File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12762ms, 84.94% of 15025ms total Dropped 778 nodes (cum <= 75.12ms) flat flat% sum% cum cum% 0 0% 0% 15014ms 99.93% __libc_start_call_main 0 0% 0% 15014ms 99.93% __libc_start_main_impl 0 0% 0% 15014ms 99.93% _start 0 0% 0% 15012ms 99.91% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 15012ms 99.91% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 15012ms 99.91% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 15012ms 99.91% main 0 0% 0% 14971ms 99.64% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14971ms 99.64% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14971ms 99.64% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 7ms 0.047% 0.047% 14949ms 99.49% AbstractCardiacProblem::Solve 2ms 0.013% 0.06% 11428ms 76.06% AbstractDynamicLinearPdeSolver::Solve 42ms 0.28% 0.34% 9280ms 61.76% AbstractCardiacTissue::SolveCellSystems 131ms 0.87% 1.21% 5773ms 38.42% AbstractCardiacCell::ComputeExceptVoltage 171ms 1.14% 2.35% 5017ms 33.39% AbstractOneStepIvpOdeSolver::InternalSolve 200ms 1.33% 3.68% 4252ms 28.30% EulerIvpOdeSolver::CalculateNextYValue 946ms 6.30% 9.98% 3987ms 26.54% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1761ms 11.72% 21.70% 3629ms 24.15% __GI___exp 1ms 0.0067% 21.70% 3436ms 22.87% MonodomainProblem::WriteOneStep 2ms 0.013% 21.72% 3230ms 21.50% Hdf5DataWriter::PutVector 4ms 0.027% 21.74% 3228ms 21.48% H5Dwrite 6ms 0.04% 21.78% 3191ms 21.24% H5D__write 85ms 0.57% 22.35% 2672ms 17.78% AbstractCardiacTissue::UpdateCaches (inline) 832ms 5.54% 27.89% 2538ms 16.89% CellLuoRudy1991FromCellML::GetIIonic 1629ms 10.84% 38.73% 1785ms 11.88% __ieee754_exp_fma 2ms 0.013% 38.74% 1768ms 11.77% H5D__chunk_collective_write 19ms 0.13% 38.87% 1766ms 11.75% H5F_set_coll_metadata_reads 12ms 0.08% 38.95% 1577ms 10.50% H5FD_s3comms_uriencode 3ms 0.02% 38.97% 1389ms 9.24% LinearSystem::Solve 11ms 0.073% 39.04% 1280ms 8.52% H5D__chunk_cacheable 0 0% 39.04% 1278ms 8.51% KSPSolve 2ms 0.013% 39.05% 1278ms 8.51% KSPSolve_Private 1ms 0.0067% 39.06% 1263ms 8.41% KSPSolve_CG 3ms 0.02% 39.08% 1192ms 7.93% H5F_block_write 56ms 0.37% 39.45% 1190ms 7.92% 3ms 0.02% 39.47% 1189ms 7.91% H5PB_write 3ms 0.02% 39.49% 1186ms 7.89% H5FD_write 0 0% 39.49% 1186ms 7.89% H5F__accum_write 445ms 2.96% 42.46% 1104ms 7.35% H5S_select_iterate 0 0% 42.46% 1092ms 7.27% H5D__mpio_select_write 2ms 0.013% 42.47% 993ms 6.61% PMPI_File_write_at_all 963ms 6.41% 48.88% 966ms 6.43% __GI_pwritev64 6ms 0.04% 48.92% 876ms 5.83% std::pow (inline) 89ms 0.59% 49.51% 869ms 5.78% __pow 114ms 0.76% 50.27% 780ms 5.19% __ieee754_pow_fma 289ms 1.92% 52.19% 737ms 4.91% MonodomainSolver::SetupLinearSystem 84ms 0.56% 52.75% 678ms 4.51% H5D__chunk_set_sizes 310ms 2.06% 54.82% 645ms 4.29% CellLuoRudy1991FromCellML::VerifyStateVariables 2ms 0.013% 54.83% 642ms 4.27% PCApply 1ms 0.0067% 54.84% 637ms 4.24% PCApply_BJacobi_Singleblock 1ms 0.0067% 54.84% 600ms 3.99% MatMult 597ms 3.97% 58.82% 599ms 3.99% MatMult_SeqAIJ 2ms 0.013% 58.83% 592ms 3.94% KSPSolve_PREONLY 1ms 0.0067% 58.84% 587ms 3.91% PCApply_ICC 3ms 0.02% 58.86% 586ms 3.90% MatSolve 573ms 3.81% 62.67% 583ms 3.88% MatSolve_SeqSBAIJ_1_NaturalOrdering 51ms 0.34% 63.01% 480ms 3.19% H5S_mpio_space_type 0 0% 63.01% 441ms 2.94% KSP_PCApply.lto_priv.7 378ms 2.52% 65.52% 378ms 2.52% log_inline (inline) 2ms 0.013% 65.54% 279ms 1.86% KSPConvergedDefault 139ms 0.93% 66.46% 266ms 1.77% TimeStepper::TimeStepper 251ms 1.67% 68.13% 254ms 1.69% exp_inline (inline) 51ms 0.34% 68.47% 210ms 1.40% __GI___libc_malloc 1ms 0.0067% 68.48% 205ms 1.36% Hdf5DataWriter::PutUnlimitedVariable 20ms 0.13% 68.61% 203ms 1.35% H5VM_chunk_index 1ms 0.0067% 68.62% 203ms 1.35% KSP_PCApply 162ms 1.08% 69.70% 195ms 1.30% _int_malloc 119ms 0.79% 70.49% 192ms 1.28% top12 (inline) 188ms 1.25% 71.74% 188ms 1.25% [libchaste_heart.so] 31ms 0.21% 71.95% 178ms 1.18% AbstractCardiacCell::SetVoltage (partial-inline) 7ms 0.047% 71.99% 174ms 1.16% ompi_datatype_create 32ms 0.21% 72.21% 170ms 1.13% __GI___libc_free 167ms 1.11% 73.32% 167ms 1.11% std::isinf (inline) 7ms 0.047% 73.36% 161ms 1.07% MPI_Type_free 142ms 0.95% 74.31% 160ms 1.06% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 103ms 0.69% 75.00% 159ms 1.06% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 10ms 0.067% 75.06% 158ms 1.05% ompi_datatype_destroy 120ms 0.8% 75.86% 148ms 0.99% AbstractOneStepIvpOdeSolver::Solve 142ms 0.95% 76.81% 142ms 0.95% ddot_ 19ms 0.13% 76.93% 140ms 0.93% H5S_set_version 140ms 0.93% 77.86% 140ms 0.93% TimeStepper::CalculateNextTime 138ms 0.92% 78.78% 138ms 0.92% __memcpy_avx_unaligned_erms 45ms 0.3% 79.08% 138ms 0.92% _int_free 2ms 0.013% 79.09% 135ms 0.9% ompi_info_register_framework_params 37ms 0.25% 79.34% 134ms 0.89% ompi_datatype_release_args 62ms 0.41% 79.75% 121ms 0.81% H5VM_array_calc 64ms 0.43% 80.18% 118ms 0.79% H5S_hyper_add_span_element 101ms 0.67% 80.85% 117ms 0.78% AbstractParameterisedSystem::SetAnyVariable 0 0% 80.85% 113ms 0.75% ompi_datatype_duplicate 0 0% 80.85% 107ms 0.71% PMPI_File_set_view 106ms 0.71% 81.56% 106ms 0.71% __ieee754_log_fma 3ms 0.02% 81.58% 105ms 0.7% PMPI_Type_create_resized 46ms 0.31% 81.88% 93ms 0.62% std::__cxx11::basic_string::basic_string 92ms 0.61% 82.50% 92ms 0.61% H5VM_array_offset_pre 92ms 0.61% 83.11% 92ms 0.61% H5VM_chunk_index_scaled 0 0% 83.11% 92ms 0.61% VecDuplicate 4ms 0.027% 83.13% 92ms 0.61% VecDuplicate_MPI 3ms 0.02% 83.15% 89ms 0.59% H5D__chunk_allocated 27ms 0.18% 83.33% 88ms 0.59% __libc_calloc 3ms 0.02% 83.35% 87ms 0.58% PMPI_Type_vector 0 0% 83.35% 86ms 0.57% VecNorm 0 0% 83.35% 85ms 0.57% VecTDot 2ms 0.013% 83.37% 84ms 0.56% H5D__select_write 6ms 0.04% 83.41% 84ms 0.56% std::vector::_M_assign_aux (inline) 0 0% 83.41% 84ms 0.56% std::vector::assign (inline) 83ms 0.55% 83.96% 83ms 0.55% [libm.so.6] 0 0% 83.96% 82ms 0.55% H5Dgather 0 0% 83.96% 82ms 0.55% VecTDot_Seq 2ms 0.013% 83.97% 82ms 0.55% VecXDot_Seq_Private.constprop.0 1ms 0.0067% 83.98% 81ms 0.54% H5D__contig_fill 5ms 0.033% 84.01% 81ms 0.54% H5P_create_id 0 0% 84.01% 81ms 0.54% H5Pcreate 0 0% 84.01% 80ms 0.53% VecNorm_Seq 4ms 0.027% 84.04% 79ms 0.53% H5VM_opvv 63ms 0.42% 84.46% 78ms 0.52% AbstractParameterisedSystem::GetAnyVariable 40ms 0.27% 84.73% 78ms 0.52% TimeStepper::AdvanceOneTimeStep 32ms 0.21% 84.94% 76ms 0.51% AbstractCardiacCell::GetVoltage (partial-inline)