7971ms 6.21% BidomainSolver::SetupLinearSystem 0 0% 63.13% 7600ms 5.92% KSP_PCApply (partial-inline) 7321ms 5.70% 68.84% 7321ms 5.70% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 2ms 0.0016% 68.84% 7060ms 5.50% KSPConvergedDefault 4208ms 3.28% 72.11% 4304ms 3.35% __ieee754_log_fma 0 0% 72.11% 4214ms 3.28% boost::numeric::ublas::norm_inf (inline) 2839ms 2.21% 74.33% 4214ms 3.28% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 74.33% 4214ms 3.28% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 74.33% 4214ms 3.28% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 9ms 0.007% 74.33% 3526ms 2.75% MatNullSpaceRemove 3514ms 2.74% 77.07% 3514ms 2.74% ddot_ 27ms 0.021% 77.09% 3109ms 2.42% std::pow (inline) 1998ms 1.56% 78.65% 3091ms 2.41% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 396ms 0.31% 78.95% 3064ms 2.39% __pow 8ms 0.0062% 78.96% 2895ms 2.25% VecDot 1ms 0.00078% 78.96% 2887ms 2.25% VecDot_Seq 1ms 0.00078% 78.96% 2886ms 2.25% VecXDot_Seq_Private.constprop.0 2790ms 2.17% 81.13% 2790ms 2.17% __memcpy_avx_unaligned_erms 0 0% 81.13% 2759ms 2.15% PetscMemcpy (inline) 323ms 0.25% 81.39% 2638ms 2.05% __ieee754_pow_fma 16ms 0.012% 81.40% 2362ms 1.84% VecCopy 1ms 0.00078% 81.40% 2342ms 1.82% VecCopy_Seq (partial-inline) 3ms 0.0023% 81.40% 2199ms 1.71% VecMDot 7ms 0.0055% 81.41% 2196ms 1.71% VecMXDot_Private 2173ms 1.69% 83.10% 2183ms 1.70% VecMDot_Seq 14ms 0.011% 83.11% 2157ms 1.68% VecAXPY 4ms 0.0031% 83.11% 2143ms 1.67% VecAXPY_Seq 2125ms 1.65% 84.77% 2125ms 1.65% daxpy_ 0 0% 84.77% 2020ms 1.57% AbstractFeVolumeIntegralAssembler::DoAssemble 19ms 0.015% 84.78% 1683ms 1.31% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1534ms 1.19% 85.98% 1578ms 1.23% exp_inline (inline) 0 0% 85.98% 1395ms 1.09% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 85.98% 1365ms 1.06% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 85.98% 1365ms 1.06% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 85.98% 1365ms 1.06% boost_numeric_ublas_abs (inline) 1365ms 1.06% 87.04% 1365ms 1.06% std::abs (inline) 5ms 0.0039% 87.04% 1318ms 1.03% VecMAXPY 1306ms 1.02% 88.06% 1313ms 1.02% VecMAXPY_Seq 4ms 0.0031% 88.06% 1137ms 0.89% KSP_RemoveNullSpace (inline) 9ms 0.007% 88.07% 1126ms 0.88% boost::numeric::ublas::matrix_assign (inline) 219ms 0.17% 88.24% 1113ms 0.87% boost::numeric::ublas::indexing_matrix_assign 0 0% 88.24% 1017ms 0.79% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 88.24% 1017ms 0.79% CuboidMeshConstructor::Construct 0 0% 88.24% 1017ms 0.79% DistributedTetrahedralMesh::ConstructCuboid 668ms 0.52% 88.76% 978ms 0.76% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 968ms 0.75% 89.52% 968ms 0.75% [libchaste_heart.so] 2ms 0.0016% 89.52% 911ms 0.71% Element::Element 7ms 0.0055% 89.52% 904ms 0.7% VecScale 2ms 0.0016% 89.52% 897ms 0.7% VecScale_Seq 2ms 0.0016% 89.53% 893ms 0.7% BidomainAssembler::ComputeMatrixTerm 2ms 0.0016% 89.53% 893ms 0.7% VecNorm 892ms 0.69% 90.22% 892ms 0.69% dscal_ 2ms 0.0016% 90.22% 884ms 0.69% AbstractTetrahedralElement::CalculateJacobian 1ms 0.00078% 90.22% 883ms 0.69% VecNorm_Seq 6ms 0.0047% 90.23% 865ms 0.67% boost::numeric::ublas::c_matrix::c_matrix (inline) 5ms 0.0039% 90.23% 856ms 0.67% AbstractBidomainSolver::FinaliseLinearSystem 249ms 0.19% 90.43% 847ms 0.66% AbstractBidomainSolver::CheckCompatibilityCondition 0 0% 90.43% 840ms 0.65% AbstractTetrahedralElement::AbstractTetrahedralElement 715ms 0.56% 90.98% 715ms 0.56% __memset_avx2_unaligned_erms 0 0% 90.98% 710ms 0.55% PetscMemzero (inline) 695ms 0.54% 91.53% 695ms 0.54% log_inline (inline) 4ms 0.0031% 91.53% 663ms 0.52% VecDuplicate 4ms 0.0031% 91.53% 662ms 0.52% BidomainProblem::WriteOneStep