File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12709ms, 85.69% of 14832ms total Dropped 718 nodes (cum <= 74.16ms) flat flat% sum% cum cum% 0 0% 0% 14826ms 100% __libc_start_call_main 0 0% 0% 14826ms 100% __libc_start_main_impl 0 0% 0% 14826ms 100% _start 0 0% 0% 14823ms 99.94% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14823ms 99.94% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14823ms 99.94% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14823ms 99.94% main 0 0% 0% 14788ms 99.70% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14788ms 99.70% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14788ms 99.70% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 2ms 0.013% 0.013% 14765ms 99.55% AbstractCardiacProblem::Solve 4ms 0.027% 0.04% 11462ms 77.28% AbstractDynamicLinearPdeSolver::Solve 31ms 0.21% 0.25% 9185ms 61.93% AbstractCardiacTissue::SolveCellSystems 125ms 0.84% 1.09% 5596ms 37.73% AbstractCardiacCell::ComputeExceptVoltage 185ms 1.25% 2.34% 4808ms 32.42% AbstractOneStepIvpOdeSolver::InternalSolve 161ms 1.09% 3.43% 4071ms 27.45% EulerIvpOdeSolver::CalculateNextYValue 900ms 6.07% 9.49% 3861ms 26.03% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1689ms 11.39% 20.88% 3582ms 24.15% __GI___exp 1ms 0.0067% 20.89% 3233ms 21.80% MonodomainProblem::WriteOneStep 2ms 0.013% 20.90% 3097ms 20.88% Hdf5DataWriter::PutVector 1ms 0.0067% 20.91% 3082ms 20.78% H5Dwrite 5ms 0.034% 20.94% 3057ms 20.61% H5D__write 82ms 0.55% 21.49% 2724ms 18.37% AbstractCardiacTissue::UpdateCaches (inline) 852ms 5.74% 27.24% 2614ms 17.62% CellLuoRudy1991FromCellML::GetIIonic 1683ms 11.35% 38.59% 1825ms 12.30% __ieee754_exp_fma 0 0% 38.59% 1817ms 12.25% H5D__chunk_collective_write 18ms 0.12% 38.71% 1817ms 12.25% H5F_set_coll_metadata_reads 19ms 0.13% 38.83% 1597ms 10.77% H5FD_s3comms_uriencode 5ms 0.034% 38.87% 1510ms 10.18% LinearSystem::Solve 0 0% 38.87% 1368ms 9.22% KSPSolve 3ms 0.02% 38.89% 1368ms 9.22% KSPSolve_Private 6ms 0.04% 38.93% 1354ms 9.13% KSPSolve_CG 5ms 0.034% 38.96% 1224ms 8.25% H5F_block_write 43ms 0.29% 39.25% 1219ms 8.22% 2ms 0.013% 39.27% 1219ms 8.22% H5PB_write 1ms 0.0067% 39.27% 1217ms 8.21% H5F__accum_write 2ms 0.013% 39.29% 1216ms 8.20% H5FD_write 1ms 0.0067% 39.29% 1141ms 7.69% H5D__mpio_select_write 8ms 0.054% 39.35% 1137ms 7.67% H5D__chunk_cacheable 3ms 0.02% 39.37% 1040ms 7.01% PMPI_File_write_at_all 1010ms 6.81% 46.18% 1013ms 6.83% __GI_pwritev64 391ms 2.64% 48.81% 995ms 6.71% H5S_select_iterate 11ms 0.074% 48.89% 909ms 6.13% std::pow (inline) 91ms 0.61% 49.50% 897ms 6.05% __pow 127ms 0.86% 50.36% 805ms 5.43% __ieee754_pow_fma 298ms 2.01% 52.37% 741ms 5.00% MonodomainSolver::SetupLinearSystem 331ms 2.23% 54.60% 696ms 4.69% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 54.60% 686ms 4.63% PCApply 2ms 0.013% 54.61% 681ms 4.59% PCApply_BJacobi_Singleblock 3ms 0.02% 54.63% 661ms 4.46% MatMult 652ms 4.40% 59.03% 658ms 4.44% MatMult_SeqAIJ 0 0% 59.03% 649ms 4.38% KSPSolve_PREONLY 1ms 0.0067% 59.03% 648ms 4.37% PCApply_ICC 2ms 0.013% 59.05% 647ms 4.36% MatSolve 642ms 4.33% 63.38% 645ms 4.35% MatSolve_SeqSBAIJ_1_NaturalOrdering 68ms 0.46% 63.83% 609ms 4.11% H5D__chunk_set_sizes 1ms 0.0067% 63.84% 546ms 3.68% KSP_PCApply.lto_priv.7 57ms 0.38% 64.23% 468ms 3.16% H5S_mpio_space_type 371ms 2.50% 66.73% 371ms 2.50% log_inline (inline) 265ms 1.79% 68.51% 267ms 1.80% exp_inline (inline) 120ms 0.81% 69.32% 234ms 1.58% TimeStepper::TimeStepper 42ms 0.28% 69.61% 211ms 1.42% __GI___libc_malloc 1ms 0.0067% 69.61% 200ms 1.35% KSPConvergedDefault 158ms 1.07% 70.68% 194ms 1.31% _int_malloc 116ms 0.78% 71.46% 190ms 1.28% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 190ms 1.28% 72.74% 190ms 1.28% std::isinf (inline) 21ms 0.14% 72.88% 186ms 1.25% H5VM_chunk_index 98ms 0.66% 73.54% 181ms 1.22% top12 (inline) 152ms 1.02% 74.57% 178ms 1.20% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 166ms 1.12% 75.69% 166ms 1.12% [libchaste_heart.so] 26ms 0.18% 75.86% 162ms 1.09% AbstractCardiacCell::SetVoltage (partial-inline) 9ms 0.061% 75.92% 158ms 1.07% ompi_datatype_create 117ms 0.79% 76.71% 152ms 1.02% AbstractOneStepIvpOdeSolver::Solve 5ms 0.034% 76.75% 151ms 1.02% MPI_Type_free 4ms 0.027% 76.77% 149ms 1.00% ompi_datatype_destroy 0 0% 76.77% 145ms 0.98% KSP_PCApply 140ms 0.94% 77.72% 140ms 0.94% ddot_ 3ms 0.02% 77.74% 135ms 0.91% Hdf5DataWriter::PutUnlimitedVariable 44ms 0.3% 78.03% 133ms 0.9% ompi_datatype_release_args 5ms 0.034% 78.07% 133ms 0.9% ompi_info_register_framework_params 22ms 0.15% 78.22% 131ms 0.88% __GI___libc_free 125ms 0.84% 79.06% 125ms 0.84% __ieee754_log_fma 120ms 0.81% 79.87% 120ms 0.81% TimeStepper::CalculateNextTime 3ms 0.02% 79.89% 118ms 0.8% VecNorm 19ms 0.13% 80.02% 117ms 0.79% H5S_set_version 3ms 0.02% 80.04% 115ms 0.78% PMPI_File_set_view 58ms 0.39% 80.43% 110ms 0.74% H5S_hyper_add_span_element 3ms 0.02% 80.45% 110ms 0.74% VecNorm_Seq 40ms 0.27% 80.72% 109ms 0.73% _int_free 96ms 0.65% 81.36% 106ms 0.71% AbstractParameterisedSystem::SetAnyVariable 1ms 0.0067% 81.37% 103ms 0.69% VecDuplicate 4ms 0.027% 81.40% 102ms 0.69% VecDuplicate_MPI 41ms 0.28% 81.67% 98ms 0.66% H5VM_array_calc 4ms 0.027% 81.70% 92ms 0.62% PMPI_Type_create_resized 50ms 0.34% 82.04% 92ms 0.62% std::__cxx11::basic_string::basic_string 29ms 0.2% 82.23% 90ms 0.61% ompi_datatype_set_args 70ms 0.47% 82.71% 89ms 0.6% AbstractParameterisedSystem::GetAnyVariable 7ms 0.047% 82.75% 89ms 0.6% MPI_Type_create_hindexed 87ms 0.59% 83.34% 87ms 0.59% __memcpy_avx_unaligned_erms 86ms 0.58% 83.92% 86ms 0.58% asuint64 (inline) 84ms 0.57% 84.49% 84ms 0.57% H5VM_chunk_index_scaled 4ms 0.027% 84.51% 83ms 0.56% VecTDot 81ms 0.55% 85.06% 81ms 0.55% H5VM_array_offset_pre 37ms 0.25% 85.31% 80ms 0.54% TimeStepper::AdvanceOneTimeStep 3ms 0.02% 85.33% 80ms 0.54% ompi_datatype_duplicate 27ms 0.18% 85.51% 78ms 0.53% H5S_select_iter_next 4ms 0.027% 85.54% 76ms 0.51% opal_datatype_create_desc 22ms 0.15% 85.69% 75ms 0.51% __libc_calloc