File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 394ms, 87.75% of 449ms total Dropped 200 nodes (cum <= 2.25ms) flat flat% sum% cum cum% 0 0% 0% 441ms 98.22% __libc_start_call_main 0 0% 0% 441ms 98.22% __libc_start_main_impl 0 0% 0% 441ms 98.22% _start 0 0% 0% 438ms 97.55% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 438ms 97.55% CxxTest::TestRunner::runAllTests 0 0% 0% 438ms 97.55% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 438ms 97.55% main 0 0% 0% 400ms 89.09% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 400ms 89.09% CxxTest::TestRunner::runTest (inline) 0 0% 0% 399ms 88.86% CxxTest::RealTestDescription::run 0 0% 0% 399ms 88.86% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 399ms 88.86% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 394ms 87.75% AbstractCardiacProblem::Solve 0 0% 0% 393ms 87.53% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 348ms 77.51% LinearSystem::Solve 0 0% 0% 347ms 77.28% KSPSolve 2ms 0.45% 0.45% 347ms 77.28% KSPSolve_Private 0 0% 0.45% 346ms 77.06% KSPSolve_CG 0 0% 0.45% 209ms 46.55% KSP_PCApply.lto_priv.7 0 0% 0.45% 205ms 45.66% PCApply 0 0% 0.45% 205ms 45.66% PCApply_BJacobi_Singleblock 0 0% 0.45% 171ms 38.08% KSPSolve_PREONLY (partial-inline) 0 0% 0.45% 162ms 36.08% MatSolve 160ms 35.63% 36.08% 162ms 36.08% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 36.08% 162ms 36.08% PCApply_ICC 0 0% 36.08% 70ms 15.59% MatMult 3ms 0.67% 36.75% 70ms 15.59% MatMult_SeqAIJ (partial-inline) 67ms 14.92% 51.67% 70ms 15.59% MatMult_SeqAIJ_Inode (inline) 45ms 10.02% 61.69% 45ms 10.02% ddot_ 0 0% 61.69% 38ms 8.46% AbstractCardiacTissue::SolveCellSystems 0 0% 61.69% 35ms 7.80% CxxTest::RealWorldDescription::setUp 0 0% 61.69% 35ms 7.80% PetscInitialize 0 0% 61.69% 35ms 7.80% PetscSetup::setUpWorld 0 0% 61.69% 35ms 7.80% PetscSetupUtils::CommonSetup 0 0% 61.69% 35ms 7.80% PetscSetupUtils::InitialisePetsc 0 0% 61.69% 34ms 7.57% PMPI_Init_thread 0 0% 61.69% 34ms 7.57% ompi_mpi_init 0 0% 61.69% 30ms 6.68% VecTDot 0 0% 61.69% 30ms 6.68% VecTDot_Seq 0 0% 61.69% 30ms 6.68% VecXDot_Seq_Private.constprop.0 1ms 0.22% 61.92% 27ms 6.01% 0 0% 61.92% 25ms 5.57% MatNullSpaceRemove 0 0% 61.92% 25ms 5.57% orte_init 1ms 0.22% 62.14% 23ms 5.12% AbstractCardiacCell::ComputeExceptVoltage 9ms 2.00% 64.14% 21ms 4.68% __GI___exp 0 0% 64.14% 20ms 4.45% AbstractOneStepIvpOdeSolver::InternalSolve 4ms 0.89% 65.03% 19ms 4.23% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 65.03% 19ms 4.23% EulerIvpOdeSolver::CalculateNextYValue 0 0% 65.03% 17ms 3.79% VecMAXPY 16ms 3.56% 68.60% 17ms 3.79% VecMAXPY_Seq 0 0% 68.60% 16ms 3.56% VecNorm 0 0% 68.60% 16ms 3.56% VecNorm_Seq 0 0% 68.60% 15ms 3.34% __GI__dl_catch_exception 0 0% 68.60% 15ms 3.34% _dl_catch_error 0 0% 68.60% 15ms 3.34% _dlerror_run 0 0% 68.60% 15ms 3.34% hwloc_topology_load 0 0% 68.60% 14ms 3.12% opal_stackframe_output 0 0% 68.60% 13ms 2.90% KSP_PCApply (partial-inline) 0 0% 68.60% 13ms 2.90% hwloc_linux_get_tid_last_cpu_location 0 0% 68.60% 13ms 2.90% mca_base_framework_components_register 0 0% 68.60% 13ms 2.90% mca_base_framework_open 0 0% 68.60% 13ms 2.90% mca_base_framework_register 1ms 0.22% 68.82% 12ms 2.67% AbstractCardiacTissue::UpdateCaches (inline) 0 0% 68.82% 12ms 2.67% VecAYPX 12ms 2.67% 71.49% 12ms 2.67% VecAYPX_Seq 0 0% 71.49% 12ms 2.67% ___dlopen 12ms 2.67% 74.16% 12ms 2.67% __ieee754_exp_fma 0 0% 74.16% 12ms 2.67% _dl_open 0 0% 74.16% 12ms 2.67% dl_open_worker 0 0% 74.16% 12ms 2.67% dl_open_worker_begin 0 0% 74.16% 12ms 2.67% dlopen_doit 0 0% 74.16% 12ms 2.67% dlopen_implementation (inline) 3ms 0.67% 74.83% 11ms 2.45% CellLuoRudy1991FromCellML::GetIIonic 0 0% 74.83% 11ms 2.45% VecDuplicate 0 0% 74.83% 11ms 2.45% mca_base_component_find 0 0% 74.83% 11ms 2.45% mca_base_component_repository_open 0 0% 74.83% 10ms 2.23% VecDuplicate_Seq 1ms 0.22% 75.06% 9ms 2.00% VecSetType 1ms 0.22% 75.28% 9ms 2.00% _dl_map_object 0 0% 75.28% 8ms 1.78% VecCreate_Seq 0 0% 75.28% 8ms 1.78% VecMDot 8ms 1.78% 77.06% 8ms 1.78% VecMDot_Seq 0 0% 77.06% 8ms 1.78% VecMXDot_Private 0 0% 77.06% 8ms 1.78% _dl_init 1ms 0.22% 77.28% 8ms 1.78% _dl_runtime_resolve_xsavec 0 0% 77.28% 8ms 1.78% _dl_start_user 0 0% 77.28% 8ms 1.78% call_init (inline) 2ms 0.45% 77.73% 7ms 1.56% BidomainSolver::SetupLinearSystem 2ms 0.45% 78.17% 7ms 1.56% PetscMallocA 0 0% 78.17% 7ms 1.56% VecAXPY 0 0% 78.17% 7ms 1.56% VecAXPY_Seq 7ms 1.56% 79.73% 7ms 1.56% __memset_avx2_unaligned_erms 3ms 0.67% 80.40% 7ms 1.56% _dl_fixup 0 0% 80.40% 7ms 1.56% orte_ess_base_proc_binding 0 0% 80.40% 6ms 1.34% PetscMemcpy (inline) 0 0% 80.40% 6ms 1.34% PetscMemzero (inline) 0 0% 80.40% 6ms 1.34% VecDestroy 6ms 1.34% 81.74% 6ms 1.34% __memcpy_avx_unaligned_erms 0 0% 81.74% 6ms 1.34% _dl_map_object_from_fd 6ms 1.34% 83.07% 6ms 1.34% daxpy_ 0 0% 83.07% 6ms 1.34% opal_hwloc_base_get_topology 0 0% 83.07% 5ms 1.11% AbstractCardiacProblem::Initialise 0 0% 83.07% 5ms 1.11% PetscMallocAlign (partial-inline) 0 0% 83.07% 5ms 1.11% _dl_map_segments (inline) 1ms 0.22% 83.30% 5ms 1.11% boost::serialization::singleton::get_instance 0 0% 83.30% 4ms 0.89% KSPConvergedDefault 1ms 0.22% 83.52% 4ms 0.89% PetscHeaderDestroy_Private 2ms 0.45% 83.96% 4ms 0.89% VecSet 2ms 0.45% 84.41% 4ms 0.89% __cxa_finalize 0 0% 84.41% 4ms 0.89% _dl_call_fini 0 0% 84.41% 4ms 0.89% _dl_lookup_symbol_x 0 0% 84.41% 4ms 0.89% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 2ms 0.45% 84.86% 3ms 0.67% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 84.86% 3ms 0.67% CxxTest::RealWorldDescription::tearDown 0 0% 84.86% 3ms 0.67% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 84.86% 3ms 0.67% PetscFinalize 0 0% 84.86% 3ms 0.67% PetscSetup::tearDownWorld 0 0% 84.86% 3ms 0.67% PetscSetupUtils::CommonFinalize 2ms 0.45% 85.30% 3ms 0.67% VecCreate_Seq_Private (partial-inline) 0 0% 85.30% 3ms 0.67% XOpenDisplay 0 0% 85.30% 3ms 0.67% [hwloc_gl.so] 0 0% 85.30% 3ms 0.67% _XConnectXCB 3ms 0.67% 85.97% 3ms 0.67% __GI___libc_read 0 0% 85.97% 3ms 0.67% __GI_exit 0 0% 85.97% 3ms 0.67% __dlclose 3ms 0.67% 86.64% 3ms 0.67% __mmap64 0 0% 86.64% 3ms 0.67% __run_exit_handlers 0 0% 86.64% 3ms 0.67% _dl_close 0 0% 86.64% 3ms 0.67% _dl_close_worker (inline) 0 0% 86.64% 3ms 0.67% _dl_fini 0 0% 86.64% 3ms 0.67% _dl_map_object_deps 0 0% 86.64% 3ms 0.67% _dl_open_relocate_one_object (inline) 0 0% 86.64% 3ms 0.67% _dl_relocate_object 0 0% 86.64% 3ms 0.67% boost::archive::detail::pointer_iserializer::pointer_iserializer (inline) 2ms 0.45% 87.08% 3ms 0.67% do_lookup_x 0 0% 87.08% 3ms 0.67% mca_base_component_repository_release 0 0% 87.08% 3ms 0.67% mca_base_components_close 0 0% 87.08% 3ms 0.67% mca_base_framework_components_open 0 0% 87.08% 3ms 0.67% mca_topo_base_dist_graph_neighbors_count 0 0% 87.08% 3ms 0.67% ompi_mpi_finalize 0 0% 87.08% 3ms 0.67% openaux 3ms 0.67% 87.75% 3ms 0.67% strcmp