File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 119038ms, 91.90% of 129526ms total Dropped 1163 nodes (cum <= 647.63ms) flat flat% sum% cum cum% 0 0% 0% 129511ms 100% __libc_start_call_main 0 0% 0% 129511ms 100% __libc_start_main_impl 0 0% 0% 129511ms 100% _start 0 0% 0% 129508ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 129508ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 129508ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 129508ms 100% main 0 0% 0% 129467ms 100% AbstractConvergenceTester::Converge 0 0% 0% 129467ms 100% CxxTest::RealTestDescription::run 0 0% 0% 129467ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 129467ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 129467ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 129467ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 4ms 0.0031% 0.0031% 128265ms 99.03% AbstractCardiacProblem::Solve 12ms 0.0093% 0.012% 127497ms 98.43% AbstractDynamicLinearPdeSolver::Solve 6ms 0.0046% 0.017% 69950ms 54.00% LinearSystem::Solve 0 0% 0.017% 69355ms 53.55% KSPSolve 11ms 0.0085% 0.025% 69355ms 53.55% KSPSolve_Private 11ms 0.0085% 0.034% 69006ms 53.28% KSPSolve_SYMMLQ 539ms 0.42% 0.45% 48374ms 37.35% AbstractCardiacTissue::SolveCellSystems 9ms 0.0069% 0.46% 40478ms 31.25% PCApply 7ms 0.0054% 0.46% 40460ms 31.24% PCApply_BJacobi_Singleblock 1080ms 0.83% 1.30% 38126ms 29.44% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 2ms 0.0015% 1.30% 38113ms 29.42% KSPSolve_PREONLY (partial-inline) 3ms 0.0023% 1.30% 37019ms 28.58% PCApply_ICC 10ms 0.0077% 1.31% 37016ms 28.58% MatSolve 36543ms 28.21% 29.52% 37006ms 28.57% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 2ms 0.0015% 29.52% 34708ms 26.80% KSP_PCApply.lto_priv.18 7773ms 6.00% 35.52% 33735ms 26.04% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 13ms 0.01% 35.53% 23038ms 17.79% MatMult 332ms 0.26% 35.79% 23025ms 17.78% MatMult_SeqAIJ (partial-inline) 22472ms 17.35% 53.14% 23022ms 17.77% MatMult_SeqAIJ_Inode (inline) 2236ms 1.73% 54.87% 16939ms 13.08% CardiacNewtonSolver::Solve 1882ms 1.45% 56.32% 10222ms 7.89% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 5651ms 4.36% 60.68% 10098ms 7.80% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 234ms 0.18% 60.86% 8741ms 6.75% AbstractCardiacTissue::UpdateCaches (inline) 1663ms 1.28% 62.15% 8161ms 6.30% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 8023ms 6.19% 68.34% 8023ms 6.19% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 1138ms 0.88% 69.22% 7938ms 6.13% BidomainSolver::SetupLinearSystem 0 0% 69.22% 7671ms 5.92% KSP_PCApply (partial-inline) 8ms 0.0062% 69.22% 7117ms 5.49% KSPConvergedDefault 4174ms 3.22% 72.45% 4251ms 3.28% __ieee754_log_fma 0 0% 72.45% 4130ms 3.19% boost::numeric::ublas::norm_inf (inline) 2849ms 2.20% 74.65% 4130ms 3.19% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 74.65% 4130ms 3.19% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 74.65% 4130ms 3.19% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 3366ms 2.60% 77.25% 3366ms 2.60% ddot_ 5ms 0.0039% 77.25% 3339ms 2.58% MatNullSpaceRemove 2064ms 1.59% 78.84% 3136ms 2.42% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 37ms 0.029% 78.87% 3048ms 2.35% std::pow (inline) 368ms 0.28% 79.16% 2992ms 2.31% __pow 7ms 0.0054% 79.16% 2894ms 2.23% VecDot 0 0% 79.16% 2887ms 2.23% VecDot_Seq 0 0% 79.16% 2887ms 2.23% VecXDot_Seq_Private.constprop.0 2684ms 2.07% 81.23% 2684ms 2.07% __memcpy_avx_unaligned_erms 0 0% 81.23% 2650ms 2.05% PetscMemcpy (inline) 362ms 0.28% 81.51% 2591ms 2.00% __ieee754_pow_fma 17ms 0.013% 81.53% 2219ms 1.71% VecCopy 13ms 0.01% 81.54% 2215ms 1.71% VecAXPY 5ms 0.0039% 81.54% 2202ms 1.70% VecAXPY_Seq 5ms 0.0039% 81.54% 2197ms 1.70% VecCopy_Seq (partial-inline) 2175ms 1.68% 83.22% 2175ms 1.68% daxpy_ 5ms 0.0039% 83.23% 2103ms 1.62% VecMDot 11ms 0.0085% 83.24% 2098ms 1.62% VecMXDot_Private 2080ms 1.61% 84.84% 2085ms 1.61% VecMDot_Seq 1ms 0.00077% 84.84% 2006ms 1.55% AbstractFeVolumeIntegralAssembler::DoAssemble 23ms 0.018% 84.86% 1673ms 1.29% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1437ms 1.11% 85.97% 1493ms 1.15% exp_inline (inline) 0 0% 85.97% 1389ms 1.07% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 85.97% 1270ms 0.98% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 85.97% 1270ms 0.98% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 85.97% 1270ms 0.98% boost_numeric_ublas_abs (inline) 1270ms 0.98% 86.95% 1270ms 0.98% std::abs (inline) 9ms 0.0069% 86.96% 1231ms 0.95% VecMAXPY 1215ms 0.94% 87.89% 1222ms 0.94% VecMAXPY_Seq 6ms 0.0046% 87.90% 1105ms 0.85% boost::numeric::ublas::matrix_assign (inline) 219ms 0.17% 88.07% 1093ms 0.84% boost::numeric::ublas::indexing_matrix_assign 1057ms 0.82% 88.88% 1057ms 0.82% [libchaste_heart.so] 646ms 0.5% 89.38% 1037ms 0.8% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 0 0% 89.38% 1033ms 0.8% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 89.38% 1033ms 0.8% CuboidMeshConstructor::Construct 4ms 0.0031% 89.39% 1033ms 0.8% DistributedTetrahedralMesh::ConstructCuboid 5ms 0.0039% 89.39% 912ms 0.7% Element::Element 4ms 0.0031% 89.39% 888ms 0.69% BidomainAssembler::ComputeMatrixTerm 1ms 0.00077% 89.39% 878ms 0.68% AbstractBidomainSolver::FinaliseLinearSystem 266ms 0.21% 89.60% 875ms 0.68% AbstractBidomainSolver::CheckCompatibilityCondition 3ms 0.0023% 89.60% 862ms 0.67% AbstractTetrahedralElement::CalculateJacobian 6ms 0.0046% 89.61% 843ms 0.65% boost::numeric::ublas::c_matrix::c_matrix (inline) 1ms 0.00077% 89.61% 826ms 0.64% VecNorm 1ms 0.00077% 89.61% 825ms 0.64% AbstractTetrahedralElement::AbstractTetrahedralElement 0 0% 89.61% 813ms 0.63% VecNorm_Seq 11ms 0.0085% 89.62% 806ms 0.62% VecScale 1ms 0.00077% 89.62% 795ms 0.61% VecScale_Seq 793ms 0.61% 90.23% 793ms 0.61% dscal_ 764ms 0.59% 90.82% 764ms 0.59% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 706ms 0.55% 91.36% 706ms 0.55% log_inline (inline) 697ms 0.54% 91.90% 697ms 0.54% __memset_avx2_unaligned_erms 0 0% 91.90% 696ms 0.54% BidomainProblem::WriteOneStep 0 0% 91.90% 678ms 0.52% PetscMemzero (inline) 1ms 0.00077% 91.90% 661ms 0.51% VecDuplicate