File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12830ms, 85.95% of 14927ms total Dropped 729 nodes (cum <= 74.64ms) flat flat% sum% cum cum% 0 0% 0% 14918ms 99.94% __libc_start_call_main 0 0% 0% 14918ms 99.94% __libc_start_main_impl 0 0% 0% 14918ms 99.94% _start 0 0% 0% 14914ms 99.91% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14914ms 99.91% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14914ms 99.91% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14914ms 99.91% main 0 0% 0% 14876ms 99.66% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14876ms 99.66% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14876ms 99.66% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 2ms 0.013% 0.013% 14854ms 99.51% AbstractCardiacProblem::Solve 3ms 0.02% 0.033% 11490ms 76.97% AbstractDynamicLinearPdeSolver::Solve 70ms 0.47% 0.5% 9077ms 60.81% AbstractCardiacTissue::SolveCellSystems 95ms 0.64% 1.14% 5526ms 37.02% AbstractCardiacCell::ComputeExceptVoltage 119ms 0.8% 1.94% 4873ms 32.65% AbstractOneStepIvpOdeSolver::InternalSolve 151ms 1.01% 2.95% 4195ms 28.10% EulerIvpOdeSolver::CalculateNextYValue 897ms 6.01% 8.96% 3999ms 26.79% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1751ms 11.73% 20.69% 3638ms 24.37% __GI___exp 1ms 0.0067% 20.69% 3298ms 22.09% MonodomainProblem::WriteOneStep 2ms 0.013% 20.71% 3173ms 21.26% Hdf5DataWriter::PutVector 2ms 0.013% 20.72% 3154ms 21.13% H5Dwrite 2ms 0.013% 20.73% 3123ms 20.92% H5D__write 114ms 0.76% 21.50% 2869ms 19.22% AbstractCardiacTissue::UpdateCaches (inline) 805ms 5.39% 26.89% 2675ms 17.92% CellLuoRudy1991FromCellML::GetIIonic 0 0% 26.89% 1882ms 12.61% H5D__chunk_collective_write 20ms 0.13% 27.02% 1882ms 12.61% H5F_set_coll_metadata_reads 1486ms 9.96% 36.98% 1815ms 12.16% __ieee754_exp_fma 14ms 0.094% 37.07% 1653ms 11.07% H5FD_s3comms_uriencode 0 0% 37.07% 1594ms 10.68% LinearSystem::Solve 0 0% 37.07% 1457ms 9.76% KSPSolve 4ms 0.027% 37.10% 1457ms 9.76% KSPSolve_Private 3ms 0.02% 37.12% 1446ms 9.69% KSPSolve_CG 44ms 0.29% 37.42% 1294ms 8.67% 2ms 0.013% 37.43% 1286ms 8.62% H5F_block_write 2ms 0.013% 37.44% 1284ms 8.60% H5PB_write 2ms 0.013% 37.46% 1282ms 8.59% H5F__accum_write 1ms 0.0067% 37.46% 1280ms 8.58% H5FD_write 1ms 0.0067% 37.47% 1195ms 8.01% H5D__mpio_select_write 9ms 0.06% 37.53% 1136ms 7.61% H5D__chunk_cacheable 0 0% 37.53% 1078ms 7.22% PMPI_File_write_at_all 1053ms 7.05% 44.58% 1055ms 7.07% __GI_pwritev64 2ms 0.013% 44.60% 1049ms 7.03% std::pow (inline) 95ms 0.64% 45.23% 1047ms 7.01% __pow 304ms 2.04% 47.27% 988ms 6.62% H5S_select_iterate 97ms 0.65% 47.92% 952ms 6.38% __ieee754_pow_fma 390ms 2.61% 50.53% 789ms 5.29% MonodomainSolver::SetupLinearSystem 0 0% 50.53% 759ms 5.08% PCApply 1ms 0.0067% 50.54% 756ms 5.06% PCApply_BJacobi_Singleblock 2ms 0.013% 50.55% 728ms 4.88% KSPSolve_PREONLY 2ms 0.013% 50.57% 725ms 4.86% MatSolve 0 0% 50.57% 725ms 4.86% PCApply_ICC 715ms 4.79% 55.36% 723ms 4.84% MatSolve_SeqSBAIJ_1_NaturalOrdering 79ms 0.53% 55.89% 693ms 4.64% H5D__chunk_set_sizes 6ms 0.04% 55.93% 653ms 4.37% MatMult 645ms 4.32% 60.25% 647ms 4.33% MatMult_SeqAIJ 1ms 0.0067% 60.25% 525ms 3.52% KSP_PCApply.lto_priv.7 471ms 3.16% 63.41% 471ms 3.16% log_inline (inline) 65ms 0.44% 63.84% 463ms 3.10% H5S_mpio_space_type 194ms 1.30% 65.14% 430ms 2.88% CellLuoRudy1991FromCellML::VerifyStateVariables 327ms 2.19% 67.33% 345ms 2.31% exp_inline (inline) 2ms 0.013% 67.35% 316ms 2.12% KSPConvergedDefault 209ms 1.40% 68.75% 274ms 1.84% top12 (inline) 96ms 0.64% 69.39% 256ms 1.72% TimeStepper::TimeStepper 241ms 1.61% 71.01% 241ms 1.61% [libchaste_heart.so] 0 0% 71.01% 239ms 1.60% KSP_PCApply 11ms 0.074% 71.08% 220ms 1.47% H5VM_chunk_index 41ms 0.27% 71.35% 211ms 1.41% __GI___libc_malloc 154ms 1.03% 72.39% 199ms 1.33% _int_malloc 27ms 0.18% 72.57% 187ms 1.25% __GI___libc_free 15ms 0.1% 72.67% 183ms 1.23% ompi_datatype_destroy 8ms 0.054% 72.72% 180ms 1.21% MPI_Type_free 178ms 1.19% 73.91% 178ms 1.19% asuint64 (inline) 42ms 0.28% 74.19% 171ms 1.15% AbstractCardiacCell::SetVoltage (partial-inline) 8ms 0.054% 74.25% 166ms 1.11% ompi_datatype_create 164ms 1.10% 75.35% 164ms 1.10% ddot_ 60ms 0.4% 75.75% 159ms 1.07% _int_free 132ms 0.88% 76.63% 158ms 1.06% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 6ms 0.04% 76.67% 154ms 1.03% ompi_info_register_framework_params 30ms 0.2% 76.87% 153ms 1.02% ompi_datatype_release_args 152ms 1.02% 77.89% 152ms 1.02% TimeStepper::CalculateNextTime 102ms 0.68% 78.58% 138ms 0.92% AbstractOneStepIvpOdeSolver::Solve 0 0% 78.58% 132ms 0.88% PMPI_File_set_view 60ms 0.4% 78.98% 129ms 0.86% H5S_hyper_add_span_element 25ms 0.17% 79.15% 126ms 0.84% H5S_set_version 0 0% 79.15% 124ms 0.83% Hdf5DataWriter::PutUnlimitedVariable 0 0% 79.15% 124ms 0.83% VecDuplicate 4ms 0.027% 79.17% 124ms 0.83% VecDuplicate_MPI 52ms 0.35% 79.52% 123ms 0.82% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 117ms 0.78% 80.30% 117ms 0.78% H5VM_chunk_index_scaled 82ms 0.55% 80.85% 113ms 0.76% AbstractParameterisedSystem::GetAnyVariable 110ms 0.74% 81.59% 110ms 0.74% __memcpy_avx_unaligned_erms 92ms 0.62% 82.21% 108ms 0.72% AbstractParameterisedSystem::SetAnyVariable 103ms 0.69% 82.90% 104ms 0.7% __ieee754_log_fma 1ms 0.0067% 82.90% 102ms 0.68% VecTDot 45ms 0.3% 83.20% 101ms 0.68% H5VM_array_calc 0 0% 83.20% 100ms 0.67% VecTDot_Seq 0 0% 83.20% 100ms 0.67% VecXDot_Seq_Private.constprop.0 2ms 0.013% 83.22% 98ms 0.66% VecNorm 0 0% 83.22% 95ms 0.64% VecNorm_Seq 92ms 0.62% 83.83% 92ms 0.62% H5VM_array_offset_pre 1ms 0.0067% 83.84% 91ms 0.61% ompi_datatype_duplicate 1ms 0.0067% 83.85% 90ms 0.6% PMPI_Type_create_resized 41ms 0.27% 84.12% 88ms 0.59% H5S_select_iter_next 31ms 0.21% 84.33% 83ms 0.56% ompi_datatype_set_args 3ms 0.02% 84.35% 81ms 0.54% MPI_Type_create_hindexed 56ms 0.38% 84.73% 81ms 0.54% TimeStepper::AdvanceOneTimeStep 50ms 0.33% 85.06% 81ms 0.54% std::__cxx11::basic_string::basic_string 36ms 0.24% 85.30% 80ms 0.54% H5SL_search 21ms 0.14% 85.44% 76ms 0.51% AbstractCardiacCell::GetVoltage (inline) 76ms 0.51% 85.95% 76ms 0.51% std::isinf (inline)