File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 401ms, 86.42% of 464ms total Dropped 256 nodes (cum <= 2.32ms) flat flat% sum% cum cum% 0 0% 0% 455ms 98.06% __libc_start_call_main 0 0% 0% 455ms 98.06% __libc_start_main_impl 0 0% 0% 455ms 98.06% _start 0 0% 0% 452ms 97.41% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 452ms 97.41% CxxTest::TestRunner::runAllTests 0 0% 0% 452ms 97.41% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 452ms 97.41% main 0 0% 0% 410ms 88.36% CxxTest::RealTestDescription::run 0 0% 0% 410ms 88.36% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 410ms 88.36% CxxTest::TestRunner::runTest (inline) 0 0% 0% 410ms 88.36% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 410ms 88.36% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 405ms 87.28% AbstractCardiacProblem::Solve 0 0% 0% 405ms 87.28% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 367ms 79.09% LinearSystem::Solve 0 0% 0% 366ms 78.88% KSPSolve 0 0% 0% 366ms 78.88% KSPSolve_CG 0 0% 0% 366ms 78.88% KSPSolve_Private 0 0% 0% 213ms 45.91% KSP_PCApply.lto_priv.7 1ms 0.22% 0.22% 201ms 43.32% PCApply 0 0% 0.22% 200ms 43.10% PCApply_BJacobi_Singleblock 0 0% 0.22% 167ms 35.99% KSPSolve_PREONLY (partial-inline) 1ms 0.22% 0.43% 152ms 32.76% MatSolve 0 0% 0.43% 152ms 32.76% PCApply_ICC 148ms 31.90% 32.33% 151ms 32.54% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 32.33% 83ms 17.89% MatMult 12ms 2.59% 34.91% 83ms 17.89% MatMult_SeqAIJ (partial-inline) 71ms 15.30% 50.22% 83ms 17.89% MatMult_SeqAIJ_Inode (inline) 46ms 9.91% 60.13% 46ms 9.91% ddot_ 1ms 0.22% 60.34% 43ms 9.27% MatNullSpaceRemove 0 0% 60.34% 37ms 7.97% CxxTest::RealWorldDescription::setUp 0 0% 60.34% 37ms 7.97% PetscSetup::setUpWorld 0 0% 60.34% 37ms 7.97% PetscSetupUtils::CommonSetup 0 0% 60.34% 36ms 7.76% PMPI_Init_thread 0 0% 60.34% 36ms 7.76% PetscInitialize 0 0% 60.34% 36ms 7.76% PetscSetupUtils::InitialisePetsc 0 0% 60.34% 36ms 7.76% ompi_mpi_init 0 0% 60.34% 33ms 7.11% VecTDot 0 0% 60.34% 33ms 7.11% VecTDot_Seq 1ms 0.22% 60.56% 33ms 7.11% VecXDot_Seq_Private.constprop.0 1ms 0.22% 60.78% 32ms 6.90% AbstractCardiacTissue::SolveCellSystems 0 0% 60.78% 31ms 6.68% 0 0% 60.78% 24ms 5.17% orte_init 0 0% 60.78% 22ms 4.74% VecMAXPY 22ms 4.74% 65.52% 22ms 4.74% VecMAXPY_Seq 0 0% 65.52% 20ms 4.31% VecMDot 1ms 0.22% 65.73% 20ms 4.31% VecMXDot_Private 19ms 4.09% 69.83% 19ms 4.09% VecMDot_Seq 0 0% 69.83% 17ms 3.66% KSP_PCApply (partial-inline) 0 0% 69.83% 17ms 3.66% __GI__dl_catch_exception 0 0% 69.83% 17ms 3.66% _dl_catch_error 0 0% 69.83% 17ms 3.66% _dlerror_run 0 0% 69.83% 16ms 3.45% AbstractCardiacCell::ComputeExceptVoltage 0 0% 69.83% 15ms 3.23% KSP_RemoveNullSpace (inline) 0 0% 69.83% 15ms 3.23% opal_stackframe_output 0 0% 69.83% 14ms 3.02% VecNorm 0 0% 69.83% 14ms 3.02% VecNorm_Seq 0 0% 69.83% 14ms 3.02% hwloc_topology_load 1ms 0.22% 70.04% 13ms 2.80% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 70.04% 13ms 2.80% mca_base_framework_open 0 0% 70.04% 12ms 2.59% VecAXPY 0 0% 70.04% 12ms 2.59% VecAXPY_Seq 0 0% 70.04% 12ms 2.59% ___dlopen 0 0% 70.04% 12ms 2.59% _dl_open 12ms 2.59% 72.63% 12ms 2.59% daxpy_ 0 0% 72.63% 12ms 2.59% dl_open_worker 0 0% 72.63% 12ms 2.59% dl_open_worker_begin 0 0% 72.63% 12ms 2.59% dlopen_doit 0 0% 72.63% 12ms 2.59% dlopen_implementation (inline) 0 0% 72.63% 12ms 2.59% hwloc_linux_get_tid_last_cpu_location 0 0% 72.63% 11ms 2.37% mca_base_framework_components_register 0 0% 72.63% 11ms 2.37% mca_base_framework_register 0 0% 72.63% 10ms 2.16% AbstractCardiacTissue::UpdateCaches (inline) 3ms 0.65% 73.28% 10ms 2.16% CellLuoRudy1991FromCellML::EvaluateYDerivatives 4ms 0.86% 74.14% 10ms 2.16% CellLuoRudy1991FromCellML::GetIIonic 0 0% 74.14% 10ms 2.16% EulerIvpOdeSolver::CalculateNextYValue 0 0% 74.14% 10ms 2.16% VecDuplicate 5ms 1.08% 75.22% 10ms 2.16% __GI___exp 0 0% 75.22% 10ms 2.16% mca_base_component_find 0 0% 75.22% 10ms 2.16% mca_base_component_repository_open 0 0% 75.22% 9ms 1.94% VecDuplicate_Seq 1ms 0.22% 75.43% 9ms 1.94% _dl_map_object 0 0% 75.43% 8ms 1.72% _dl_init 0 0% 75.43% 8ms 1.72% _dl_start_user 2ms 0.43% 75.86% 8ms 1.72% boost::serialization::singleton::get_instance 0 0% 75.86% 8ms 1.72% call_init (inline) 0 0% 75.86% 7ms 1.51% VecAYPX 7ms 1.51% 77.37% 7ms 1.51% VecAYPX_Seq 3ms 0.65% 78.02% 7ms 1.51% VecCreate 0 0% 78.02% 7ms 1.51% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 78.02% 6ms 1.29% KSPConvergedDefault 0 0% 78.02% 6ms 1.29% _dl_map_object_deps 0 0% 78.02% 6ms 1.29% openaux 0 0% 78.02% 5ms 1.08% BidomainSolver::SetupLinearSystem 0 0% 78.02% 5ms 1.08% CxxTest::RealWorldDescription::tearDown 0 0% 78.02% 5ms 1.08% PetscFinalize 1ms 0.22% 78.23% 5ms 1.08% PetscMallocA 0 0% 78.23% 5ms 1.08% PetscSetup::tearDownWorld 0 0% 78.23% 5ms 1.08% PetscSetupUtils::CommonFinalize 0 0% 78.23% 5ms 1.08% __dlclose 5ms 1.08% 79.31% 5ms 1.08% __ieee754_exp_fma 5ms 1.08% 80.39% 5ms 1.08% __memcpy_avx_unaligned_erms 5ms 1.08% 81.47% 5ms 1.08% __strcmp_avx2 0 0% 81.47% 5ms 1.08% _dl_close 3ms 0.65% 82.11% 5ms 1.08% _dl_close_worker (inline) 0 0% 82.11% 5ms 1.08% _dl_lookup_symbol_x 4ms 0.86% 82.97% 5ms 1.08% do_lookup_x 0 0% 82.97% 5ms 1.08% ompi_mpi_finalize 0 0% 82.97% 5ms 1.08% opal_hwloc_base_get_topology 0 0% 82.97% 5ms 1.08% orte_ess_base_proc_binding 0 0% 82.97% 4ms 0.86% AbstractCardiacProblem::Initialise 2ms 0.43% 83.41% 4ms 0.86% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 83.41% 4ms 0.86% PetscMallocAlign (partial-inline) 0 0% 83.41% 4ms 0.86% PetscMemcpy (inline) 0 0% 83.41% 4ms 0.86% VecDestroy 0 0% 83.41% 4ms 0.86% XOpenDisplay 0 0% 83.41% 4ms 0.86% [hwloc_gl.so] 0 0% 83.41% 4ms 0.86% _XConnectXCB 1ms 0.22% 83.62% 4ms 0.86% __GI___libc_free 2ms 0.43% 84.05% 4ms 0.86% __GI___libc_malloc 0 0% 84.05% 4ms 0.86% _dl_fixup 3ms 0.65% 84.70% 4ms 0.86% _dl_map_object_from_fd 0 0% 84.70% 4ms 0.86% _dl_runtime_resolve_xsavec 0 0% 84.70% 4ms 0.86% mca_base_component_repository_release 0 0% 84.70% 4ms 0.86% mca_base_framework_components_open 4ms 0.86% 85.56% 4ms 0.86% strcmp 0 0% 85.56% 4ms 0.86% xcb_connect_to_display_with_auth_info 0 0% 85.56% 3ms 0.65% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 85.56% 3ms 0.65% PetscMemzero (inline) 0 0% 85.56% 3ms 0.65% [libxcb.so.1.1.0] 0 0% 85.56% 3ms 0.65% __GI_exit 0 0% 85.56% 3ms 0.65% __GI_getaddrinfo 0 0% 85.56% 3ms 0.65% __cxa_finalize 3ms 0.65% 86.21% 3ms 0.65% __memset_avx2_unaligned_erms 0 0% 86.21% 3ms 0.65% __posix_memalign 0 0% 86.21% 3ms 0.65% __run_exit_handlers 0 0% 86.21% 3ms 0.65% _dl_call_fini 0 0% 86.21% 3ms 0.65% _dl_fini 1ms 0.22% 86.42% 3ms 0.65% _int_free 0 0% 86.42% 3ms 0.65% boost::archive::detail::pointer_iserializer::pointer_iserializer (inline) 0 0% 86.42% 3ms 0.65% boost::serialization::singleton::get_const_instance (inline) 0 0% 86.42% 3ms 0.65% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 86.42% 3ms 0.65% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 86.42% 3ms 0.65% mca_base_components_close 0 0% 86.42% 3ms 0.65% mca_base_framework_close 0 0% 86.42% 3ms 0.65% mca_topo_base_dist_graph_neighbors_count