File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12804ms, 85.71% of 14939ms total Dropped 750 nodes (cum <= 74.69ms) flat flat% sum% cum cum% 0 0% 0% 14930ms 99.94% __libc_start_call_main 0 0% 0% 14930ms 99.94% __libc_start_main_impl 0 0% 0% 14930ms 99.94% _start 0 0% 0% 14927ms 99.92% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14927ms 99.92% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14927ms 99.92% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14927ms 99.92% main 0 0% 0% 14887ms 99.65% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14887ms 99.65% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14887ms 99.65% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 3ms 0.02% 0.02% 14864ms 99.50% AbstractCardiacProblem::Solve 1ms 0.0067% 0.027% 11415ms 76.41% AbstractDynamicLinearPdeSolver::Solve 38ms 0.25% 0.28% 9236ms 61.82% AbstractCardiacTissue::SolveCellSystems 140ms 0.94% 1.22% 5681ms 38.03% AbstractCardiacCell::ComputeExceptVoltage 114ms 0.76% 1.98% 4821ms 32.27% AbstractOneStepIvpOdeSolver::InternalSolve 204ms 1.37% 3.35% 4176ms 27.95% EulerIvpOdeSolver::CalculateNextYValue 962ms 6.44% 9.79% 3922ms 26.25% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1776ms 11.89% 21.67% 3562ms 23.84% __GI___exp 0 0% 21.67% 3377ms 22.61% MonodomainProblem::WriteOneStep 1ms 0.0067% 21.68% 3218ms 21.54% H5Dwrite 2ms 0.013% 21.69% 3216ms 21.53% Hdf5DataWriter::PutVector 8ms 0.054% 21.75% 3185ms 21.32% H5D__write 97ms 0.65% 22.40% 2586ms 17.31% AbstractCardiacTissue::UpdateCaches (inline) 729ms 4.88% 27.28% 2449ms 16.39% CellLuoRudy1991FromCellML::GetIIonic 0 0% 27.28% 1794ms 12.01% H5D__chunk_collective_write 12ms 0.08% 27.36% 1794ms 12.01% H5F_set_coll_metadata_reads 1557ms 10.42% 37.78% 1716ms 11.49% __ieee754_exp_fma 13ms 0.087% 37.87% 1601ms 10.72% H5FD_s3comms_uriencode 0 0% 37.87% 1467ms 9.82% LinearSystem::Solve 1ms 0.0067% 37.87% 1349ms 9.03% KSPSolve 2ms 0.013% 37.89% 1348ms 9.02% KSPSolve_Private 4ms 0.027% 37.91% 1319ms 8.83% KSPSolve_CG 8ms 0.054% 37.97% 1275ms 8.53% H5D__chunk_cacheable 2ms 0.013% 37.98% 1183ms 7.92% H5F_block_write 3ms 0.02% 38.00% 1181ms 7.91% H5PB_write 48ms 0.32% 38.32% 1178ms 7.89% 2ms 0.013% 38.34% 1178ms 7.89% H5F__accum_write 1ms 0.0067% 38.34% 1176ms 7.87% H5FD_write 452ms 3.03% 41.37% 1117ms 7.48% H5S_select_iterate 4ms 0.027% 41.40% 1092ms 7.31% H5D__mpio_select_write 0 0% 41.40% 993ms 6.65% PMPI_File_write_at_all 961ms 6.43% 47.83% 965ms 6.46% __GI_pwritev64 11ms 0.074% 47.90% 879ms 5.88% std::pow (inline) 79ms 0.53% 48.43% 868ms 5.81% __pow 340ms 2.28% 50.71% 793ms 5.31% CellLuoRudy1991FromCellML::VerifyStateVariables 103ms 0.69% 51.40% 788ms 5.27% __ieee754_pow_fma 1ms 0.0067% 51.40% 727ms 4.87% PCApply 1ms 0.0067% 51.41% 724ms 4.85% PCApply_BJacobi_Singleblock 297ms 1.99% 53.40% 696ms 4.66% MonodomainSolver::SetupLinearSystem 0 0% 53.40% 691ms 4.63% KSPSolve_PREONLY 2ms 0.013% 53.41% 689ms 4.61% MatSolve 0 0% 53.41% 689ms 4.61% PCApply_ICC 677ms 4.53% 57.94% 687ms 4.60% MatSolve_SeqSBAIJ_1_NaturalOrdering 62ms 0.42% 58.36% 679ms 4.55% H5D__chunk_set_sizes 4ms 0.027% 58.38% 564ms 3.78% MatMult 559ms 3.74% 62.13% 560ms 3.75% MatMult_SeqAIJ 51ms 0.34% 62.47% 509ms 3.41% H5S_mpio_space_type 0 0% 62.47% 503ms 3.37% KSP_PCApply.lto_priv.7 355ms 2.38% 64.84% 355ms 2.38% log_inline (inline) 292ms 1.95% 66.80% 301ms 2.01% exp_inline (inline) 2ms 0.013% 66.81% 288ms 1.93% KSPConvergedDefault 138ms 0.92% 67.74% 255ms 1.71% TimeStepper::TimeStepper 22ms 0.15% 67.88% 228ms 1.53% H5VM_chunk_index 0 0% 67.88% 224ms 1.50% KSP_PCApply 167ms 1.12% 69.00% 219ms 1.47% AbstractOneStepIvpOdeSolver::Solve 50ms 0.33% 69.34% 206ms 1.38% __GI___libc_malloc 201ms 1.35% 70.68% 201ms 1.35% std::isinf (inline) 126ms 0.84% 71.52% 196ms 1.31% top12 (inline) 149ms 1% 72.52% 190ms 1.27% _int_malloc 187ms 1.25% 73.77% 187ms 1.25% [libchaste_heart.so] 151ms 1.01% 74.78% 175ms 1.17% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 11ms 0.074% 74.86% 173ms 1.16% ompi_datatype_create 89ms 0.6% 75.45% 171ms 1.14% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 45ms 0.3% 75.75% 167ms 1.12% std::__cxx11::basic_string::basic_string 25ms 0.17% 75.92% 163ms 1.09% AbstractCardiacCell::SetVoltage (partial-inline) 1ms 0.0067% 75.93% 161ms 1.08% Hdf5DataWriter::PutUnlimitedVariable 24ms 0.16% 76.09% 150ms 1.00% H5S_set_version 32ms 0.21% 76.30% 147ms 0.98% __GI___libc_free 7ms 0.047% 76.35% 143ms 0.96% ompi_datatype_destroy 139ms 0.93% 77.28% 139ms 0.93% ddot_ 5ms 0.033% 77.31% 137ms 0.92% MPI_Type_free 130ms 0.87% 78.18% 130ms 0.87% TimeStepper::CalculateNextTime 47ms 0.31% 78.50% 126ms 0.84% H5VM_array_calc 4ms 0.027% 78.53% 123ms 0.82% PMPI_Type_create_resized 122ms 0.82% 79.34% 122ms 0.82% H5VM_chunk_index_scaled 10ms 0.067% 79.41% 119ms 0.8% ompi_info_register_framework_params 34ms 0.23% 79.64% 116ms 0.78% ompi_datatype_release_args 47ms 0.31% 79.95% 115ms 0.77% _int_free 101ms 0.68% 80.63% 113ms 0.76% AbstractParameterisedSystem::SetAnyVariable 68ms 0.46% 81.08% 113ms 0.76% H5S_hyper_add_span_element 1ms 0.0067% 81.09% 110ms 0.74% PMPI_File_set_view 1ms 0.0067% 81.10% 110ms 0.74% ompi_datatype_duplicate 104ms 0.7% 81.79% 104ms 0.7% __memcpy_avx_unaligned_erms 101ms 0.68% 82.47% 101ms 0.68% __ieee754_log_fma 2ms 0.013% 82.48% 97ms 0.65% VecDuplicate 2ms 0.013% 82.50% 95ms 0.64% VecDuplicate_MPI 5ms 0.033% 82.53% 94ms 0.63% VecNorm 93ms 0.62% 83.15% 93ms 0.62% std::vector::operator[] (inline) 70ms 0.47% 83.62% 92ms 0.62% AbstractParameterisedSystem::GetAnyVariable 87ms 0.58% 84.20% 87ms 0.58% H5VM_array_offset_pre 2ms 0.013% 84.22% 86ms 0.58% VecNorm_Seq 1ms 0.0067% 84.22% 86ms 0.58% std::char_traits::length (inline) 29ms 0.19% 84.42% 85ms 0.57% ompi_datatype_set_args 1ms 0.0067% 84.42% 84ms 0.56% VecTDot 0 0% 84.42% 83ms 0.56% VecTDot_Seq 0 0% 84.42% 83ms 0.56% VecXDot_Seq_Private.constprop.0 81ms 0.54% 84.97% 81ms 0.54% __strlen_avx2 4ms 0.027% 84.99% 80ms 0.54% PMPI_Type_vector 45ms 0.3% 85.29% 78ms 0.52% H5SL_search 0 0% 85.29% 78ms 0.52% opal_datatype_create_desc 39ms 0.26% 85.55% 76ms 0.51% AbstractCardiacCell::GetVoltage (partial-inline) 20ms 0.13% 85.69% 76ms 0.51% __libc_calloc 3ms 0.02% 85.71% 75ms 0.5% MPI_Type_contiguous