File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 114815ms, 91.89% of 124952ms total Dropped 1151 nodes (cum <= 624.76ms) flat flat% sum% cum cum% 0 0% 0% 124939ms 100% __libc_start_call_main 0 0% 0% 124939ms 100% __libc_start_main_impl 0 0% 0% 124939ms 100% _start 0 0% 0% 124936ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 124936ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 124936ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 124936ms 100% main 0 0% 0% 124901ms 100% CxxTest::RealTestDescription::run 0 0% 0% 124901ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 124901ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 124901ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 124901ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 0 0% 0% 124900ms 100% AbstractConvergenceTester::Converge 4ms 0.0032% 0.0032% 123614ms 98.93% AbstractCardiacProblem::Solve 7ms 0.0056% 0.0088% 122721ms 98.21% AbstractDynamicLinearPdeSolver::Solve 5ms 0.004% 0.013% 70603ms 56.50% LinearSystem::Solve 3ms 0.0024% 0.015% 70013ms 56.03% KSPSolve 24ms 0.019% 0.034% 70012ms 56.03% KSPSolve_Private 9ms 0.0072% 0.042% 69505ms 55.63% KSPSolve_SYMMLQ 205ms 0.16% 0.21% 42936ms 34.36% AbstractCardiacTissue::SolveCellSystems 5ms 0.004% 0.21% 38471ms 30.79% PCApply 3ms 0.0024% 0.21% 38456ms 30.78% PCApply_BJacobi_Singleblock 3ms 0.0024% 0.21% 35245ms 28.21% KSPSolve_PREONLY (partial-inline) 6ms 0.0048% 0.22% 34022ms 27.23% PCApply_ICC 6ms 0.0048% 0.22% 34016ms 27.22% MatSolve 33474ms 26.79% 27.01% 34010ms 27.22% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 2ms 0.0016% 27.02% 33366ms 26.70% KSP_PCApply.lto_priv.18 1388ms 1.11% 28.13% 33125ms 26.51% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 6936ms 5.55% 33.68% 28585ms 22.88% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 8ms 0.0064% 33.68% 24308ms 19.45% MatMult 241ms 0.19% 33.88% 24300ms 19.45% MatMult_SeqAIJ (partial-inline) 23779ms 19.03% 52.91% 24299ms 19.45% MatMult_SeqAIJ_Inode (inline) 1968ms 1.58% 54.48% 14618ms 11.70% CardiacNewtonSolver::Solve 313ms 0.25% 54.73% 8943ms 7.16% AbstractCardiacTissue::UpdateCaches (inline) 4415ms 3.53% 58.27% 8618ms 6.90% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1915ms 1.53% 59.80% 8410ms 6.73% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1087ms 0.87% 60.67% 8179ms 6.55% BidomainSolver::SetupLinearSystem 1060ms 0.85% 61.52% 7411ms 5.93% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 1ms 0.0008% 61.52% 7342ms 5.88% KSP_PCApply (partial-inline) 5ms 0.004% 61.52% 6702ms 5.36% KSPConvergedDefault 6092ms 4.88% 66.40% 6092ms 4.88% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3891ms 3.11% 69.51% 3938ms 3.15% __ieee754_log_fma 10ms 0.008% 69.52% 3830ms 3.07% MatNullSpaceRemove 0 0% 69.52% 3628ms 2.90% boost::numeric::ublas::norm_inf (inline) 2509ms 2.01% 71.53% 3628ms 2.90% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 71.53% 3628ms 2.90% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 71.53% 3628ms 2.90% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 3503ms 2.80% 74.33% 3503ms 2.80% __memcpy_avx_unaligned_erms 0 0% 74.33% 3466ms 2.77% PetscMemcpy (inline) 27ms 0.022% 74.35% 3193ms 2.56% std::pow (inline) 401ms 0.32% 74.67% 3158ms 2.53% __pow 14ms 0.011% 74.68% 3027ms 2.42% VecAXPY 10ms 0.008% 74.69% 3013ms 2.41% VecAXPY_Seq 1825ms 1.46% 76.15% 2994ms 2.40% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 2982ms 2.39% 78.54% 2982ms 2.39% daxpy_ 2969ms 2.38% 80.92% 2969ms 2.38% ddot_ 30ms 0.024% 80.94% 2968ms 2.38% VecCopy 0 0% 80.94% 2935ms 2.35% VecCopy_Seq (partial-inline) 383ms 0.31% 81.25% 2744ms 2.20% __ieee754_pow_fma 5ms 0.004% 81.25% 2454ms 1.96% VecDot 0 0% 81.25% 2449ms 1.96% VecDot_Seq 2ms 0.0016% 81.25% 2449ms 1.96% VecXDot_Seq_Private.constprop.0 4ms 0.0032% 81.25% 2290ms 1.83% VecMDot 8ms 0.0064% 81.26% 2286ms 1.83% VecMXDot_Private 2264ms 1.81% 83.07% 2270ms 1.82% VecMDot_Seq 2ms 0.0016% 83.07% 2078ms 1.66% AbstractFeVolumeIntegralAssembler::DoAssemble 29ms 0.023% 83.10% 1743ms 1.39% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1580ms 1.26% 84.36% 1636ms 1.31% exp_inline (inline) 1552ms 1.24% 85.60% 1552ms 1.24% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 2ms 0.0016% 85.61% 1530ms 1.22% VecMAXPY 1517ms 1.21% 86.82% 1528ms 1.22% VecMAXPY_Seq 1436ms 1.15% 87.97% 1436ms 1.15% __memset_avx2_unaligned_erms 0 0% 87.97% 1428ms 1.14% PetscMemzero (inline) 0 0% 87.97% 1426ms 1.14% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 87.97% 1191ms 0.95% VecDuplicate 5ms 0.004% 87.97% 1113ms 0.89% boost::numeric::ublas::matrix_assign (inline) 0 0% 87.97% 1109ms 0.89% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 87.97% 1109ms 0.89% CuboidMeshConstructor::Construct 2ms 0.0016% 87.97% 1109ms 0.89% DistributedTetrahedralMesh::ConstructCuboid 230ms 0.18% 88.16% 1099ms 0.88% boost::numeric::ublas::indexing_matrix_assign 783ms 0.63% 88.79% 1089ms 0.87% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 0 0% 88.79% 1048ms 0.84% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 88.79% 1048ms 0.84% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 88.79% 1048ms 0.84% boost_numeric_ublas_abs (inline) 1048ms 0.84% 89.62% 1048ms 0.84% std::abs (inline) 3ms 0.0024% 89.63% 1011ms 0.81% Element::Element 9ms 0.0072% 89.63% 1007ms 0.81% VecScale 4ms 0.0032% 89.64% 999ms 0.8% AbstractTetrahedralElement::CalculateJacobian 4ms 0.0032% 89.64% 998ms 0.8% VecScale_Seq 15ms 0.012% 89.65% 990ms 0.79% PetscMallocA 990ms 0.79% 90.44% 990ms 0.79% dscal_ 5ms 0.004% 90.45% 975ms 0.78% PetscMallocAlign (partial-inline) 1ms 0.0008% 90.45% 939ms 0.75% AbstractTetrahedralElement::AbstractTetrahedralElement 890ms 0.71% 91.16% 890ms 0.71% [libchaste_heart.so] 5ms 0.004% 91.17% 870ms 0.7% BidomainAssembler::ComputeMatrixTerm 7ms 0.0056% 91.17% 848ms 0.68% boost::numeric::ublas::c_matrix::c_matrix (inline) 1ms 0.0008% 91.17% 829ms 0.66% BidomainProblem::WriteOneStep 0 0% 91.17% 791ms 0.63% VecNorm 3ms 0.0024% 91.17% 784ms 0.63% VecNorm_Seq 4ms 0.0032% 91.18% 732ms 0.59% VecDuplicate_Seq 687ms 0.55% 91.73% 687ms 0.55% log_inline (inline) 1ms 0.0008% 91.73% 668ms 0.53% AbstractBidomainSolver::FinaliseLinearSystem 199ms 0.16% 91.89% 664ms 0.53% AbstractBidomainSolver::CheckCompatibilityCondition 0 0% 91.89% 652ms 0.52% AbstractFeAssemblerInterface::Assemble (inline)