File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 433ms, 87.65% of 494ms total Dropped 213 nodes (cum <= 2.47ms) flat flat% sum% cum cum% 0 0% 0% 484ms 97.98% __libc_start_call_main 0 0% 0% 484ms 97.98% __libc_start_main_impl 0 0% 0% 484ms 97.98% _start 0 0% 0% 480ms 97.17% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 480ms 97.17% CxxTest::TestRunner::runAllTests 0 0% 0% 480ms 97.17% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 480ms 97.17% main 0 0% 0% 436ms 88.26% CxxTest::RealTestDescription::run 0 0% 0% 436ms 88.26% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 436ms 88.26% CxxTest::TestRunner::runTest (inline) 0 0% 0% 436ms 88.26% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 436ms 88.26% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 432ms 87.45% AbstractCardiacProblem::Solve 0 0% 0% 429ms 86.84% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 377ms 76.32% LinearSystem::Solve 0 0% 0% 375ms 75.91% KSPSolve 1ms 0.2% 0.2% 375ms 75.91% KSPSolve_Private 0 0% 0.2% 374ms 75.71% KSPSolve_CG 0 0% 0.2% 238ms 48.18% KSP_PCApply.lto_priv.7 1ms 0.2% 0.4% 229ms 46.36% PCApply 0 0% 0.4% 228ms 46.15% PCApply_BJacobi_Singleblock 0 0% 0.4% 190ms 38.46% KSPSolve_PREONLY (partial-inline) 0 0% 0.4% 178ms 36.03% MatSolve 178ms 36.03% 36.44% 178ms 36.03% MatSolve_SeqSBAIJ_1_NaturalOrdering 0 0% 36.44% 178ms 36.03% PCApply_ICC 59ms 11.94% 48.38% 59ms 11.94% ddot_ 0 0% 48.38% 56ms 11.34% MatMult 0 0% 48.38% 56ms 11.34% MatMult_SeqAIJ 56ms 11.34% 59.72% 56ms 11.34% MatMult_SeqAIJ_Inode (inline) 2ms 0.4% 60.12% 44ms 8.91% AbstractCardiacTissue::SolveCellSystems 0 0% 60.12% 40ms 8.10% CxxTest::RealWorldDescription::setUp 0 0% 60.12% 40ms 8.10% PetscInitialize 0 0% 60.12% 40ms 8.10% PetscSetup::setUpWorld 0 0% 60.12% 40ms 8.10% PetscSetupUtils::CommonSetup 0 0% 60.12% 40ms 8.10% PetscSetupUtils::InitialisePetsc 0 0% 60.12% 39ms 7.89% PMPI_Init_thread 0 0% 60.12% 39ms 7.89% ompi_mpi_init 3ms 0.61% 60.73% 34ms 6.88% 0 0% 60.73% 33ms 6.68% VecTDot 0 0% 60.73% 33ms 6.68% VecTDot_Seq 0 0% 60.73% 33ms 6.68% VecXDot_Seq_Private.constprop.0 0 0% 60.73% 32ms 6.48% MatNullSpaceRemove 1ms 0.2% 60.93% 26ms 5.26% AbstractCardiacCell::ComputeExceptVoltage 0 0% 60.93% 26ms 5.26% VecNorm 0 0% 60.93% 26ms 5.26% VecNorm_Seq 14ms 2.83% 63.77% 25ms 5.06% __GI___exp 1ms 0.2% 63.97% 23ms 4.66% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 63.97% 23ms 4.66% orte_init 3ms 0.61% 64.57% 21ms 4.25% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 64.57% 21ms 4.25% EulerIvpOdeSolver::CalculateNextYValue 0 0% 64.57% 20ms 4.05% VecMDot 2ms 0.4% 64.98% 20ms 4.05% VecMXDot_Private 18ms 3.64% 68.62% 18ms 3.64% VecMDot_Seq 0 0% 68.62% 17ms 3.44% mca_base_framework_open 0 0% 68.62% 16ms 3.24% __GI__dl_catch_exception 0 0% 68.62% 16ms 3.24% _dl_catch_error 0 0% 68.62% 16ms 3.24% _dlerror_run 0 0% 68.62% 16ms 3.24% mca_base_framework_register 1ms 0.2% 68.83% 16ms 3.24% opal_stackframe_output 0 0% 68.83% 15ms 3.04% mca_base_framework_components_register 0 0% 68.83% 14ms 2.83% ___dlopen 0 0% 68.83% 14ms 2.83% _dl_open 0 0% 68.83% 14ms 2.83% dlopen_doit 0 0% 68.83% 14ms 2.83% dlopen_implementation (inline) 0 0% 68.83% 14ms 2.83% hwloc_topology_load 0 0% 68.83% 14ms 2.83% mca_base_component_find 0 0% 68.83% 14ms 2.83% mca_base_component_repository_open 0 0% 68.83% 13ms 2.63% KSP_PCApply (partial-inline) 0 0% 68.83% 13ms 2.63% dl_open_worker 0 0% 68.83% 13ms 2.63% hwloc_linux_get_tid_last_cpu_location 0 0% 68.83% 12ms 2.43% AbstractCardiacTissue::UpdateCaches (inline) 0 0% 68.83% 12ms 2.43% CellLuoRudy1991FromCellML::GetIIonic 0 0% 68.83% 12ms 2.43% VecAYPX 12ms 2.43% 71.26% 12ms 2.43% VecAYPX_Seq 2ms 0.4% 71.66% 12ms 2.43% VecMAXPY 7ms 1.42% 73.08% 11ms 2.23% __ieee754_exp_fma 0 0% 73.08% 11ms 2.23% _dl_init 0 0% 73.08% 11ms 2.23% call_init (inline) 0 0% 73.08% 10ms 2.02% VecDestroy 10ms 2.02% 75.10% 10ms 2.02% VecMAXPY_Seq 0 0% 75.10% 10ms 2.02% dl_open_worker_begin 3ms 0.61% 75.71% 8ms 1.62% BidomainSolver::SetupLinearSystem 0 0% 75.71% 8ms 1.62% VecAXPY 0 0% 75.71% 8ms 1.62% VecAXPY_Seq 0 0% 75.71% 8ms 1.62% VecDuplicate 0 0% 75.71% 8ms 1.62% _dl_lookup_symbol_x 1ms 0.2% 75.91% 8ms 1.62% _dl_runtime_resolve_xsavec 0 0% 75.91% 8ms 1.62% _dl_start_user 8ms 1.62% 77.53% 8ms 1.62% daxpy_ 8ms 1.62% 79.15% 8ms 1.62% do_lookup_x 0 0% 79.15% 8ms 1.62% mca_base_framework_components_open 1ms 0.2% 79.35% 7ms 1.42% PetscHeaderDestroy_Private 1ms 0.2% 79.55% 7ms 1.42% PetscMallocA 0 0% 79.55% 7ms 1.42% VecDuplicate_Seq 4ms 0.81% 80.36% 7ms 1.42% _dl_fixup 0 0% 80.36% 7ms 1.42% mca_topo_base_dist_graph_neighbors_count 0 0% 80.36% 6ms 1.21% PetscMallocAlign (partial-inline) 0 0% 80.36% 6ms 1.21% VecCopy 0 0% 80.36% 6ms 1.21% VecCopy_Seq (partial-inline) 0 0% 80.36% 6ms 1.21% _dl_open_relocate_one_object (inline) 0 0% 80.36% 6ms 1.21% _dl_relocate_object 0 0% 80.36% 6ms 1.21% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 80.36% 6ms 1.21% boost::serialization::singleton::get_instance 0 0% 80.36% 6ms 1.21% elf_dynamic_do_Rela (inline) 0 0% 80.36% 6ms 1.21% elf_machine_rela (inline) 0 0% 80.36% 6ms 1.21% opal_hwloc_base_get_topology 0 0% 80.36% 6ms 1.21% orte_ess_base_proc_binding 0 0% 80.36% 6ms 1.21% resolve_map (inline) 0 0% 80.36% 5ms 1.01% PetscMemcpy (inline) 0 0% 80.36% 5ms 1.01% PetscMemzero (inline) 5ms 1.01% 81.38% 5ms 1.01% __GI___libc_read 2ms 0.4% 81.78% 5ms 1.01% __cxa_finalize 5ms 1.01% 82.79% 5ms 1.01% __memcpy_avx_unaligned_erms 5ms 1.01% 83.81% 5ms 1.01% __memset_avx2_unaligned_erms 0 0% 83.81% 5ms 1.01% _dl_call_fini 0 0% 83.81% 4ms 0.81% AbstractCardiacProblem::Initialise 0 0% 83.81% 4ms 0.81% CxxTest::RealWorldDescription::tearDown 0 0% 83.81% 4ms 0.81% PetscFinalize 0 0% 83.81% 4ms 0.81% PetscSetup::tearDownWorld 0 0% 83.81% 4ms 0.81% PetscSetupUtils::CommonFinalize 1ms 0.2% 84.01% 4ms 0.81% VecCreate 0 0% 84.01% 4ms 0.81% __GI_exit 0 0% 84.01% 4ms 0.81% __run_exit_handlers 0 0% 84.01% 4ms 0.81% _dl_fini 0 0% 84.01% 4ms 0.81% _dl_map_object 0 0% 84.01% 4ms 0.81% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 84.01% 4ms 0.81% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 84.01% 3ms 0.61% AbstractFeVolumeIntegralAssembler::DoAssemble 2ms 0.4% 84.41% 3ms 0.61% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 84.41% 3ms 0.61% KSPConvergedDefault 0 0% 84.41% 3ms 0.61% KSP_RemoveNullSpace (inline) 0 0% 84.41% 3ms 0.61% PMPI_Comm_get_attr 2ms 0.4% 84.82% 3ms 0.61% PetscFreeAlign 1ms 0.2% 85.02% 3ms 0.61% PetscHeaderCreate_Private 0 0% 85.02% 3ms 0.61% VecCreate_Seq 0 0% 85.02% 3ms 0.61% VecDestroy_Seq 0 0% 85.02% 3ms 0.61% VecSetType 0 0% 85.02% 3ms 0.61% XOpenDisplay 0 0% 85.02% 3ms 0.61% [hwloc_gl.so] 0 0% 85.02% 3ms 0.61% [libxcb.so.1.1.0] 0 0% 85.02% 3ms 0.61% _GLOBAL__sub_I_ChasteParameters_3_4.cpp 0 0% 85.02% 3ms 0.61% _XConnectXCB 0 0% 85.02% 3ms 0.61% __GI___libc_free 3ms 0.61% 85.63% 3ms 0.61% __libc_openat64 1ms 0.2% 85.83% 3ms 0.61% __pow 2ms 0.4% 86.23% 3ms 0.61% _int_free 3ms 0.61% 86.84% 3ms 0.61% asuint64 (inline) 0 0% 86.84% 3ms 0.61% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 2ms 0.4% 87.25% 3ms 0.61% boost::serialization::void_cast_detail::void_caster::recursive_unregister 0 0% 87.25% 3ms 0.61% boost::serialization::void_cast_detail::void_caster_primitive::~void_caster_primitive (inline) 1ms 0.2% 87.45% 3ms 0.61% ompi_attr_get_c 0 0% 87.45% 3ms 0.61% ompi_mpi_finalize 0 0% 87.45% 3ms 0.61% std::pow (inline) 1ms 0.2% 87.65% 3ms 0.61% top12 (inline) 0 0% 87.65% 3ms 0.61% xcb_connect_to_display_with_auth_info