File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 347ms, 89.20% of 389ms total Dropped 165 nodes (cum <= 1.95ms) flat flat% sum% cum cum% 0 0% 0% 381ms 97.94% __libc_start_call_main 0 0% 0% 381ms 97.94% __libc_start_main_impl 0 0% 0% 381ms 97.94% _start 0 0% 0% 378ms 97.17% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 378ms 97.17% CxxTest::TestRunner::runAllTests 0 0% 0% 378ms 97.17% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 378ms 97.17% main 0 0% 0% 340ms 87.40% CxxTest::RealTestDescription::run 0 0% 0% 340ms 87.40% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 340ms 87.40% CxxTest::TestRunner::runTest (inline) 0 0% 0% 340ms 87.40% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 340ms 87.40% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 335ms 86.12% AbstractCardiacProblem::Solve 0 0% 0% 331ms 85.09% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 310ms 79.69% LinearSystem::Solve 0 0% 0% 309ms 79.43% KSPSolve 0 0% 0% 309ms 79.43% KSPSolve_Private 0 0% 0% 307ms 78.92% KSPSolve_CG 0 0% 0% 214ms 55.01% KSP_PCApply.lto_priv.7 0 0% 0% 204ms 52.44% PCApply 0 0% 0% 204ms 52.44% PCApply_BJacobi_Singleblock 0 0% 0% 178ms 45.76% KSPSolve_PREONLY (partial-inline) 0 0% 0% 162ms 41.65% MatSolve 159ms 40.87% 40.87% 162ms 41.65% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 40.87% 162ms 41.65% PCApply_ICC 0 0% 40.87% 42ms 10.80% MatMult 0 0% 40.87% 42ms 10.80% MatMult_SeqAIJ 42ms 10.80% 51.67% 42ms 10.80% MatMult_SeqAIJ_Inode (inline) 0 0% 51.67% 36ms 9.25% CxxTest::RealWorldDescription::setUp 0 0% 51.67% 36ms 9.25% PMPI_Init_thread 0 0% 51.67% 36ms 9.25% PetscInitialize 0 0% 51.67% 36ms 9.25% PetscSetup::setUpWorld 0 0% 51.67% 36ms 9.25% PetscSetupUtils::CommonSetup 0 0% 51.67% 36ms 9.25% PetscSetupUtils::InitialisePetsc 0 0% 51.67% 36ms 9.25% ompi_mpi_init 35ms 9.00% 60.67% 35ms 9.00% ddot_ 0 0% 60.67% 33ms 8.48% 1ms 0.26% 60.93% 31ms 7.97% MatNullSpaceRemove 0 0% 60.93% 26ms 6.68% VecTDot 0 0% 60.93% 26ms 6.68% VecTDot_Seq 2ms 0.51% 61.44% 26ms 6.68% VecXDot_Seq_Private.constprop.0 0 0% 61.44% 22ms 5.66% orte_init 0 0% 61.44% 19ms 4.88% AbstractCardiacTissue::SolveCellSystems 0 0% 61.44% 18ms 4.63% VecMDot 17ms 4.37% 65.81% 18ms 4.63% VecMDot_Seq 0 0% 65.81% 18ms 4.63% VecMXDot_Private 0 0% 65.81% 16ms 4.11% __GI__dl_catch_exception 0 0% 65.81% 16ms 4.11% _dl_catch_error 0 0% 65.81% 16ms 4.11% _dlerror_run 0 0% 65.81% 16ms 4.11% hwloc_topology_load 0 0% 65.81% 16ms 4.11% mca_base_framework_open 0 0% 65.81% 15ms 3.86% KSP_PCApply (inline) 1ms 0.26% 66.07% 15ms 3.86% hwloc_linux_get_tid_last_cpu_location 0 0% 66.07% 15ms 3.86% mca_base_framework_components_register 0 0% 66.07% 15ms 3.86% mca_base_framework_register 0 0% 66.07% 15ms 3.86% opal_stackframe_output 0 0% 66.07% 13ms 3.34% ___dlopen 0 0% 66.07% 13ms 3.34% _dl_open 0 0% 66.07% 13ms 3.34% dl_open_worker 0 0% 66.07% 13ms 3.34% dlopen_doit 0 0% 66.07% 13ms 3.34% dlopen_implementation (inline) 0 0% 66.07% 12ms 3.08% VecMAXPY 10ms 2.57% 68.64% 12ms 3.08% VecMAXPY_Seq 1ms 0.26% 68.89% 12ms 3.08% VecNorm 12ms 3.08% 71.98% 12ms 3.08% __memcpy_avx512_unaligned_erms 0 0% 71.98% 12ms 3.08% mca_base_component_find 0 0% 71.98% 12ms 3.08% mca_base_component_repository_open 0 0% 71.98% 11ms 2.83% PetscMemcpy (inline) 0 0% 71.98% 11ms 2.83% VecNorm_Seq 0 0% 71.98% 11ms 2.83% _dl_init 0 0% 71.98% 11ms 2.83% call_init (inline) 0 0% 71.98% 9ms 2.31% VecAYPX 9ms 2.31% 74.29% 9ms 2.31% VecAYPX_Seq 3ms 0.77% 75.06% 9ms 2.31% __GI___exp 0 0% 75.06% 8ms 2.06% AbstractCardiacCell::ComputeExceptVoltage 0 0% 75.06% 8ms 2.06% dl_open_worker_begin 0 0% 75.06% 7ms 1.80% AbstractCardiacTissue::UpdateCaches (inline) 1ms 0.26% 75.32% 7ms 1.80% AbstractOneStepIvpOdeSolver::InternalSolve 2ms 0.51% 75.84% 7ms 1.80% CellLuoRudy1991FromCellML::GetIIonic 0 0% 75.84% 7ms 1.80% VecCopy 0 0% 75.84% 7ms 1.80% VecCopy_Seq (partial-inline) 0 0% 75.84% 7ms 1.80% mca_base_framework_components_open 0 0% 75.84% 7ms 1.80% mca_topo_base_dist_graph_neighbors_count 0 0% 75.84% 7ms 1.80% opal_hwloc_base_get_topology 0 0% 75.84% 7ms 1.80% orte_ess_base_proc_binding 0 0% 75.84% 6ms 1.54% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 75.84% 6ms 1.54% EulerIvpOdeSolver::CalculateNextYValue 1ms 0.26% 76.09% 6ms 1.54% VecDestroy 0 0% 76.09% 6ms 1.54% VecDuplicate 6ms 1.54% 77.63% 6ms 1.54% __GI___libc_read 0 0% 77.63% 6ms 1.54% _dl_start_user 0 0% 77.63% 5ms 1.29% VecDuplicate_Seq 5ms 1.29% 78.92% 5ms 1.29% __GI___clock_nanosleep 0 0% 78.92% 5ms 1.29% __GI___nanosleep 3ms 0.77% 79.69% 5ms 1.29% __ieee754_exp_fma 0 0% 79.69% 5ms 1.29% _dl_map_object 0 0% 79.69% 5ms 1.29% usleep 1ms 0.26% 79.95% 4ms 1.03% PetscFunctionListAdd_Private 0 0% 79.95% 4ms 1.03% VecAXPY 0 0% 79.95% 4ms 1.03% VecAXPY_Seq 2ms 0.51% 80.46% 4ms 1.03% __cxa_finalize 0 0% 80.46% 4ms 1.03% _dl_call_fini 0 0% 80.46% 4ms 1.03% _dl_map_object_from_fd 0 0% 80.46% 4ms 1.03% _dl_map_segments (inline) 2ms 0.51% 80.98% 4ms 1.03% _dl_runtime_resolve_xsavec 0 0% 80.98% 4ms 1.03% boost::serialization::singleton::get_instance 4ms 1.03% 82.01% 4ms 1.03% daxpy_ 0 0% 82.01% 3ms 0.77% AbstractCardiacProblem::Initialise 0 0% 82.01% 3ms 0.77% PetscObjectComposeFunction_Petsc 0 0% 82.01% 3ms 0.77% PetscObjectComposeFunction_Private 0 0% 82.01% 3ms 0.77% VecCreate_Seq 1ms 0.26% 82.26% 3ms 0.77% VecCreate_Seq_Private (partial-inline) 0 0% 82.26% 3ms 0.77% VecSetType 0 0% 82.26% 3ms 0.77% XOpenDisplay 0 0% 82.26% 3ms 0.77% [hwloc_gl.so] 0 0% 82.26% 3ms 0.77% [libxcb.so.1.1.0] 0 0% 82.26% 3ms 0.77% _XConnectXCB 0 0% 82.26% 3ms 0.77% __GI_exit 0 0% 82.26% 3ms 0.77% __dlclose 0 0% 82.26% 3ms 0.77% __run_exit_handlers 0 0% 82.26% 3ms 0.77% _dl_close 1ms 0.26% 82.52% 3ms 0.77% _dl_close_worker (inline) 0 0% 82.52% 3ms 0.77% _dl_fini 0 0% 82.52% 3ms 0.77% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 82.52% 3ms 0.77% mca_base_component_repository_release 0 0% 82.52% 3ms 0.77% xcb_connect_to_display_with_auth_info 0 0% 82.52% 2ms 0.51% AbstractFeVolumeIntegralAssembler::DoAssemble 0 0% 82.52% 2ms 0.51% BidomainSolver::SetupLinearSystem 2ms 0.51% 83.03% 2ms 0.51% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 83.03% 2ms 0.51% CxxTest::RealWorldDescription::tearDown 0 0% 83.03% 2ms 0.51% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 83.03% 2ms 0.51% PetscFinalize 0 0% 83.03% 2ms 0.51% PetscFunctionListCreate_Private 0 0% 83.03% 2ms 0.51% PetscHMapFuncCreate (inline) 0 0% 83.03% 2ms 0.51% PetscHMapFuncCreateWithSize (inline) 1ms 0.26% 83.29% 2ms 0.51% PetscHeaderCreate_Private 0 0% 83.29% 2ms 0.51% PetscLayoutSetUp 0 0% 83.29% 2ms 0.51% PetscSetup::tearDownWorld 0 0% 83.29% 2ms 0.51% PetscSetupUtils::CommonFinalize 0 0% 83.29% 2ms 0.51% ProgressReporter::Update 0 0% 83.29% 2ms 0.51% TrianglesMeshReader::GetNextItemFromStream 0 0% 83.29% 2ms 0.51% VecCreate 0 0% 83.29% 2ms 0.51% VecDestroy_MPI 0 0% 83.29% 2ms 0.51% VecSet 1ms 0.26% 83.55% 2ms 0.51% VecSet_Seq 0 0% 83.55% 2ms 0.51% [hwloc_pci.so] 0 0% 83.55% 2ms 0.51% [libpciaccess.so.0.11.1] 0 0% 83.55% 2ms 0.51% __GI___libc_malloc 2ms 0.51% 84.06% 2ms 0.51% __GI___libc_write 0 0% 84.06% 2ms 0.51% __GI_getaddrinfo 0 0% 84.06% 2ms 0.51% __ieee754_pow_fma 0 0% 84.06% 2ms 0.51% __libc_calloc 2ms 0.51% 84.58% 2ms 0.51% __libc_openat64 2ms 0.51% 85.09% 2ms 0.51% __memset_avx512_unaligned_erms 2ms 0.51% 85.60% 2ms 0.51% __mmap64 0 0% 85.60% 2ms 0.51% __pow 0 0% 85.60% 2ms 0.51% _dl_fixup 0 0% 85.60% 2ms 0.51% _dl_lookup_symbol_x 0 0% 85.60% 2ms 0.51% _dl_map_object_deps 0 0% 85.60% 2ms 0.51% _dl_open_relocate_one_object (inline) 0 0% 85.60% 2ms 0.51% _dl_relocate_object 2ms 0.51% 86.12% 2ms 0.51% _int_malloc 2ms 0.51% 86.63% 2ms 0.51% asuint64 (inline) 0 0% 86.63% 2ms 0.51% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 1ms 0.26% 86.89% 2ms 0.51% boost::serialization::void_cast_detail::void_caster::recursive_register 1ms 0.26% 87.15% 2ms 0.51% boost::serialization::void_cast_detail::void_caster::recursive_unregister 0 0% 87.15% 2ms 0.51% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 87.15% 2ms 0.51% boost::serialization::void_cast_detail::void_caster_primitive::~void_caster_primitive (inline) 0 0% 87.15% 2ms 0.51% clone3 0 0% 87.15% 2ms 0.51% elf_dynamic_do_Rela (inline) 0 0% 87.15% 2ms 0.51% event_base_loop 0 0% 87.15% 2ms 0.51% event_del_nolock_ 0 0% 87.15% 2ms 0.51% kh_init_HMapFunc (inline) 2ms 0.51% 87.66% 2ms 0.51% log_inline (inline) 0 0% 87.66% 2ms 0.51% mca_base_component_var_register 0 0% 87.66% 2ms 0.51% mca_base_var_group_register 0 0% 87.66% 2ms 0.51% mca_base_var_register 2ms 0.51% 88.17% 2ms 0.51% memset 0 0% 88.17% 2ms 0.51% ompi_mpi_finalize 0 0% 88.17% 2ms 0.51% openaux 2ms 0.51% 88.69% 2ms 0.51% operator new 0 0% 88.69% 2ms 0.51% pci_get_strings 0 0% 88.69% 2ms 0.51% start_thread 0 0% 88.69% 2ms 0.51% std::__basic_file::xsputn 0 0% 88.69% 2ms 0.51% std::basic_filebuf::_M_convert_to_external 0 0% 88.69% 2ms 0.51% std::basic_filebuf::overflow 0 0% 88.69% 2ms 0.51% std::basic_filebuf::sync 0 0% 88.69% 2ms 0.51% std::endl (inline) 0 0% 88.69% 2ms 0.51% std::flush (inline) 0 0% 88.69% 2ms 0.51% std::ostream::flush 0 0% 88.69% 2ms 0.51% std::ostream::operator<< (inline) 0 0% 88.69% 2ms 0.51% std::pow (inline) 0 0% 88.69% 2ms 0.51% tcache_get (inline) 2ms 0.51% 89.20% 2ms 0.51% tcache_get_n (inline)