File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 110148ms, 91.78% of 120014ms total Dropped 1125 nodes (cum <= 600.07ms) flat flat% sum% cum cum% 0 0% 0% 119998ms 100% __libc_start_call_main 0 0% 0% 119998ms 100% __libc_start_main_impl 0 0% 0% 119998ms 100% _start 0 0% 0% 119995ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 119995ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 119995ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 119995ms 100% main 0 0% 0% 119958ms 100% AbstractConvergenceTester::Converge 0 0% 0% 119958ms 100% CxxTest::RealTestDescription::run 0 0% 0% 119958ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 119958ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 119958ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 119958ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 3ms 0.0025% 0.0025% 118724ms 98.93% AbstractCardiacProblem::Solve 7ms 0.0058% 0.0083% 117946ms 98.28% AbstractDynamicLinearPdeSolver::Solve 9ms 0.0075% 0.016% 66315ms 55.26% LinearSystem::Solve 0 0% 0.016% 65858ms 54.88% KSPSolve 13ms 0.011% 0.027% 65858ms 54.88% KSPSolve_Private 21ms 0.017% 0.044% 65465ms 54.55% KSPSolve_SYMMLQ 188ms 0.16% 0.2% 42764ms 35.63% AbstractCardiacTissue::SolveCellSystems 2ms 0.0017% 0.2% 37273ms 31.06% PCApply 5ms 0.0042% 0.21% 37261ms 31.05% PCApply_BJacobi_Singleblock 1ms 0.00083% 0.21% 34602ms 28.83% KSPSolve_PREONLY (partial-inline) 2ms 0.0017% 0.21% 33559ms 27.96% PCApply_ICC 7ms 0.0058% 0.21% 33557ms 27.96% MatSolve 33002ms 27.50% 27.71% 33550ms 27.96% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1360ms 1.13% 28.85% 32740ms 27.28% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 1ms 0.00083% 28.85% 32150ms 26.79% KSP_PCApply.lto_priv.18 7030ms 5.86% 34.71% 28388ms 23.65% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 6ms 0.005% 34.71% 22289ms 18.57% MatMult 6ms 0.005% 34.72% 22283ms 18.57% MatMult_SeqAIJ 21791ms 18.16% 52.87% 22283ms 18.57% MatMult_SeqAIJ_Inode (inline) 1916ms 1.60% 54.47% 14583ms 12.15% CardiacNewtonSolver::Solve 332ms 0.28% 54.75% 9206ms 7.67% AbstractCardiacTissue::UpdateCaches (inline) 2094ms 1.74% 56.49% 8688ms 7.24% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 4422ms 3.68% 60.17% 8544ms 7.12% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1063ms 0.89% 61.06% 7798ms 6.50% BidomainSolver::SetupLinearSystem 1045ms 0.87% 61.93% 7360ms 6.13% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 1ms 0.00083% 61.93% 7071ms 5.89% KSP_PCApply (partial-inline) 6ms 0.005% 61.94% 6524ms 5.44% KSPConvergedDefault 6062ms 5.05% 66.99% 6062ms 5.05% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3832ms 3.19% 70.18% 3874ms 3.23% __ieee754_log_fma 0 0% 70.18% 3710ms 3.09% boost::numeric::ublas::norm_inf (inline) 2492ms 2.08% 72.26% 3710ms 3.09% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 72.26% 3710ms 3.09% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 72.26% 3710ms 3.09% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 5ms 0.0042% 72.26% 3316ms 2.76% MatNullSpaceRemove 3257ms 2.71% 74.98% 3257ms 2.71% __memcpy_avx_unaligned_erms 0 0% 74.98% 3223ms 2.69% PetscMemcpy (inline) 25ms 0.021% 75.00% 3220ms 2.68% std::pow (inline) 367ms 0.31% 75.30% 3190ms 2.66% __pow 1743ms 1.45% 76.75% 2812ms 2.34% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 390ms 0.32% 77.08% 2810ms 2.34% __ieee754_pow_fma 2711ms 2.26% 79.34% 2711ms 2.26% ddot_ 20ms 0.017% 79.35% 2708ms 2.26% VecCopy 4ms 0.0033% 79.36% 2686ms 2.24% VecCopy_Seq (partial-inline) 17ms 0.014% 79.37% 2526ms 2.10% VecAXPY 8ms 0.0067% 79.38% 2509ms 2.09% VecAXPY_Seq 2488ms 2.07% 81.45% 2488ms 2.07% daxpy_ 7ms 0.0058% 81.46% 2212ms 1.84% VecDot 0 0% 81.46% 2205ms 1.84% VecDot_Seq 4ms 0.0033% 81.46% 2205ms 1.84% VecXDot_Seq_Private.constprop.0 3ms 0.0025% 81.46% 2068ms 1.72% AbstractFeVolumeIntegralAssembler::DoAssemble 1ms 0.00083% 81.46% 1915ms 1.60% VecMDot 13ms 0.011% 81.48% 1914ms 1.59% VecMXDot_Private 1888ms 1.57% 83.05% 1897ms 1.58% VecMDot_Seq 28ms 0.023% 83.07% 1739ms 1.45% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1589ms 1.32% 84.40% 1660ms 1.38% exp_inline (inline) 1497ms 1.25% 85.64% 1497ms 1.25% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 0 0% 85.64% 1413ms 1.18% AbstractFeAssemblerInterface::AssembleMatrix (inline) 6ms 0.005% 85.65% 1396ms 1.16% VecMAXPY 1385ms 1.15% 86.80% 1390ms 1.16% VecMAXPY_Seq 1166ms 0.97% 87.77% 1166ms 0.97% __memset_avx2_unaligned_erms 0 0% 87.77% 1158ms 0.96% PetscMemzero (inline) 9ms 0.0075% 87.78% 1146ms 0.95% boost::numeric::ublas::matrix_assign (inline) 206ms 0.17% 87.95% 1134ms 0.94% boost::numeric::ublas::indexing_matrix_assign 0 0% 87.95% 1129ms 0.94% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 87.95% 1129ms 0.94% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 87.95% 1129ms 0.94% boost_numeric_ublas_abs (inline) 1129ms 0.94% 88.89% 1129ms 0.94% std::abs (inline) 0 0% 88.89% 1088ms 0.91% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 88.89% 1088ms 0.91% CuboidMeshConstructor::Construct 2ms 0.0017% 88.90% 1088ms 0.91% DistributedTetrahedralMesh::ConstructCuboid 2ms 0.0017% 88.90% 1081ms 0.9% KSP_RemoveNullSpace (inline) 766ms 0.64% 89.54% 1024ms 0.85% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 4ms 0.0033% 89.54% 993ms 0.83% Element::Element 4ms 0.0033% 89.54% 975ms 0.81% AbstractTetrahedralElement::CalculateJacobian 3ms 0.0025% 89.54% 937ms 0.78% VecDuplicate 3ms 0.0025% 89.55% 926ms 0.77% AbstractTetrahedralElement::AbstractTetrahedralElement 8ms 0.0067% 89.55% 896ms 0.75% boost::numeric::ublas::c_matrix::c_matrix (inline) 6ms 0.005% 89.56% 879ms 0.73% BidomainAssembler::ComputeMatrixTerm 856ms 0.71% 90.27% 856ms 0.71% [libchaste_heart.so] 14ms 0.012% 90.28% 844ms 0.7% VecScale 3ms 0.0025% 90.29% 830ms 0.69% VecScale_Seq 827ms 0.69% 90.98% 827ms 0.69% dscal_ 15ms 0.012% 90.99% 777ms 0.65% PetscMallocA 3ms 0.0025% 90.99% 766ms 0.64% AbstractBidomainSolver::FinaliseLinearSystem 2ms 0.0017% 90.99% 762ms 0.63% PetscMallocAlign (partial-inline) 222ms 0.18% 91.18% 761ms 0.63% AbstractBidomainSolver::CheckCompatibilityCondition 5ms 0.0042% 91.18% 747ms 0.62% VecNorm 0 0% 91.18% 733ms 0.61% VecNorm_Seq 2ms 0.0017% 91.18% 717ms 0.6% BidomainProblem::WriteOneStep 716ms 0.6% 91.78% 716ms 0.6% log_inline (inline) 0 0% 91.78% 655ms 0.55% AbstractFeAssemblerInterface::Assemble (inline)