File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 389ms, 88.41% of 440ms total Dropped 175 nodes (cum <= 2.20ms) flat flat% sum% cum cum% 0 0% 0% 434ms 98.64% __libc_start_call_main 0 0% 0% 434ms 98.64% __libc_start_main_impl 0 0% 0% 434ms 98.64% _start 0 0% 0% 431ms 97.95% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 431ms 97.95% CxxTest::TestRunner::runAllTests 0 0% 0% 431ms 97.95% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 431ms 97.95% main 0 0% 0% 395ms 89.77% CxxTest::RealTestDescription::run 0 0% 0% 395ms 89.77% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 395ms 89.77% CxxTest::TestRunner::runTest (inline) 0 0% 0% 395ms 89.77% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 395ms 89.77% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 391ms 88.86% AbstractCardiacProblem::Solve 0 0% 0% 389ms 88.41% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 347ms 78.86% LinearSystem::Solve 0 0% 0% 346ms 78.64% KSPSolve 0 0% 0% 346ms 78.64% KSPSolve_Private 0 0% 0% 344ms 78.18% KSPSolve_CG 0 0% 0% 204ms 46.36% KSP_PCApply.lto_priv.7 0 0% 0% 193ms 43.86% PCApply 0 0% 0% 193ms 43.86% PCApply_BJacobi_Singleblock 0 0% 0% 161ms 36.59% KSPSolve_PREONLY (partial-inline) 1ms 0.23% 0.23% 152ms 34.55% MatSolve 0 0% 0.23% 152ms 34.55% PCApply_ICC 149ms 33.86% 34.09% 151ms 34.32% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 2ms 0.45% 34.55% 73ms 16.59% MatMult 9ms 2.05% 36.59% 71ms 16.14% MatMult_SeqAIJ (partial-inline) 62ms 14.09% 50.68% 71ms 16.14% MatMult_SeqAIJ_Inode (inline) 48ms 10.91% 61.59% 48ms 10.91% ddot_ 0 0% 61.59% 38ms 8.64% AbstractCardiacTissue::SolveCellSystems 0 0% 61.59% 32ms 7.27% CxxTest::RealWorldDescription::setUp 0 0% 61.59% 32ms 7.27% PetscInitialize 0 0% 61.59% 32ms 7.27% PetscSetup::setUpWorld 0 0% 61.59% 32ms 7.27% PetscSetupUtils::CommonSetup 0 0% 61.59% 32ms 7.27% PetscSetupUtils::InitialisePetsc 0 0% 61.59% 31ms 7.05% AbstractCardiacCell::ComputeExceptVoltage 0 0% 61.59% 31ms 7.05% PMPI_Init_thread 0 0% 61.59% 31ms 7.05% ompi_mpi_init 0 0% 61.59% 30ms 6.82% VecTDot 0 0% 61.59% 30ms 6.82% VecTDot_Seq 0 0% 61.59% 30ms 6.82% VecXDot_Seq_Private.constprop.0 0 0% 61.59% 29ms 6.59% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 61.59% 29ms 6.59% MatNullSpaceRemove 1ms 0.23% 61.82% 27ms 6.14% EulerIvpOdeSolver::CalculateNextYValue 7ms 1.59% 63.41% 26ms 5.91% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 63.41% 24ms 5.45% 0 0% 63.41% 22ms 5.00% orte_init 0 0% 63.41% 19ms 4.32% VecNorm 0 0% 63.41% 19ms 4.32% VecNorm_Seq 8ms 1.82% 65.23% 19ms 4.32% __GI___exp 0 0% 65.23% 15ms 3.41% VecMDot 2ms 0.45% 65.68% 15ms 3.41% VecMXDot_Private 0 0% 65.68% 14ms 3.18% VecAYPX 14ms 3.18% 68.86% 14ms 3.18% VecAYPX_Seq 0 0% 68.86% 14ms 3.18% VecMAXPY 13ms 2.95% 71.82% 14ms 3.18% VecMAXPY_Seq 13ms 2.95% 74.77% 13ms 2.95% VecMDot_Seq 0 0% 74.77% 13ms 2.95% hwloc_topology_load 0 0% 74.77% 12ms 2.73% hwloc_linux_get_tid_last_cpu_location 0 0% 74.77% 12ms 2.73% mca_base_framework_open 0 0% 74.77% 11ms 2.50% VecDuplicate 0 0% 74.77% 11ms 2.50% VecDuplicate_Seq 0 0% 74.77% 11ms 2.50% __GI__dl_catch_exception 0 0% 74.77% 11ms 2.50% _dl_catch_error 0 0% 74.77% 11ms 2.50% _dlerror_run 0 0% 74.77% 11ms 2.50% mca_base_framework_components_register 0 0% 74.77% 11ms 2.50% mca_base_framework_register 0 0% 74.77% 10ms 2.27% KSP_PCApply (partial-inline) 0 0% 74.77% 10ms 2.27% ___dlopen 9ms 2.05% 76.82% 10ms 2.27% __ieee754_exp_fma 0 0% 76.82% 10ms 2.27% _dl_open 0 0% 76.82% 10ms 2.27% dlopen_doit 0 0% 76.82% 10ms 2.27% dlopen_implementation (inline) 0 0% 76.82% 10ms 2.27% opal_stackframe_output 0 0% 76.82% 9ms 2.05% VecSetType 0 0% 76.82% 9ms 2.05% dl_open_worker 0 0% 76.82% 9ms 2.05% dl_open_worker_begin 0 0% 76.82% 9ms 2.05% mca_base_component_find 0 0% 76.82% 9ms 2.05% mca_base_component_repository_open 1ms 0.23% 77.05% 8ms 1.82% PetscMallocA 0 0% 77.05% 7ms 1.59% PetscMallocAlign (partial-inline) 1ms 0.23% 77.27% 7ms 1.59% _dl_map_object 0 0% 77.27% 6ms 1.36% PetscMemzero (inline) 6ms 1.36% 78.64% 6ms 1.36% __memset_avx2_unaligned_erms 0 0% 78.64% 6ms 1.36% _dl_init 1ms 0.23% 78.86% 6ms 1.36% _dl_runtime_resolve_xsavec 0 0% 78.86% 6ms 1.36% _dl_start_user 0 0% 78.86% 6ms 1.36% call_init (inline) 0 0% 78.86% 5ms 1.14% AbstractCardiacTissue::UpdateCaches (inline) 2ms 0.45% 79.32% 5ms 1.14% CellLuoRudy1991FromCellML::GetIIonic 0 0% 79.32% 5ms 1.14% PetscMemcpy (inline) 0 0% 79.32% 5ms 1.14% VecCreate_Seq 0 0% 79.32% 5ms 1.14% VecDestroy 5ms 1.14% 80.45% 5ms 1.14% __GI___libc_read 2ms 0.45% 80.91% 5ms 1.14% _dl_fixup 0 0% 80.91% 5ms 1.14% _dl_map_object_deps 0 0% 80.91% 5ms 1.14% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 80.91% 5ms 1.14% boost::serialization::singleton::get_instance 0 0% 80.91% 5ms 1.14% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 80.91% 5ms 1.14% opal_hwloc_base_get_topology 0 0% 80.91% 5ms 1.14% openaux 0 0% 80.91% 5ms 1.14% orte_ess_base_proc_binding 5ms 1.14% 82.05% 5ms 1.14% strcmp 0 0% 82.05% 4ms 0.91% AbstractCardiacProblem::Initialise 0 0% 82.05% 4ms 0.91% BidomainSolver::SetupLinearSystem 0 0% 82.05% 4ms 0.91% CxxTest::RealWorldDescription::tearDown 0 0% 82.05% 4ms 0.91% PetscFinalize 0 0% 82.05% 4ms 0.91% PetscHeaderDestroy_Private 0 0% 82.05% 4ms 0.91% PetscSetup::tearDownWorld 0 0% 82.05% 4ms 0.91% PetscSetupUtils::CommonFinalize 0 0% 82.05% 4ms 0.91% VecAXPY 0 0% 82.05% 4ms 0.91% VecAXPY_Seq 4ms 0.91% 82.95% 4ms 0.91% __memcpy_avx_unaligned_erms 0 0% 82.95% 4ms 0.91% _dl_lookup_symbol_x 1ms 0.23% 83.18% 4ms 0.91% _int_malloc 1ms 0.23% 83.41% 4ms 0.91% boost::serialization::void_cast_detail::void_caster::recursive_register 4ms 0.91% 84.32% 4ms 0.91% daxpy_ 0 0% 84.32% 3ms 0.68% AbstractFeVolumeIntegralAssembler::AssembleOnElement 0 0% 84.32% 3ms 0.68% AbstractFeVolumeIntegralAssembler::DoAssemble 0 0% 84.32% 3ms 0.68% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 84.32% 3ms 0.68% PetscComposedQuantitiesDestroy 3ms 0.68% 85.00% 3ms 0.68% PetscFreeA 0 0% 85.00% 3ms 0.68% VecCreate 0 0% 85.00% 3ms 0.68% XOpenDisplay 0 0% 85.00% 3ms 0.68% [hwloc_gl.so] 0 0% 85.00% 3ms 0.68% _XConnectXCB 1ms 0.23% 85.23% 3ms 0.68% __GI___libc_free 0 0% 85.23% 3ms 0.68% __GI___libc_malloc 0 0% 85.23% 3ms 0.68% __GI_exit 0 0% 85.23% 3ms 0.68% __cxa_finalize 3ms 0.68% 85.91% 3ms 0.68% __libc_connect 0 0% 85.91% 3ms 0.68% __posix_memalign 0 0% 85.91% 3ms 0.68% __run_exit_handlers 3ms 0.68% 86.59% 3ms 0.68% __strcmp_avx2 0 0% 86.59% 3ms 0.68% _dl_call_fini 0 0% 86.59% 3ms 0.68% _dl_fini 1ms 0.23% 86.82% 3ms 0.68% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 1ms 0.23% 87.05% 3ms 0.68% boost::serialization::typeid_system::extended_type_info_typeid_0::is_equal 2ms 0.45% 87.50% 3ms 0.68% do_lookup_x 3ms 0.68% 88.18% 3ms 0.68% malloc_consolidate 0 0% 88.18% 3ms 0.68% mca_base_framework_components_open 1ms 0.23% 88.41% 3ms 0.68% mca_base_var_generate_full_name4 0 0% 88.41% 3ms 0.68% mca_topo_base_dist_graph_neighbors_count 0 0% 88.41% 3ms 0.68% ompi_mpi_finalize 0 0% 88.41% 3ms 0.68% xcb_connect_to_display_with_auth_info