File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 398ms, 87.47% of 455ms total Dropped 193 nodes (cum <= 2.27ms) flat flat% sum% cum cum% 0 0% 0% 448ms 98.46% __libc_start_call_main 0 0% 0% 448ms 98.46% __libc_start_main_impl 0 0% 0% 448ms 98.46% _start 0 0% 0% 445ms 97.80% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 445ms 97.80% CxxTest::TestRunner::runAllTests 0 0% 0% 445ms 97.80% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 445ms 97.80% main 0 0% 0% 408ms 89.67% CxxTest::RealTestDescription::run 0 0% 0% 408ms 89.67% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 408ms 89.67% CxxTest::TestRunner::runTest (inline) 0 0% 0% 408ms 89.67% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 408ms 89.67% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 404ms 88.79% AbstractCardiacProblem::Solve 0 0% 0% 400ms 87.91% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 369ms 81.10% LinearSystem::Solve 0 0% 0% 368ms 80.88% KSPSolve 0 0% 0% 368ms 80.88% KSPSolve_Private 0 0% 0% 367ms 80.66% KSPSolve_CG 0 0% 0% 221ms 48.57% KSP_PCApply.lto_priv.7 1ms 0.22% 0.22% 215ms 47.25% PCApply 0 0% 0.22% 215ms 47.25% PCApply_BJacobi_Singleblock 0 0% 0.22% 184ms 40.44% KSPSolve_PREONLY (partial-inline) 0 0% 0.22% 170ms 37.36% MatSolve 166ms 36.48% 36.70% 170ms 37.36% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 36.70% 170ms 37.36% PCApply_ICC 0 0% 36.70% 73ms 16.04% MatMult 1ms 0.22% 36.92% 73ms 16.04% MatMult_SeqAIJ (partial-inline) 72ms 15.82% 52.75% 73ms 16.04% MatMult_SeqAIJ_Inode (inline) 50ms 10.99% 63.74% 50ms 10.99% ddot_ 0 0% 63.74% 39ms 8.57% VecTDot 0 0% 63.74% 39ms 8.57% VecTDot_Seq 0 0% 63.74% 39ms 8.57% VecXDot_Seq_Private.constprop.0 0 0% 63.74% 33ms 7.25% CxxTest::RealWorldDescription::setUp 0 0% 63.74% 33ms 7.25% PMPI_Init_thread 0 0% 63.74% 33ms 7.25% PetscInitialize 0 0% 63.74% 33ms 7.25% PetscSetup::setUpWorld 0 0% 63.74% 33ms 7.25% PetscSetupUtils::CommonSetup 0 0% 63.74% 33ms 7.25% PetscSetupUtils::InitialisePetsc 0 0% 63.74% 33ms 7.25% ompi_mpi_init 0 0% 63.74% 27ms 5.93% AbstractCardiacTissue::SolveCellSystems 0 0% 63.74% 26ms 5.71% 0 0% 63.74% 26ms 5.71% MatNullSpaceRemove 0 0% 63.74% 24ms 5.27% orte_init 0 0% 63.74% 17ms 3.74% VecAYPX 17ms 3.74% 67.47% 17ms 3.74% VecAYPX_Seq 0 0% 67.47% 15ms 3.30% AbstractCardiacCell::ComputeExceptVoltage 1ms 0.22% 67.69% 15ms 3.30% __GI__dl_catch_exception 0 0% 67.69% 15ms 3.30% _dl_catch_error 0 0% 67.69% 15ms 3.30% _dlerror_run 0 0% 67.69% 15ms 3.30% hwloc_topology_load 0 0% 67.69% 14ms 3.08% KSP_PCApply (partial-inline) 2ms 0.44% 68.13% 14ms 3.08% VecMAXPY 0 0% 68.13% 14ms 3.08% hwloc_linux_get_tid_last_cpu_location 0 0% 68.13% 14ms 3.08% mca_base_framework_components_register 0 0% 68.13% 14ms 3.08% mca_base_framework_open 0 0% 68.13% 14ms 3.08% mca_base_framework_register 0 0% 68.13% 13ms 2.86% VecDuplicate 0 0% 68.13% 13ms 2.86% VecDuplicate_Seq 0 0% 68.13% 13ms 2.86% ___dlopen 0 0% 68.13% 13ms 2.86% _dl_open 0 0% 68.13% 13ms 2.86% dlopen_doit 0 0% 68.13% 13ms 2.86% dlopen_implementation (inline) 0 0% 68.13% 13ms 2.86% opal_stackframe_output 1ms 0.22% 68.35% 12ms 2.64% AbstractOneStepIvpOdeSolver::InternalSolve 11ms 2.42% 70.77% 12ms 2.64% VecMAXPY_Seq 0 0% 70.77% 12ms 2.64% VecMDot 12ms 2.64% 73.41% 12ms 2.64% VecMDot_Seq 0 0% 73.41% 12ms 2.64% VecMXDot_Private 0 0% 73.41% 12ms 2.64% dl_open_worker 0 0% 73.41% 12ms 2.64% dl_open_worker_begin 0 0% 73.41% 11ms 2.42% AbstractCardiacTissue::UpdateCaches (inline) 4ms 0.88% 74.29% 11ms 2.42% CellLuoRudy1991FromCellML::EvaluateYDerivatives 6ms 1.32% 75.60% 11ms 2.42% CellLuoRudy1991FromCellML::GetIIonic 0 0% 75.60% 11ms 2.42% EulerIvpOdeSolver::CalculateNextYValue 0 0% 75.60% 11ms 2.42% VecNorm 0 0% 75.60% 11ms 2.42% VecNorm_Seq 6ms 1.32% 76.92% 11ms 2.42% __GI___exp 0 0% 76.92% 11ms 2.42% mca_base_component_find 0 0% 76.92% 11ms 2.42% mca_base_component_repository_open 0 0% 76.92% 10ms 2.20% PetscMemcpy (inline) 0 0% 76.92% 9ms 1.98% _dl_map_object 1ms 0.22% 77.14% 8ms 1.76% VecSetType 7ms 1.54% 78.68% 7ms 1.54% __memcpy_avx_unaligned_erms 0 0% 78.68% 7ms 1.54% _dl_init 0 0% 78.68% 7ms 1.54% _dl_start_user 0 0% 78.68% 7ms 1.54% call_init (inline) 0 0% 78.68% 6ms 1.32% VecCreate_Seq 6ms 1.32% 80.00% 6ms 1.32% __GI___libc_read 1ms 0.22% 80.22% 6ms 1.32% boost::serialization::singleton::get_instance 0 0% 80.22% 6ms 1.32% opal_hwloc_base_get_topology 0 0% 80.22% 6ms 1.32% orte_ess_base_proc_binding 0 0% 80.22% 5ms 1.10% PetscMallocA 0 0% 80.22% 5ms 1.10% PetscMallocAlign (partial-inline) 0 0% 80.22% 5ms 1.10% VecAXPY 0 0% 80.22% 5ms 1.10% VecAXPY_Seq 1ms 0.22% 80.44% 5ms 1.10% VecCreate 5ms 1.10% 81.54% 5ms 1.10% __ieee754_exp_fma 5ms 1.10% 82.64% 5ms 1.10% daxpy_ 0 0% 82.64% 4ms 0.88% CxxTest::RealWorldDescription::tearDown 0 0% 82.64% 4ms 0.88% PetscFinalize 0 0% 82.64% 4ms 0.88% PetscSetup::tearDownWorld 0 0% 82.64% 4ms 0.88% PetscSetupUtils::CommonFinalize 3ms 0.66% 83.30% 4ms 0.88% VecCreate_Seq_Private (partial-inline) 0 0% 83.30% 4ms 0.88% VecDestroy 0 0% 83.30% 4ms 0.88% _dl_map_object_deps 1ms 0.22% 83.52% 4ms 0.88% _dl_runtime_resolve_xsavec 0 0% 83.52% 4ms 0.88% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 4ms 0.88% 84.40% 4ms 0.88% strcmp 0 0% 84.40% 3ms 0.66% AbstractCardiacProblem::Initialise 0 0% 84.40% 3ms 0.66% BidomainSolver::SetupLinearSystem 0 0% 84.40% 3ms 0.66% DistributedTetrahedralMesh::ConstructFromMeshReader 2ms 0.44% 84.84% 3ms 0.66% KSPSetUp 0 0% 84.84% 3ms 0.66% PetscHeaderDestroy_Private 0 0% 84.84% 3ms 0.66% PetscMemzero (inline) 0 0% 84.84% 3ms 0.66% ProgressReporter::Update 0 0% 84.84% 3ms 0.66% VecCopy 0 0% 84.84% 3ms 0.66% VecCopy_Seq (partial-inline) 0 0% 84.84% 3ms 0.66% XOpenDisplay 0 0% 84.84% 3ms 0.66% [hwloc_gl.so] 0 0% 84.84% 3ms 0.66% _XConnectXCB 0 0% 84.84% 3ms 0.66% __GI___libc_free 1ms 0.22% 85.05% 3ms 0.66% __GI___libc_malloc 3ms 0.66% 85.71% 3ms 0.66% __GI___libc_write 0 0% 85.71% 3ms 0.66% __GI_exit 0 0% 85.71% 3ms 0.66% __cxa_finalize 3ms 0.66% 86.37% 3ms 0.66% __memset_avx2_unaligned_erms 0 0% 86.37% 3ms 0.66% __posix_memalign 0 0% 86.37% 3ms 0.66% __run_exit_handlers 0 0% 86.37% 3ms 0.66% _dl_call_fini 0 0% 86.37% 3ms 0.66% _dl_fini 1ms 0.22% 86.59% 3ms 0.66% _dl_fixup 0 0% 86.59% 3ms 0.66% _dl_lookup_symbol_x 0 0% 86.59% 3ms 0.66% _dl_map_object_from_fd 0 0% 86.59% 3ms 0.66% _dl_name_match_p 2ms 0.44% 87.03% 3ms 0.66% _int_free 0 0% 87.03% 3ms 0.66% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 87.03% 3ms 0.66% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 87.03% 3ms 0.66% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 2ms 0.44% 87.47% 3ms 0.66% malloc_consolidate 0 0% 87.47% 3ms 0.66% ompi_mpi_finalize 0 0% 87.47% 3ms 0.66% openaux 0 0% 87.47% 3ms 0.66% std::__basic_file::xsputn 0 0% 87.47% 3ms 0.66% std::basic_filebuf::_M_convert_to_external 0 0% 87.47% 3ms 0.66% std::basic_filebuf::overflow 0 0% 87.47% 3ms 0.66% std::basic_filebuf::sync 0 0% 87.47% 3ms 0.66% std::endl (inline) 0 0% 87.47% 3ms 0.66% std::flush (inline) 0 0% 87.47% 3ms 0.66% std::ostream::flush 0 0% 87.47% 3ms 0.66% std::ostream::operator<< (inline) 0 0% 87.47% 3ms 0.66% xcb_connect_to_display_with_auth_info