File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12712ms, 85.27% of 14908ms total Dropped 786 nodes (cum <= 74.54ms) flat flat% sum% cum cum% 0 0% 0% 14896ms 99.92% __libc_start_call_main 0 0% 0% 14896ms 99.92% __libc_start_main_impl 0 0% 0% 14896ms 99.92% _start 0 0% 0% 14893ms 99.90% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14893ms 99.90% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14893ms 99.90% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14893ms 99.90% main 0 0% 0% 14843ms 99.56% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14843ms 99.56% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14843ms 99.56% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 3ms 0.02% 0.02% 14818ms 99.40% AbstractCardiacProblem::Solve 0 0% 0.02% 11358ms 76.19% AbstractDynamicLinearPdeSolver::Solve 79ms 0.53% 0.55% 9033ms 60.59% AbstractCardiacTissue::SolveCellSystems 104ms 0.7% 1.25% 5439ms 36.48% AbstractCardiacCell::ComputeExceptVoltage 110ms 0.74% 1.99% 4795ms 32.16% AbstractOneStepIvpOdeSolver::InternalSolve 171ms 1.15% 3.13% 4095ms 27.47% EulerIvpOdeSolver::CalculateNextYValue 883ms 5.92% 9.06% 3883ms 26.05% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1803ms 12.09% 21.15% 3542ms 23.76% __GI___exp 3ms 0.02% 21.17% 3396ms 22.78% MonodomainProblem::WriteOneStep 4ms 0.027% 21.20% 3249ms 21.79% Hdf5DataWriter::PutVector 1ms 0.0067% 21.20% 3227ms 21.65% H5Dwrite 4ms 0.027% 21.23% 3203ms 21.49% H5D__write 122ms 0.82% 22.05% 2877ms 19.30% AbstractCardiacTissue::UpdateCaches (inline) 802ms 5.38% 27.43% 2685ms 18.01% CellLuoRudy1991FromCellML::GetIIonic 0 0% 27.43% 1920ms 12.88% H5D__chunk_collective_write 13ms 0.087% 27.52% 1920ms 12.88% H5F_set_coll_metadata_reads 11ms 0.074% 27.59% 1711ms 11.48% H5FD_s3comms_uriencode 1355ms 9.09% 36.68% 1678ms 11.26% __ieee754_exp_fma 3ms 0.02% 36.70% 1542ms 10.34% LinearSystem::Solve 0 0% 36.70% 1433ms 9.61% KSPSolve 7ms 0.047% 36.75% 1433ms 9.61% KSPSolve_Private 2ms 0.013% 36.76% 1420ms 9.53% KSPSolve_CG 43ms 0.29% 37.05% 1386ms 9.30% 2ms 0.013% 37.06% 1367ms 9.17% H5F_block_write 2ms 0.013% 37.07% 1365ms 9.16% H5F__accum_write 0 0% 37.07% 1365ms 9.16% H5PB_write 0 0% 37.07% 1363ms 9.14% H5FD_write 4ms 0.027% 37.10% 1280ms 8.59% H5D__mpio_select_write 0 0% 37.10% 1178ms 7.90% PMPI_File_write_at_all 6ms 0.04% 37.14% 1166ms 7.82% H5D__chunk_cacheable 1150ms 7.71% 44.86% 1154ms 7.74% __GI_pwritev64 5ms 0.034% 44.89% 1027ms 6.89% std::pow (inline) 346ms 2.32% 47.21% 1026ms 6.88% H5S_select_iterate 104ms 0.7% 47.91% 1020ms 6.84% __pow 101ms 0.68% 48.58% 915ms 6.14% __ieee754_pow_fma 0 0% 48.58% 762ms 5.11% PCApply 0 0% 48.58% 761ms 5.10% PCApply_BJacobi_Singleblock 362ms 2.43% 51.01% 760ms 5.10% MonodomainSolver::SetupLinearSystem 0 0% 51.01% 725ms 4.86% KSPSolve_PREONLY 0 0% 51.01% 723ms 4.85% MatSolve 710ms 4.76% 55.78% 723ms 4.85% MatSolve_SeqSBAIJ_1_NaturalOrdering 0 0% 55.78% 723ms 4.85% PCApply_ICC 85ms 0.57% 56.35% 690ms 4.63% H5D__chunk_set_sizes 5ms 0.034% 56.38% 591ms 3.96% MatMult 585ms 3.92% 60.30% 586ms 3.93% MatMult_SeqAIJ 1ms 0.0067% 60.31% 558ms 3.74% KSP_PCApply.lto_priv.7 83ms 0.56% 60.87% 460ms 3.09% H5S_mpio_space_type 441ms 2.96% 63.82% 441ms 2.96% log_inline (inline) 217ms 1.46% 65.28% 426ms 2.86% CellLuoRudy1991FromCellML::VerifyStateVariables 323ms 2.17% 67.45% 340ms 2.28% exp_inline (inline) 127ms 0.85% 68.30% 274ms 1.84% TimeStepper::TimeStepper 4ms 0.027% 68.33% 272ms 1.82% KSPConvergedDefault 198ms 1.33% 69.65% 266ms 1.78% top12 (inline) 239ms 1.60% 71.26% 239ms 1.60% [libchaste_heart.so] 5ms 0.034% 71.29% 211ms 1.42% H5VM_chunk_index 45ms 0.3% 71.59% 208ms 1.40% __GI___libc_malloc 0 0% 71.59% 206ms 1.38% KSP_PCApply 144ms 0.97% 72.56% 193ms 1.29% _int_malloc 50ms 0.34% 72.89% 182ms 1.22% AbstractCardiacCell::SetVoltage (partial-inline) 175ms 1.17% 74.07% 175ms 1.17% asuint64 (inline) 7ms 0.047% 74.11% 167ms 1.12% ompi_datatype_destroy 6ms 0.04% 74.15% 160ms 1.07% ompi_datatype_create 33ms 0.22% 74.38% 159ms 1.07% __GI___libc_free 5ms 0.034% 74.41% 157ms 1.05% MPI_Type_free 156ms 1.05% 75.46% 156ms 1.05% ddot_ 154ms 1.03% 76.49% 154ms 1.03% TimeStepper::CalculateNextTime 105ms 0.7% 77.19% 148ms 0.99% AbstractOneStepIvpOdeSolver::Solve 3ms 0.02% 77.21% 146ms 0.98% ompi_info_register_framework_params 39ms 0.26% 77.48% 145ms 0.97% ompi_datatype_release_args 29ms 0.19% 77.67% 144ms 0.97% H5S_set_version 0 0% 77.67% 144ms 0.97% Hdf5DataWriter::PutUnlimitedVariable 123ms 0.83% 78.49% 143ms 0.96% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 53ms 0.36% 78.85% 129ms 0.87% H5S_hyper_add_span_element 53ms 0.36% 79.21% 126ms 0.85% _int_free 125ms 0.84% 80.04% 125ms 0.84% __memcpy_avx_unaligned_erms 50ms 0.34% 80.38% 119ms 0.8% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 118ms 0.79% 81.17% 118ms 0.79% H5VM_chunk_index_scaled 43ms 0.29% 81.46% 115ms 0.77% H5VM_array_calc 1ms 0.0067% 81.47% 110ms 0.74% PMPI_File_set_view 85ms 0.57% 82.04% 108ms 0.72% AbstractParameterisedSystem::SetAnyVariable 107ms 0.72% 82.75% 107ms 0.72% __ieee754_log_fma 85ms 0.57% 83.32% 106ms 0.71% AbstractParameterisedSystem::GetAnyVariable 2ms 0.013% 83.34% 102ms 0.68% VecTDot 1ms 0.0067% 83.34% 100ms 0.67% VecTDot_Seq 1ms 0.0067% 83.35% 99ms 0.66% VecXDot_Seq_Private.constprop.0 0 0% 83.35% 92ms 0.62% VecDuplicate 1ms 0.0067% 83.36% 92ms 0.62% VecDuplicate_MPI 88ms 0.59% 83.95% 88ms 0.59% H5VM_array_offset_pre 1ms 0.0067% 83.95% 86ms 0.58% PMPI_Type_create_resized 30ms 0.2% 84.16% 85ms 0.57% AbstractCardiacCell::GetVoltage (partial-inline) 1ms 0.0067% 84.16% 84ms 0.56% VecNorm 48ms 0.32% 84.48% 83ms 0.56% TimeStepper::AdvanceOneTimeStep 83ms 0.56% 85.04% 83ms 0.56% std::isinf (inline) 30ms 0.2% 85.24% 81ms 0.54% __libc_calloc 0 0% 85.24% 80ms 0.54% std::vector::_M_assign_aux (inline) 0 0% 85.24% 80ms 0.54% std::vector::assign (inline) 3ms 0.02% 85.26% 79ms 0.53% MPI_Type_create_hindexed 1ms 0.0067% 85.27% 79ms 0.53% ompi_datatype_duplicate 0 0% 85.27% 78ms 0.52% VecNorm_Seq