File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 410ms, 87.79% of 467ms total Dropped 203 nodes (cum <= 2.33ms) flat flat% sum% cum cum% 0 0% 0% 458ms 98.07% __libc_start_call_main 0 0% 0% 458ms 98.07% __libc_start_main_impl 0 0% 0% 458ms 98.07% _start 0 0% 0% 455ms 97.43% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 455ms 97.43% CxxTest::TestRunner::runAllTests 0 0% 0% 455ms 97.43% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 455ms 97.43% main 0 0% 0% 413ms 88.44% CxxTest::RealTestDescription::run 0 0% 0% 413ms 88.44% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 413ms 88.44% CxxTest::TestRunner::runTest (inline) 0 0% 0% 413ms 88.44% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 413ms 88.44% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 408ms 87.37% AbstractCardiacProblem::Solve 0 0% 0% 403ms 86.30% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 361ms 77.30% LinearSystem::Solve 0 0% 0% 360ms 77.09% KSPSolve 0 0% 0% 360ms 77.09% KSPSolve_Private 0 0% 0% 359ms 76.87% KSPSolve_CG 0 0% 0% 203ms 43.47% KSP_PCApply.lto_priv.7 0 0% 0% 194ms 41.54% PCApply 1ms 0.21% 0.21% 194ms 41.54% PCApply_BJacobi_Singleblock 0 0% 0.21% 164ms 35.12% KSPSolve_PREONLY (partial-inline) 0 0% 0.21% 148ms 31.69% MatSolve 144ms 30.84% 31.05% 148ms 31.69% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 31.05% 148ms 31.69% PCApply_ICC 0 0% 31.05% 100ms 21.41% MatMult 5ms 1.07% 32.12% 100ms 21.41% MatMult_SeqAIJ (partial-inline) 95ms 20.34% 52.46% 100ms 21.41% MatMult_SeqAIJ_Inode (inline) 40ms 8.57% 61.03% 40ms 8.57% ddot_ 0 0% 61.03% 38ms 8.14% CxxTest::RealWorldDescription::setUp 0 0% 61.03% 38ms 8.14% PMPI_Init_thread 0 0% 61.03% 38ms 8.14% PetscInitialize 0 0% 61.03% 38ms 8.14% PetscSetup::setUpWorld 0 0% 61.03% 38ms 8.14% PetscSetupUtils::CommonSetup 0 0% 61.03% 38ms 8.14% PetscSetupUtils::InitialisePetsc 0 0% 61.03% 38ms 8.14% ompi_mpi_init 0 0% 61.03% 36ms 7.71% AbstractCardiacTissue::SolveCellSystems 0 0% 61.03% 35ms 7.49% MatNullSpaceRemove 0 0% 61.03% 33ms 7.07% VecTDot 0 0% 61.03% 33ms 7.07% VecTDot_Seq 1ms 0.21% 61.24% 33ms 7.07% VecXDot_Seq_Private.constprop.0 1ms 0.21% 61.46% 29ms 6.21% 0 0% 61.46% 27ms 5.78% orte_init 0 0% 61.46% 21ms 4.50% VecMDot 21ms 4.50% 65.95% 21ms 4.50% VecMDot_Seq 0 0% 65.95% 21ms 4.50% VecMXDot_Private 0 0% 65.95% 17ms 3.64% hwloc_topology_load 2ms 0.43% 66.38% 16ms 3.43% AbstractCardiacCell::ComputeExceptVoltage 0 0% 66.38% 16ms 3.43% __GI__dl_catch_exception 0 0% 66.38% 16ms 3.43% _dl_catch_error 0 0% 66.38% 16ms 3.43% _dlerror_run 7ms 1.50% 67.88% 15ms 3.21% __GI___exp 1ms 0.21% 68.09% 15ms 3.21% hwloc_linux_get_tid_last_cpu_location 0 0% 68.09% 14ms 3.00% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 68.09% 14ms 3.00% KSP_PCApply (inline) 0 0% 68.09% 14ms 3.00% VecMAXPY 14ms 3.00% 71.09% 14ms 3.00% VecMAXPY_Seq 0 0% 71.09% 14ms 3.00% mca_base_framework_open 0 0% 71.09% 14ms 3.00% opal_stackframe_output 0 0% 71.09% 13ms 2.78% AbstractCardiacTissue::UpdateCaches (inline) 1ms 0.21% 71.31% 13ms 2.78% CellLuoRudy1991FromCellML::EvaluateYDerivatives 5ms 1.07% 72.38% 13ms 2.78% CellLuoRudy1991FromCellML::GetIIonic 0 0% 72.38% 13ms 2.78% EulerIvpOdeSolver::CalculateNextYValue 0 0% 72.38% 13ms 2.78% VecAYPX 13ms 2.78% 75.16% 13ms 2.78% VecAYPX_Seq 0 0% 75.16% 13ms 2.78% ___dlopen 0 0% 75.16% 13ms 2.78% _dl_open 0 0% 75.16% 13ms 2.78% dl_open_worker 0 0% 75.16% 13ms 2.78% dlopen_doit 0 0% 75.16% 13ms 2.78% dlopen_implementation (inline) 0 0% 75.16% 13ms 2.78% mca_base_framework_components_register 0 0% 75.16% 13ms 2.78% mca_base_framework_register 0 0% 75.16% 12ms 2.57% dl_open_worker_begin 0 0% 75.16% 11ms 2.36% mca_base_component_find 0 0% 75.16% 11ms 2.36% mca_base_component_repository_open 0 0% 75.16% 10ms 2.14% _dl_init 0 0% 75.16% 10ms 2.14% call_init (inline) 0 0% 75.16% 9ms 1.93% VecDuplicate 0 0% 75.16% 9ms 1.93% VecDuplicate_Seq 0 0% 75.16% 9ms 1.93% _dl_start_user 0 0% 75.16% 8ms 1.71% VecNorm 0 0% 75.16% 8ms 1.71% VecNorm_Seq 1ms 0.21% 75.37% 8ms 1.71% _dl_map_object 5ms 1.07% 76.45% 7ms 1.50% __ieee754_exp_fma 0 0% 76.45% 7ms 1.50% opal_hwloc_base_get_topology 0 0% 76.45% 7ms 1.50% orte_ess_base_proc_binding 2ms 0.43% 76.87% 6ms 1.28% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 76.87% 6ms 1.28% PetscMemcpy (inline) 6ms 1.28% 78.16% 6ms 1.28% __memcpy_avx_unaligned_erms 1ms 0.21% 78.37% 5ms 1.07% __ieee754_pow_fma 0 0% 78.37% 5ms 1.07% __pow 0 0% 78.37% 5ms 1.07% _dl_lookup_symbol_x 1ms 0.21% 78.59% 5ms 1.07% _dl_runtime_resolve_xsavec 1ms 0.21% 78.80% 5ms 1.07% boost::serialization::singleton::get_instance 0 0% 78.80% 5ms 1.07% std::pow (inline) 0 0% 78.80% 4ms 0.86% AbstractCardiacProblem::Initialise 2ms 0.43% 79.23% 4ms 0.86% BidomainSolver::SetupLinearSystem 0 0% 79.23% 4ms 0.86% CxxTest::RealWorldDescription::tearDown 0 0% 79.23% 4ms 0.86% PetscFinalize 0 0% 79.23% 4ms 0.86% PetscMallocA 0 0% 79.23% 4ms 0.86% PetscMallocAlign (partial-inline) 0 0% 79.23% 4ms 0.86% PetscSetup::tearDownWorld 0 0% 79.23% 4ms 0.86% PetscSetupUtils::CommonFinalize 0 0% 79.23% 4ms 0.86% VecCreate 0 0% 79.23% 4ms 0.86% VecCreate_Seq 0 0% 79.23% 4ms 0.86% VecSetType 1ms 0.21% 79.44% 4ms 0.86% __GI___libc_malloc 4ms 0.86% 80.30% 4ms 0.86% __GI___libc_read 4ms 0.86% 81.16% 4ms 0.86% __libc_openat64 1ms 0.21% 81.37% 4ms 0.86% _dl_fixup 1ms 0.21% 81.58% 4ms 0.86% _dl_map_object_from_fd 4ms 0.86% 82.44% 4ms 0.86% _int_malloc 0 0% 82.44% 4ms 0.86% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 4ms 0.86% 83.30% 4ms 0.86% do_lookup_x 4ms 0.86% 84.15% 4ms 0.86% exp_inline (inline) 0 0% 84.15% 3ms 0.64% PetscMemzero (inline) 0 0% 84.15% 3ms 0.64% ProgressReporter::Update 1ms 0.21% 84.37% 3ms 0.64% TrianglesMeshReader::GetNextItemFromStream 0 0% 84.37% 3ms 0.64% VecDestroy 0 0% 84.37% 3ms 0.64% XOpenDisplay 0 0% 84.37% 3ms 0.64% [hwloc_gl.so] 0 0% 84.37% 3ms 0.64% _XConnectXCB 1ms 0.21% 84.58% 3ms 0.64% __GI___libc_free 3ms 0.64% 85.22% 3ms 0.64% __GI___libc_write 0 0% 85.22% 3ms 0.64% __GI_exit 0 0% 85.22% 3ms 0.64% __cxa_finalize 0 0% 85.22% 3ms 0.64% __dlclose 3ms 0.64% 85.87% 3ms 0.64% __memset_avx2_unaligned_erms 3ms 0.64% 86.51% 3ms 0.64% __mmap64 0 0% 86.51% 3ms 0.64% __run_exit_handlers 3ms 0.64% 87.15% 3ms 0.64% __strlen_avx2 0 0% 87.15% 3ms 0.64% _dl_call_fini 0 0% 87.15% 3ms 0.64% _dl_close 1ms 0.21% 87.37% 3ms 0.64% _dl_close_worker (inline) 0 0% 87.37% 3ms 0.64% _dl_fini 0 0% 87.37% 3ms 0.64% _dl_map_object_deps 0 0% 87.37% 3ms 0.64% _dl_map_segments (inline) 0 0% 87.37% 3ms 0.64% _dl_open_relocate_one_object (inline) 0 0% 87.37% 3ms 0.64% _dl_relocate_object 1ms 0.21% 87.58% 3ms 0.64% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 1ms 0.21% 87.79% 3ms 0.64% boost::serialization::typeid_system::extended_type_info_typeid_0::is_equal 0 0% 87.79% 3ms 0.64% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 87.79% 3ms 0.64% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 87.79% 3ms 0.64% mca_base_component_repository_release 0 0% 87.79% 3ms 0.64% mca_base_framework_components_open 0 0% 87.79% 3ms 0.64% mca_topo_base_dist_graph_neighbors_count 0 0% 87.79% 3ms 0.64% ompi_mpi_finalize 0 0% 87.79% 3ms 0.64% openaux 0 0% 87.79% 3ms 0.64% std::__basic_file::xsputn 0 0% 87.79% 3ms 0.64% std::basic_filebuf::_M_convert_to_external 0 0% 87.79% 3ms 0.64% std::basic_filebuf::overflow 0 0% 87.79% 3ms 0.64% std::basic_filebuf::sync 0 0% 87.79% 3ms 0.64% std::endl (inline) 0 0% 87.79% 3ms 0.64% std::flush (inline) 0 0% 87.79% 3ms 0.64% std::ostream::flush 0 0% 87.79% 3ms 0.64% std::ostream::operator<< (inline) 0 0% 87.79% 3ms 0.64% xcb_connect_to_display_with_auth_info