File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12604ms, 85.17% of 14798ms total Dropped 743 nodes (cum <= 73.99ms) flat flat% sum% cum cum% 0 0% 0% 14791ms 100% __libc_start_call_main 0 0% 0% 14791ms 100% __libc_start_main_impl 0 0% 0% 14791ms 100% _start 0 0% 0% 14788ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14788ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14788ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14788ms 99.93% main 0 0% 0% 14755ms 99.71% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14755ms 99.71% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14755ms 99.71% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 0 0% 0% 14734ms 99.57% AbstractCardiacProblem::Solve 2ms 0.014% 0.014% 11382ms 76.92% AbstractDynamicLinearPdeSolver::Solve 45ms 0.3% 0.32% 9145ms 61.80% AbstractCardiacTissue::SolveCellSystems 114ms 0.77% 1.09% 5731ms 38.73% AbstractCardiacCell::ComputeExceptVoltage 178ms 1.20% 2.29% 4987ms 33.70% AbstractOneStepIvpOdeSolver::InternalSolve 191ms 1.29% 3.58% 4208ms 28.44% EulerIvpOdeSolver::CalculateNextYValue 924ms 6.24% 9.83% 3963ms 26.78% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1696ms 11.46% 21.29% 3560ms 24.06% __GI___exp 0 0% 21.29% 3289ms 22.23% MonodomainProblem::WriteOneStep 2ms 0.014% 21.30% 3129ms 21.14% Hdf5DataWriter::PutVector 0 0% 21.30% 3127ms 21.13% H5Dwrite 1ms 0.0068% 21.31% 3096ms 20.92% H5D__write 95ms 0.64% 21.95% 2584ms 17.46% AbstractCardiacTissue::UpdateCaches (inline) 844ms 5.70% 27.65% 2443ms 16.51% CellLuoRudy1991FromCellML::GetIIonic 2ms 0.014% 27.67% 1882ms 12.72% H5D__chunk_collective_write 26ms 0.18% 27.84% 1880ms 12.70% H5F_set_coll_metadata_reads 1636ms 11.06% 38.90% 1789ms 12.09% __ieee754_exp_fma 23ms 0.16% 39.05% 1637ms 11.06% H5FD_s3comms_uriencode 1ms 0.0068% 39.06% 1549ms 10.47% LinearSystem::Solve 0 0% 39.06% 1429ms 9.66% KSPSolve 2ms 0.014% 39.07% 1429ms 9.66% KSPSolve_Private 7ms 0.047% 39.12% 1411ms 9.54% KSPSolve_CG 3ms 0.02% 39.14% 1272ms 8.60% H5F_block_write 1ms 0.0068% 39.15% 1269ms 8.58% H5F__accum_write 0 0% 39.15% 1269ms 8.58% H5PB_write 3ms 0.02% 39.17% 1268ms 8.57% H5FD_write 45ms 0.3% 39.47% 1262ms 8.53% 4ms 0.027% 39.50% 1184ms 8.00% H5D__mpio_select_write 5ms 0.034% 39.53% 1102ms 7.45% H5D__chunk_cacheable 4ms 0.027% 39.56% 1064ms 7.19% PMPI_File_write_at_all 1043ms 7.05% 46.61% 1047ms 7.08% __GI_pwritev64 365ms 2.47% 49.07% 934ms 6.31% H5S_select_iterate 9ms 0.061% 49.14% 855ms 5.78% std::pow (inline) 79ms 0.53% 49.67% 846ms 5.72% __pow 102ms 0.69% 50.36% 766ms 5.18% __ieee754_pow_fma 4ms 0.027% 50.39% 762ms 5.15% PCApply 1ms 0.0068% 50.39% 755ms 5.10% PCApply_BJacobi_Singleblock 0 0% 50.39% 721ms 4.87% KSPSolve_PREONLY 2ms 0.014% 50.41% 717ms 4.85% PCApply_ICC 1ms 0.0068% 50.41% 715ms 4.83% MatSolve 705ms 4.76% 55.18% 714ms 4.82% MatSolve_SeqSBAIJ_1_NaturalOrdering 294ms 1.99% 57.16% 668ms 4.51% MonodomainSolver::SetupLinearSystem 300ms 2.03% 59.19% 635ms 4.29% CellLuoRudy1991FromCellML::VerifyStateVariables 2ms 0.014% 59.20% 590ms 3.99% MatMult 586ms 3.96% 63.16% 588ms 3.97% MatMult_SeqAIJ 80ms 0.54% 63.70% 585ms 3.95% H5D__chunk_set_sizes 0 0% 63.70% 580ms 3.92% KSP_PCApply.lto_priv.7 49ms 0.33% 64.04% 451ms 3.05% H5S_mpio_space_type 365ms 2.47% 66.50% 365ms 2.47% log_inline (inline) 141ms 0.95% 67.46% 287ms 1.94% TimeStepper::TimeStepper 285ms 1.93% 69.38% 286ms 1.93% exp_inline (inline) 4ms 0.027% 69.41% 244ms 1.65% KSPConvergedDefault 46ms 0.31% 69.72% 202ms 1.37% __GI___libc_malloc 17ms 0.11% 69.83% 186ms 1.26% H5VM_chunk_index 145ms 0.98% 70.81% 185ms 1.25% _int_malloc 0 0% 70.81% 182ms 1.23% KSP_PCApply 7ms 0.047% 70.86% 176ms 1.19% ompi_datatype_destroy 6ms 0.041% 70.90% 173ms 1.17% MPI_Type_free 94ms 0.64% 71.54% 172ms 1.16% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 9ms 0.061% 71.60% 167ms 1.13% ompi_datatype_create 99ms 0.67% 72.27% 167ms 1.13% top12 (inline) 38ms 0.26% 72.52% 164ms 1.11% AbstractCardiacCell::SetVoltage (partial-inline) 125ms 0.84% 73.37% 160ms 1.08% AbstractOneStepIvpOdeSolver::Solve 0 0% 73.37% 160ms 1.08% Hdf5DataWriter::PutUnlimitedVariable 27ms 0.18% 73.55% 157ms 1.06% __GI___libc_free 6ms 0.041% 73.59% 155ms 1.05% ompi_info_register_framework_params 45ms 0.3% 73.90% 154ms 1.04% ompi_datatype_release_args 152ms 1.03% 74.92% 152ms 1.03% ddot_ 131ms 0.89% 75.81% 150ms 1.01% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 150ms 1.01% 76.82% 150ms 1.01% std::isinf (inline) 143ms 0.97% 77.79% 143ms 0.97% [libchaste_heart.so] 132ms 0.89% 78.68% 132ms 0.89% TimeStepper::CalculateNextTime 49ms 0.33% 79.01% 130ms 0.88% _int_free 3ms 0.02% 79.03% 128ms 0.86% PMPI_File_set_view 124ms 0.84% 79.87% 124ms 0.84% __ieee754_log_fma 120ms 0.81% 80.68% 120ms 0.81% __memcpy_avx_unaligned_erms 48ms 0.32% 81.00% 115ms 0.78% std::__cxx11::basic_string::basic_string 20ms 0.14% 81.14% 113ms 0.76% H5S_set_version 3ms 0.02% 81.16% 111ms 0.75% PMPI_Type_create_resized 0 0% 81.16% 106ms 0.72% VecNorm 92ms 0.62% 81.78% 104ms 0.7% AbstractParameterisedSystem::SetAnyVariable 54ms 0.36% 82.15% 100ms 0.68% H5S_hyper_add_span_element 3ms 0.02% 82.17% 100ms 0.68% ompi_datatype_duplicate 1ms 0.0068% 82.17% 96ms 0.65% VecNorm_Seq 0 0% 82.17% 94ms 0.64% VecDuplicate 6ms 0.041% 82.21% 94ms 0.64% VecDuplicate_MPI 34ms 0.23% 82.44% 93ms 0.63% H5VM_array_calc 4ms 0.027% 82.47% 92ms 0.62% VecTDot 88ms 0.59% 83.07% 88ms 0.59% H5VM_array_offset_pre 0 0% 83.07% 88ms 0.59% VecTDot_Seq 2ms 0.014% 83.08% 88ms 0.59% VecXDot_Seq_Private.constprop.0 71ms 0.48% 83.56% 86ms 0.58% AbstractParameterisedSystem::GetAnyVariable 83ms 0.56% 84.12% 83ms 0.56% H5VM_chunk_index_scaled 26ms 0.18% 84.30% 82ms 0.55% __libc_calloc 41ms 0.28% 84.57% 81ms 0.55% AbstractCardiacCell::GetVoltage (partial-inline) 76ms 0.51% 85.09% 76ms 0.51% [libm.so.6] 13ms 0.088% 85.17% 76ms 0.51% std::vector::_M_assign_aux (inline) 0 0% 85.17% 76ms 0.51% std::vector::assign (inline)