File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 123887ms, 91.57% of 135286ms total Dropped 1156 nodes (cum <= 676.43ms) flat flat% sum% cum cum% 0 0% 0% 135266ms 100% __libc_start_call_main 0 0% 0% 135266ms 100% __libc_start_main_impl 0 0% 0% 135266ms 100% _start 0 0% 0% 135263ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 135263ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 135263ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 135263ms 100% main 0 0% 0% 135226ms 100% CxxTest::RealTestDescription::run 0 0% 0% 135226ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 135226ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 135226ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 135226ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 0 0% 0% 135225ms 100% AbstractConvergenceTester::Converge 5ms 0.0037% 0.0037% 134006ms 99.05% AbstractCardiacProblem::Solve 4ms 0.003% 0.0067% 133161ms 98.43% AbstractDynamicLinearPdeSolver::Solve 4ms 0.003% 0.0096% 73027ms 53.98% LinearSystem::Solve 3ms 0.0022% 0.012% 72508ms 53.60% KSPSolve 13ms 0.0096% 0.021% 72505ms 53.59% KSPSolve_Private 14ms 0.01% 0.032% 72154ms 53.33% KSPSolve_SYMMLQ 1120ms 0.83% 0.86% 50751ms 37.51% AbstractCardiacTissue::SolveCellSystems 5ms 0.0037% 0.86% 40838ms 30.19% PCApply 2ms 0.0015% 0.86% 40819ms 30.17% PCApply_BJacobi_Singleblock 1485ms 1.10% 1.96% 39291ms 29.04% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 3ms 0.0022% 1.96% 38298ms 28.31% KSPSolve_PREONLY (partial-inline) 4ms 0.003% 1.97% 37326ms 27.59% PCApply_ICC 7ms 0.0052% 1.97% 37322ms 27.59% MatSolve 36861ms 27.25% 29.22% 37315ms 27.58% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 4ms 0.003% 29.22% 35014ms 25.88% KSP_PCApply.lto_priv.18 7690ms 5.68% 34.91% 34524ms 25.52% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 11ms 0.0081% 34.91% 25184ms 18.62% MatMult 286ms 0.21% 35.13% 25173ms 18.61% MatMult_SeqAIJ (partial-inline) 24690ms 18.25% 53.38% 25172ms 18.61% MatMult_SeqAIJ_Inode (inline) 2219ms 1.64% 55.02% 17329ms 12.81% CardiacNewtonSolver::Solve 1407ms 1.04% 56.06% 11242ms 8.31% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 6005ms 4.44% 60.50% 10620ms 7.85% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 9553ms 7.06% 67.56% 9553ms 7.06% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 196ms 0.14% 67.70% 9091ms 6.72% AbstractCardiacTissue::UpdateCaches (inline) 1706ms 1.26% 68.96% 8499ms 6.28% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1217ms 0.9% 69.86% 8320ms 6.15% BidomainSolver::SetupLinearSystem 1ms 0.00074% 69.86% 7506ms 5.55% KSP_PCApply (partial-inline) 3ms 0.0022% 69.87% 7112ms 5.26% KSPConvergedDefault 4310ms 3.19% 73.05% 4401ms 3.25% __ieee754_log_fma 0 0% 73.05% 4000ms 2.96% boost::numeric::ublas::norm_inf (inline) 2692ms 1.99% 75.04% 4000ms 2.96% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 75.04% 4000ms 2.96% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 75.04% 4000ms 2.96% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 3591ms 2.65% 77.70% 3591ms 2.65% ddot_ 3ms 0.0022% 77.70% 3139ms 2.32% MatNullSpaceRemove 22ms 0.016% 77.71% 3126ms 2.31% std::pow (inline) 2015ms 1.49% 79.20% 3109ms 2.30% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 397ms 0.29% 79.50% 3096ms 2.29% __pow 9ms 0.0067% 79.50% 3077ms 2.27% VecDot 2ms 0.0015% 79.50% 3068ms 2.27% VecDot_Seq 2ms 0.0015% 79.51% 3066ms 2.27% VecXDot_Seq_Private.constprop.0 2834ms 2.09% 81.60% 2834ms 2.09% __memcpy_avx_unaligned_erms 0 0% 81.60% 2810ms 2.08% PetscMemcpy (inline) 362ms 0.27% 81.87% 2667ms 1.97% __ieee754_pow_fma 14ms 0.01% 81.88% 2554ms 1.89% VecAXPY 9ms 0.0067% 81.89% 2540ms 1.88% VecAXPY_Seq 2519ms 1.86% 83.75% 2519ms 1.86% daxpy_ 14ms 0.01% 83.76% 2382ms 1.76% VecCopy 4ms 0.003% 83.76% 2367ms 1.75% VecCopy_Seq (partial-inline) 3ms 0.0022% 83.76% 2009ms 1.49% AbstractFeVolumeIntegralAssembler::DoAssemble 3ms 0.0022% 83.77% 1982ms 1.47% VecMDot 7ms 0.0052% 83.77% 1979ms 1.46% VecMXDot_Private 1967ms 1.45% 85.22% 1969ms 1.46% VecMDot_Seq 34ms 0.025% 85.25% 1696ms 1.25% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1531ms 1.13% 86.38% 1587ms 1.17% exp_inline (inline) 0 0% 86.38% 1390ms 1.03% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 86.38% 1298ms 0.96% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 86.38% 1298ms 0.96% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 86.38% 1298ms 0.96% boost_numeric_ublas_abs (inline) 1298ms 0.96% 87.34% 1298ms 0.96% std::abs (inline) 9ms 0.0067% 87.35% 1154ms 0.85% VecMAXPY 1132ms 0.84% 88.18% 1145ms 0.85% VecMAXPY_Seq 5ms 0.0037% 88.19% 1108ms 0.82% boost::numeric::ublas::matrix_assign (inline) 235ms 0.17% 88.36% 1090ms 0.81% boost::numeric::ublas::indexing_matrix_assign 0 0% 88.36% 1045ms 0.77% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 88.36% 1045ms 0.77% CuboidMeshConstructor::Construct 4ms 0.003% 88.36% 1045ms 0.77% DistributedTetrahedralMesh::ConstructCuboid 686ms 0.51% 88.87% 1044ms 0.77% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 971ms 0.72% 89.59% 971ms 0.72% [libchaste_heart.so] 2ms 0.0015% 89.59% 925ms 0.68% AbstractTetrahedralElement::CalculateJacobian 3ms 0.0022% 89.59% 918ms 0.68% Element::Element 4ms 0.003% 89.60% 910ms 0.67% BidomainAssembler::ComputeMatrixTerm 2ms 0.0015% 89.60% 909ms 0.67% KSP_RemoveNullSpace (inline) 6ms 0.0044% 89.60% 901ms 0.67% VecScale 1ms 0.00074% 89.60% 895ms 0.66% VecScale_Seq 891ms 0.66% 90.26% 891ms 0.66% dscal_ 1ms 0.00074% 90.26% 867ms 0.64% AbstractTetrahedralElement::AbstractTetrahedralElement 13ms 0.0096% 90.27% 861ms 0.64% boost::numeric::ublas::c_matrix::c_matrix (inline) 3ms 0.0022% 90.27% 852ms 0.63% VecNorm 1ms 0.00074% 90.27% 840ms 0.62% VecNorm_Seq 838ms 0.62% 90.89% 838ms 0.62% __memset_avx2_unaligned_erms 0 0% 90.89% 824ms 0.61% PetscMemzero (inline) 1ms 0.00074% 90.89% 763ms 0.56% BidomainProblem::WriteOneStep 1ms 0.00074% 90.90% 724ms 0.54% AbstractBidomainSolver::FinaliseLinearSystem 238ms 0.18% 91.07% 720ms 0.53% AbstractBidomainSolver::CheckCompatibilityCondition 1ms 0.00074% 91.07% 720ms 0.53% VecDuplicate 679ms 0.5% 91.57% 679ms 0.5% log_inline (inline)