File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12776ms, 86.02% of 14852ms total Dropped 724 nodes (cum <= 74.26ms) flat flat% sum% cum cum% 0 0% 0% 14845ms 100% __libc_start_call_main 0 0% 0% 14845ms 100% __libc_start_main_impl 0 0% 0% 14845ms 100% _start 0 0% 0% 14842ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14842ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14842ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14842ms 99.93% main 0 0% 0% 14806ms 99.69% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14806ms 99.69% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14806ms 99.69% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 3ms 0.02% 0.02% 14785ms 99.55% AbstractCardiacProblem::Solve 1ms 0.0067% 0.027% 11425ms 76.93% AbstractDynamicLinearPdeSolver::Solve 33ms 0.22% 0.25% 9174ms 61.77% AbstractCardiacTissue::SolveCellSystems 168ms 1.13% 1.38% 5720ms 38.51% AbstractCardiacCell::ComputeExceptVoltage 186ms 1.25% 2.63% 4897ms 32.97% AbstractOneStepIvpOdeSolver::InternalSolve 194ms 1.31% 3.94% 4159ms 28.00% EulerIvpOdeSolver::CalculateNextYValue 880ms 5.93% 9.86% 3900ms 26.26% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1696ms 11.42% 21.28% 3520ms 23.70% __GI___exp 2ms 0.013% 21.30% 3298ms 22.21% MonodomainProblem::WriteOneStep 4ms 0.027% 21.32% 3181ms 21.42% Hdf5DataWriter::PutVector 0 0% 21.32% 3138ms 21.13% H5Dwrite 2ms 0.013% 21.34% 3112ms 20.95% H5D__write 97ms 0.65% 21.99% 2632ms 17.72% AbstractCardiacTissue::UpdateCaches (inline) 831ms 5.60% 27.59% 2495ms 16.80% CellLuoRudy1991FromCellML::GetIIonic 1ms 0.0067% 27.59% 1857ms 12.50% H5D__chunk_collective_write 12ms 0.081% 27.67% 1856ms 12.50% H5F_set_coll_metadata_reads 1607ms 10.82% 38.49% 1759ms 11.84% __ieee754_exp_fma 16ms 0.11% 38.60% 1637ms 11.02% H5FD_s3comms_uriencode 3ms 0.02% 38.62% 1527ms 10.28% LinearSystem::Solve 0 0% 38.62% 1375ms 9.26% KSPSolve 1ms 0.0067% 38.63% 1375ms 9.26% KSPSolve_Private 5ms 0.034% 38.66% 1359ms 9.15% KSPSolve_CG 41ms 0.28% 38.94% 1230ms 8.28% 0 0% 38.94% 1227ms 8.26% H5FD_write 0 0% 38.94% 1227ms 8.26% H5F__accum_write 0 0% 38.94% 1227ms 8.26% H5F_block_write 0 0% 38.94% 1227ms 8.26% H5PB_write 4ms 0.027% 38.96% 1164ms 7.84% H5D__chunk_cacheable 2ms 0.013% 38.98% 1155ms 7.78% H5D__mpio_select_write 1ms 0.0067% 38.98% 1045ms 7.04% PMPI_File_write_at_all 1021ms 6.87% 45.86% 1023ms 6.89% __GI_pwritev64 399ms 2.69% 48.55% 1013ms 6.82% H5S_select_iterate 5ms 0.034% 48.58% 927ms 6.24% std::pow (inline) 87ms 0.59% 49.17% 922ms 6.21% __pow 111ms 0.75% 49.91% 831ms 5.60% __ieee754_pow_fma 298ms 2.01% 51.92% 704ms 4.74% MonodomainSolver::SetupLinearSystem 1ms 0.0067% 51.93% 656ms 4.42% PCApply 1ms 0.0067% 51.93% 653ms 4.40% PCApply_BJacobi_Singleblock 1ms 0.0067% 51.94% 651ms 4.38% MatMult 649ms 4.37% 56.31% 650ms 4.38% MatMult_SeqAIJ 296ms 1.99% 58.30% 643ms 4.33% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 58.30% 630ms 4.24% KSPSolve_PREONLY 57ms 0.38% 58.69% 627ms 4.22% H5D__chunk_set_sizes 2ms 0.013% 58.70% 625ms 4.21% PCApply_ICC 0 0% 58.70% 623ms 4.19% MatSolve 612ms 4.12% 62.82% 623ms 4.19% MatSolve_SeqSBAIJ_1_NaturalOrdering 0 0% 62.82% 505ms 3.40% KSP_PCApply.lto_priv.7 53ms 0.36% 63.18% 491ms 3.31% H5S_mpio_space_type 389ms 2.62% 65.80% 389ms 2.62% log_inline (inline) 297ms 2.00% 67.80% 298ms 2.01% exp_inline (inline) 126ms 0.85% 68.64% 250ms 1.68% TimeStepper::TimeStepper 56ms 0.38% 69.02% 233ms 1.57% __GI___libc_malloc 5ms 0.034% 69.05% 221ms 1.49% KSPConvergedDefault 163ms 1.10% 70.15% 207ms 1.39% _int_malloc 102ms 0.69% 70.84% 185ms 1.25% top12 (inline) 124ms 0.83% 71.67% 184ms 1.24% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 10ms 0.067% 71.74% 183ms 1.23% ompi_datatype_create 11ms 0.074% 71.82% 178ms 1.20% H5VM_chunk_index 171ms 1.15% 72.97% 171ms 1.15% [libchaste_heart.so] 138ms 0.93% 73.90% 168ms 1.13% AbstractOneStepIvpOdeSolver::Solve 9ms 0.061% 73.96% 168ms 1.13% MPI_Type_free 147ms 0.99% 74.95% 166ms 1.12% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 12ms 0.081% 75.03% 166ms 1.12% ompi_datatype_destroy 166ms 1.12% 76.14% 166ms 1.12% std::isinf (inline) 29ms 0.2% 76.34% 164ms 1.10% AbstractCardiacCell::SetVoltage (partial-inline) 161ms 1.08% 77.42% 161ms 1.08% ddot_ 0 0% 77.42% 155ms 1.04% KSP_PCApply 23ms 0.15% 77.58% 153ms 1.03% __GI___libc_free 31ms 0.21% 77.79% 152ms 1.02% H5S_set_version 12ms 0.081% 77.87% 139ms 0.94% ompi_info_register_framework_params 38ms 0.26% 78.12% 136ms 0.92% ompi_datatype_release_args 53ms 0.36% 78.48% 130ms 0.88% _int_free 40ms 0.27% 78.75% 121ms 0.81% H5VM_array_calc 121ms 0.81% 79.57% 121ms 0.81% __ieee754_log_fma 2ms 0.013% 79.58% 120ms 0.81% PMPI_File_set_view 120ms 0.81% 80.39% 120ms 0.81% __memcpy_avx_unaligned_erms 2ms 0.013% 80.40% 118ms 0.79% PMPI_Type_create_resized 0 0% 80.40% 116ms 0.78% VecDuplicate 4ms 0.027% 80.43% 116ms 0.78% VecDuplicate_MPI 0 0% 80.43% 115ms 0.77% Hdf5DataWriter::PutUnlimitedVariable 59ms 0.4% 80.82% 114ms 0.77% H5S_hyper_add_span_element 114ms 0.77% 81.59% 114ms 0.77% TimeStepper::CalculateNextTime 2ms 0.013% 81.61% 106ms 0.71% VecTDot 4ms 0.027% 81.63% 105ms 0.71% VecNorm 0 0% 81.63% 103ms 0.69% VecTDot_Seq 2ms 0.013% 81.65% 103ms 0.69% VecXDot_Seq_Private.constprop.0 3ms 0.02% 81.67% 103ms 0.69% ompi_datatype_duplicate 96ms 0.65% 82.31% 101ms 0.68% AbstractParameterisedSystem::SetAnyVariable 42ms 0.28% 82.59% 96ms 0.65% std::__cxx11::basic_string::basic_string 31ms 0.21% 82.80% 95ms 0.64% ompi_datatype_set_args 3ms 0.02% 82.82% 93ms 0.63% VecNorm_Seq 86ms 0.58% 83.40% 86ms 0.58% H5VM_array_offset_pre 84ms 0.57% 83.97% 84ms 0.57% asuint64 (inline) 82ms 0.55% 84.52% 82ms 0.55% H5VM_chunk_index_scaled 27ms 0.18% 84.70% 82ms 0.55% __libc_calloc 5ms 0.034% 84.74% 81ms 0.55% opal_datatype_create_desc 9ms 0.061% 84.80% 81ms 0.55% std::vector::_M_assign_aux (inline) 0 0% 84.80% 81ms 0.55% std::vector::assign (inline) 4ms 0.027% 84.82% 80ms 0.54% MPI_Type_create_hindexed 1ms 0.0067% 84.83% 79ms 0.53% MPI_Type_contiguous 54ms 0.36% 85.19% 78ms 0.53% TimeStepper::AdvanceOneTimeStep 46ms 0.31% 85.50% 77ms 0.52% H5SL_search 77ms 0.52% 86.02% 77ms 0.52% std::vector::operator[] (inline)