File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 108343ms, 91.87% of 117929ms total Dropped 1105 nodes (cum <= 589.64ms) flat flat% sum% cum cum% 0 0% 0% 117914ms 100% __libc_start_call_main 0 0% 0% 117914ms 100% __libc_start_main_impl 0 0% 0% 117914ms 100% _start 0 0% 0% 117911ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 117911ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 117911ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 117911ms 100% main 0 0% 0% 117879ms 100% CxxTest::RealTestDescription::run 0 0% 0% 117879ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 117879ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 117879ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 117879ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 0 0% 0% 117878ms 100% AbstractConvergenceTester::Converge 2ms 0.0017% 0.0017% 116648ms 98.91% AbstractCardiacProblem::Solve 9ms 0.0076% 0.0093% 115904ms 98.28% AbstractDynamicLinearPdeSolver::Solve 3ms 0.0025% 0.012% 64521ms 54.71% LinearSystem::Solve 1ms 0.00085% 0.013% 64105ms 54.36% KSPSolve 11ms 0.0093% 0.022% 64105ms 54.36% KSPSolve_Private 6ms 0.0051% 0.027% 63711ms 54.02% KSPSolve_SYMMLQ 188ms 0.16% 0.19% 42682ms 36.19% AbstractCardiacTissue::SolveCellSystems 4ms 0.0034% 0.19% 36807ms 31.21% PCApply 3ms 0.0025% 0.19% 36796ms 31.20% PCApply_BJacobi_Singleblock 1ms 0.00085% 0.19% 34469ms 29.23% KSPSolve_PREONLY (partial-inline) 2ms 0.0017% 0.2% 33316ms 28.25% PCApply_ICC 4ms 0.0034% 0.2% 33314ms 28.25% MatSolve 32768ms 27.79% 27.98% 33310ms 28.25% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1363ms 1.16% 29.14% 32627ms 27.67% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 2ms 0.0017% 29.14% 31658ms 26.84% KSP_PCApply.lto_priv.18 6953ms 5.90% 35.04% 28235ms 23.94% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 11ms 0.0093% 35.05% 21126ms 17.91% MatMult 236ms 0.2% 35.25% 21115ms 17.90% MatMult_SeqAIJ (partial-inline) 20595ms 17.46% 52.71% 21115ms 17.90% MatMult_SeqAIJ_Inode (inline) 2038ms 1.73% 54.44% 14575ms 12.36% CardiacNewtonSolver::Solve 314ms 0.27% 54.71% 9270ms 7.86% AbstractCardiacTissue::UpdateCaches (inline) 1985ms 1.68% 56.39% 8761ms 7.43% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 4338ms 3.68% 60.07% 8498ms 7.21% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1147ms 0.97% 61.04% 7688ms 6.52% BidomainSolver::SetupLinearSystem 2ms 0.0017% 61.04% 7188ms 6.10% KSP_PCApply (partial-inline) 1039ms 0.88% 61.92% 7095ms 6.02% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 4ms 0.0034% 61.93% 6529ms 5.54% KSPConvergedDefault 5786ms 4.91% 66.83% 5786ms 4.91% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3854ms 3.27% 70.10% 3887ms 3.30% __ieee754_log_fma 0 0% 70.10% 3590ms 3.04% boost::numeric::ublas::norm_inf (inline) 2431ms 2.06% 72.16% 3590ms 3.04% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 72.16% 3590ms 3.04% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 72.16% 3590ms 3.04% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 4ms 0.0034% 72.17% 3393ms 2.88% MatNullSpaceRemove 33ms 0.028% 72.19% 3270ms 2.77% std::pow (inline) 395ms 0.33% 72.53% 3236ms 2.74% __pow 3042ms 2.58% 75.11% 3042ms 2.58% __memcpy_avx_unaligned_erms 0 0% 75.11% 3003ms 2.55% PetscMemcpy (inline) 1738ms 1.47% 76.58% 2875ms 2.44% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 430ms 0.36% 76.95% 2830ms 2.40% __ieee754_pow_fma 2716ms 2.30% 79.25% 2716ms 2.30% ddot_ 14ms 0.012% 79.26% 2499ms 2.12% VecAXPY 24ms 0.02% 79.28% 2490ms 2.11% VecCopy 4ms 0.0034% 79.28% 2485ms 2.11% VecAXPY_Seq 2470ms 2.09% 81.38% 2470ms 2.09% daxpy_ 2ms 0.0017% 81.38% 2464ms 2.09% VecCopy_Seq (partial-inline) 1ms 0.00085% 81.38% 2229ms 1.89% VecDot 0 0% 81.38% 2228ms 1.89% VecDot_Seq 1ms 0.00085% 81.38% 2228ms 1.89% VecXDot_Seq_Private.constprop.0 1ms 0.00085% 81.38% 2066ms 1.75% AbstractFeVolumeIntegralAssembler::DoAssemble 1ms 0.00085% 81.38% 1951ms 1.65% VecMDot 13ms 0.011% 81.40% 1950ms 1.65% VecMXDot_Private 1926ms 1.63% 83.03% 1933ms 1.64% VecMDot_Seq 26ms 0.022% 83.05% 1714ms 1.45% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1602ms 1.36% 84.41% 1665ms 1.41% exp_inline (inline) 1641ms 1.39% 85.80% 1641ms 1.39% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 10ms 0.0085% 85.81% 1438ms 1.22% VecMAXPY 1424ms 1.21% 87.02% 1428ms 1.21% VecMAXPY_Seq 0 0% 87.02% 1417ms 1.20% AbstractFeAssemblerInterface::AssembleMatrix (inline) 918ms 0.78% 87.80% 1188ms 1.01% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 4ms 0.0034% 87.80% 1093ms 0.93% boost::numeric::ublas::matrix_assign (inline) 0 0% 87.80% 1084ms 0.92% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 87.80% 1084ms 0.92% CuboidMeshConstructor::Construct 0 0% 87.80% 1084ms 0.92% DistributedTetrahedralMesh::ConstructCuboid 202ms 0.17% 87.97% 1080ms 0.92% boost::numeric::ublas::indexing_matrix_assign 0 0% 87.97% 1073ms 0.91% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 87.97% 1073ms 0.91% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 87.97% 1073ms 0.91% boost_numeric_ublas_abs (inline) 1073ms 0.91% 88.88% 1073ms 0.91% std::abs (inline) 5ms 0.0042% 88.88% 978ms 0.83% Element::Element 1ms 0.00085% 88.88% 965ms 0.82% AbstractTetrahedralElement::CalculateJacobian 926ms 0.79% 89.67% 926ms 0.79% __memset_avx2_unaligned_erms 0 0% 89.67% 913ms 0.77% AbstractTetrahedralElement::AbstractTetrahedralElement 0 0% 89.67% 913ms 0.77% PetscMemzero (inline) 906ms 0.77% 90.44% 906ms 0.77% [libchaste_heart.so] 6ms 0.0051% 90.44% 851ms 0.72% BidomainAssembler::ComputeMatrixTerm 2ms 0.0017% 90.45% 843ms 0.71% boost::numeric::ublas::c_matrix::c_matrix (inline) 2ms 0.0017% 90.45% 771ms 0.65% VecDuplicate 3ms 0.0025% 90.45% 763ms 0.65% VecScale 4ms 0.0034% 90.45% 760ms 0.64% VecScale_Seq 754ms 0.64% 91.09% 754ms 0.64% dscal_ 1ms 0.00085% 91.09% 707ms 0.6% AbstractBidomainSolver::FinaliseLinearSystem 219ms 0.19% 91.28% 705ms 0.6% AbstractBidomainSolver::CheckCompatibilityCondition 3ms 0.0025% 91.28% 696ms 0.59% VecNorm 2ms 0.0017% 91.28% 685ms 0.58% VecNorm_Seq 1ms 0.00085% 91.28% 683ms 0.58% BidomainProblem::WriteOneStep 675ms 0.57% 91.86% 675ms 0.57% log_inline (inline) 0 0% 91.86% 649ms 0.55% AbstractFeAssemblerInterface::Assemble (inline) 10ms 0.0085% 91.86% 639ms 0.54% PetscMallocA 8ms 0.0068% 91.87% 629ms 0.53% PetscMallocAlign (partial-inline)