File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 409ms, 84.33% of 485ms total Dropped 233 nodes (cum <= 2.42ms) flat flat% sum% cum cum% 0 0% 0% 476ms 98.14% __libc_start_call_main 0 0% 0% 476ms 98.14% __libc_start_main_impl 0 0% 0% 476ms 98.14% _start 0 0% 0% 473ms 97.53% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 473ms 97.53% CxxTest::TestRunner::runAllTests 0 0% 0% 473ms 97.53% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 473ms 97.53% main 0 0% 0% 433ms 89.28% CxxTest::RealTestDescription::run 0 0% 0% 433ms 89.28% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 433ms 89.28% CxxTest::TestRunner::runTest (inline) 0 0% 0% 433ms 89.28% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 433ms 89.28% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 427ms 88.04% AbstractCardiacProblem::Solve 0 0% 0% 424ms 87.42% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 378ms 77.94% LinearSystem::Solve 0 0% 0% 376ms 77.53% KSPSolve 0 0% 0% 376ms 77.53% KSPSolve_Private 0 0% 0% 375ms 77.32% KSPSolve_CG 0 0% 0% 226ms 46.60% KSP_PCApply.lto_priv.7 0 0% 0% 221ms 45.57% PCApply 0 0% 0% 220ms 45.36% PCApply_BJacobi_Singleblock 0 0% 0% 187ms 38.56% KSPSolve_PREONLY (partial-inline) 0 0% 0% 174ms 35.88% MatSolve 173ms 35.67% 35.67% 174ms 35.88% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 35.67% 174ms 35.88% PCApply_ICC 0 0% 35.67% 71ms 14.64% MatMult 0 0% 35.67% 71ms 14.64% MatMult_SeqAIJ 70ms 14.43% 50.10% 71ms 14.64% MatMult_SeqAIJ_Inode (inline) 50ms 10.31% 60.41% 50ms 10.31% ddot_ 1ms 0.21% 60.62% 39ms 8.04% AbstractCardiacTissue::SolveCellSystems 1ms 0.21% 60.82% 38ms 7.84% VecTDot 0 0% 60.82% 37ms 7.63% CxxTest::RealWorldDescription::setUp 0 0% 60.82% 37ms 7.63% PMPI_Init_thread 0 0% 60.82% 37ms 7.63% PetscInitialize 0 0% 60.82% 37ms 7.63% PetscSetup::setUpWorld 0 0% 60.82% 37ms 7.63% PetscSetupUtils::CommonSetup 0 0% 60.82% 37ms 7.63% PetscSetupUtils::InitialisePetsc 0 0% 60.82% 37ms 7.63% VecTDot_Seq 0 0% 60.82% 37ms 7.63% VecXDot_Seq_Private.constprop.0 0 0% 60.82% 37ms 7.63% ompi_mpi_init 0 0% 60.82% 33ms 6.80% MatNullSpaceRemove 0 0% 60.82% 31ms 6.39% 0 0% 60.82% 22ms 4.54% orte_init 0 0% 60.82% 18ms 3.71% __GI__dl_catch_exception 0 0% 60.82% 18ms 3.71% _dl_catch_error 0 0% 60.82% 18ms 3.71% _dlerror_run 0 0% 60.82% 17ms 3.51% AbstractCardiacCell::ComputeExceptVoltage 0 0% 60.82% 17ms 3.51% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 60.82% 17ms 3.51% VecMDot 1ms 0.21% 61.03% 17ms 3.51% VecMXDot_Private 0 0% 61.03% 17ms 3.51% mca_base_framework_open 0 0% 61.03% 17ms 3.51% opal_stackframe_output 0 0% 61.03% 16ms 3.30% AbstractCardiacTissue::UpdateCaches (inline) 0 0% 61.03% 16ms 3.30% VecAYPX 16ms 3.30% 64.33% 16ms 3.30% VecAYPX_Seq 1ms 0.21% 64.54% 16ms 3.30% VecMAXPY 15ms 3.09% 67.63% 16ms 3.30% VecMDot_Seq 9ms 1.86% 69.48% 16ms 3.30% __GI___exp 0 0% 69.48% 16ms 3.30% ___dlopen 0 0% 69.48% 16ms 3.30% _dl_open 0 0% 69.48% 16ms 3.30% dl_open_worker 0 0% 69.48% 16ms 3.30% dlopen_doit 0 0% 69.48% 16ms 3.30% dlopen_implementation (inline) 0 0% 69.48% 16ms 3.30% mca_base_framework_components_register 0 0% 69.48% 16ms 3.30% mca_base_framework_register 5ms 1.03% 70.52% 15ms 3.09% CellLuoRudy1991FromCellML::GetIIonic 1ms 0.21% 70.72% 15ms 3.09% EulerIvpOdeSolver::CalculateNextYValue 0 0% 70.72% 15ms 3.09% KSP_PCApply (partial-inline) 14ms 2.89% 73.61% 15ms 3.09% VecMAXPY_Seq 0 0% 73.61% 15ms 3.09% VecNorm 1ms 0.21% 73.81% 15ms 3.09% VecNorm_Seq 0 0% 73.81% 15ms 3.09% mca_base_component_find 0 0% 73.81% 15ms 3.09% mca_base_component_repository_open 2ms 0.41% 74.23% 14ms 2.89% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 74.23% 14ms 2.89% hwloc_topology_load 0 0% 74.23% 13ms 2.68% hwloc_linux_get_tid_last_cpu_location 0 0% 74.23% 12ms 2.47% _dl_init 0 0% 74.23% 12ms 2.47% call_init (inline) 0 0% 74.23% 12ms 2.47% dl_open_worker_begin 0 0% 74.23% 9ms 1.86% VecDuplicate 0 0% 74.23% 8ms 1.65% VecDuplicate_Seq 1ms 0.21% 74.43% 8ms 1.65% _dl_map_object 0 0% 74.43% 8ms 1.65% _dl_start_user 1ms 0.21% 74.64% 8ms 1.65% boost::serialization::singleton::get_instance 1ms 0.21% 74.85% 7ms 1.44% VecAXPY 0 0% 74.85% 7ms 1.44% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 74.85% 7ms 1.44% mca_base_framework_components_open 0 0% 74.85% 7ms 1.44% mca_topo_base_dist_graph_neighbors_count 0 0% 74.85% 6ms 1.24% PetscMemcpy (inline) 1ms 0.21% 75.05% 6ms 1.24% VecAXPY_Seq 6ms 1.24% 76.29% 6ms 1.24% __ieee754_exp_fma 6ms 1.24% 77.53% 6ms 1.24% __memcpy_avx_unaligned_erms 0 0% 77.53% 5ms 1.03% BidomainSolver::SetupLinearSystem 1ms 0.21% 77.73% 5ms 1.03% VecCreate 0 0% 77.73% 5ms 1.03% __ieee754_pow_fma 0 0% 77.73% 5ms 1.03% __pow 0 0% 77.73% 5ms 1.03% _dl_map_object_from_fd 5ms 1.03% 78.76% 5ms 1.03% daxpy_ 0 0% 78.76% 5ms 1.03% opal_hwloc_base_get_topology 0 0% 78.76% 5ms 1.03% orte_ess_base_proc_binding 0 0% 78.76% 5ms 1.03% std::pow (inline) 0 0% 78.76% 4ms 0.82% AbstractCardiacProblem::Initialise 0 0% 78.76% 4ms 0.82% KSPConvergedDefault 0 0% 78.76% 4ms 0.82% VecCopy 0 0% 78.76% 4ms 0.82% VecCopy_Seq (partial-inline) 4ms 0.82% 79.59% 4ms 0.82% __GI___clock_nanosleep 4ms 0.82% 80.41% 4ms 0.82% __GI___libc_read 0 0% 80.41% 4ms 0.82% __GI___nanosleep 1ms 0.21% 80.62% 4ms 0.82% __cxa_finalize 4ms 0.82% 81.44% 4ms 0.82% __strcmp_avx2 0 0% 81.44% 4ms 0.82% _dl_call_fini 0 0% 81.44% 4ms 0.82% _dl_lookup_symbol_x 0 0% 81.44% 4ms 0.82% _dl_map_segments (inline) 0 0% 81.44% 4ms 0.82% _dl_open_relocate_one_object (inline) 0 0% 81.44% 4ms 0.82% _dl_relocate_object 2ms 0.41% 81.86% 4ms 0.82% _dl_runtime_resolve_xsavec 0 0% 81.86% 4ms 0.82% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 4ms 0.82% 82.68% 4ms 0.82% do_lookup_x 0 0% 82.68% 4ms 0.82% usleep 1ms 0.21% 82.89% 3ms 0.62% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 82.89% 3ms 0.62% CxxTest::RealWorldDescription::tearDown 0 0% 82.89% 3ms 0.62% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 82.89% 3ms 0.62% PetscFinalize 0 0% 82.89% 3ms 0.62% PetscLogObjCreateDefault 0 0% 82.89% 3ms 0.62% PetscSetup::tearDownWorld 0 0% 82.89% 3ms 0.62% PetscSetupUtils::CommonFinalize 0 0% 82.89% 3ms 0.62% ProgressReporter::Update 0 0% 82.89% 3ms 0.62% VecSetType 0 0% 82.89% 3ms 0.62% XOpenDisplay 0 0% 82.89% 3ms 0.62% [hwloc_gl.so] 0 0% 82.89% 3ms 0.62% [libxcb.so.1.1.0] 0 0% 82.89% 3ms 0.62% _GLOBAL__sub_I_ChasteParameters_3_4.cpp 0 0% 82.89% 3ms 0.62% _XConnectXCB 1ms 0.21% 83.09% 3ms 0.62% __GI___libc_malloc 3ms 0.62% 83.71% 3ms 0.62% __GI___libc_write 0 0% 83.71% 3ms 0.62% __GI_exit 3ms 0.62% 84.33% 3ms 0.62% __libc_openat64 0 0% 84.33% 3ms 0.62% __run_exit_handlers 0 0% 84.33% 3ms 0.62% _dl_fini 0 0% 84.33% 3ms 0.62% _dl_map_object_deps 0 0% 84.33% 3ms 0.62% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 84.33% 3ms 0.62% elf_dynamic_do_Rela (inline) 0 0% 84.33% 3ms 0.62% elf_machine_rela (inline) 0 0% 84.33% 3ms 0.62% ompi_mpi_finalize 0 0% 84.33% 3ms 0.62% openaux 0 0% 84.33% 3ms 0.62% operator new 0 0% 84.33% 3ms 0.62% resolve_map (inline) 0 0% 84.33% 3ms 0.62% std::__basic_file::xsputn 0 0% 84.33% 3ms 0.62% std::basic_filebuf::_M_convert_to_external 0 0% 84.33% 3ms 0.62% std::basic_filebuf::overflow 0 0% 84.33% 3ms 0.62% std::basic_filebuf::sync 0 0% 84.33% 3ms 0.62% std::endl (inline) 0 0% 84.33% 3ms 0.62% std::flush (inline) 0 0% 84.33% 3ms 0.62% std::ostream::flush 0 0% 84.33% 3ms 0.62% std::ostream::operator<< (inline) 0 0% 84.33% 3ms 0.62% xcb_connect_to_display_with_auth_info