File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12656ms, 85.43% of 14814ms total Dropped 729 nodes (cum <= 74.07ms) flat flat% sum% cum cum% 0 0% 0% 14806ms 99.95% __libc_start_call_main 0 0% 0% 14806ms 99.95% __libc_start_main_impl 0 0% 0% 14806ms 99.95% _start 0 0% 0% 14803ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14803ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14803ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14803ms 99.93% main 0 0% 0% 14772ms 99.72% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14772ms 99.72% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14772ms 99.72% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 1ms 0.0068% 0.0068% 14750ms 99.57% AbstractCardiacProblem::Solve 3ms 0.02% 0.027% 11437ms 77.20% AbstractDynamicLinearPdeSolver::Solve 30ms 0.2% 0.23% 9183ms 61.99% AbstractCardiacTissue::SolveCellSystems 141ms 0.95% 1.18% 5653ms 38.16% AbstractCardiacCell::ComputeExceptVoltage 175ms 1.18% 2.36% 4846ms 32.71% AbstractOneStepIvpOdeSolver::InternalSolve 175ms 1.18% 3.54% 4130ms 27.88% EulerIvpOdeSolver::CalculateNextYValue 953ms 6.43% 9.98% 3910ms 26.39% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1754ms 11.84% 21.82% 3511ms 23.70% __GI___exp 1ms 0.0068% 21.82% 3248ms 21.93% MonodomainProblem::WriteOneStep 0 0% 21.82% 3093ms 20.88% Hdf5DataWriter::PutVector 1ms 0.0068% 21.83% 3090ms 20.86% H5Dwrite 3ms 0.02% 21.85% 3062ms 20.67% H5D__write 83ms 0.56% 22.41% 2691ms 18.17% AbstractCardiacTissue::UpdateCaches (inline) 853ms 5.76% 28.17% 2564ms 17.31% CellLuoRudy1991FromCellML::GetIIonic 0 0% 28.17% 1767ms 11.93% H5D__chunk_collective_write 23ms 0.16% 28.32% 1767ms 11.93% H5F_set_coll_metadata_reads 1552ms 10.48% 38.80% 1693ms 11.43% __ieee754_exp_fma 12ms 0.081% 38.88% 1586ms 10.71% H5FD_s3comms_uriencode 1ms 0.0068% 38.89% 1489ms 10.05% LinearSystem::Solve 0 0% 38.89% 1348ms 9.10% KSPSolve 4ms 0.027% 38.92% 1348ms 9.10% KSPSolve_Private 4ms 0.027% 38.94% 1338ms 9.03% KSPSolve_CG 1ms 0.0068% 38.95% 1229ms 8.30% H5F_block_write 1ms 0.0068% 38.96% 1228ms 8.29% H5PB_write 3ms 0.02% 38.98% 1227ms 8.28% H5F__accum_write 2ms 0.014% 38.99% 1224ms 8.26% H5FD_write 53ms 0.36% 39.35% 1222ms 8.25% 7ms 0.047% 39.40% 1183ms 7.99% H5D__chunk_cacheable 2ms 0.014% 39.41% 1139ms 7.69% H5D__mpio_select_write 1ms 0.0068% 39.42% 1053ms 7.11% PMPI_File_write_at_all 429ms 2.90% 42.31% 1023ms 6.91% H5S_select_iterate 1015ms 6.85% 49.16% 1019ms 6.88% __GI_pwritev64 7ms 0.047% 49.21% 919ms 6.20% std::pow (inline) 83ms 0.56% 49.77% 912ms 6.16% __pow 121ms 0.82% 50.59% 826ms 5.58% __ieee754_pow_fma 325ms 2.19% 52.78% 745ms 5.03% MonodomainSolver::SetupLinearSystem 0 0% 52.78% 715ms 4.83% PCApply 0 0% 52.78% 714ms 4.82% PCApply_BJacobi_Singleblock 0 0% 52.78% 680ms 4.59% KSPSolve_PREONLY 0 0% 52.78% 676ms 4.56% MatSolve 668ms 4.51% 57.29% 676ms 4.56% MatSolve_SeqSBAIJ_1_NaturalOrdering 0 0% 57.29% 676ms 4.56% PCApply_ICC 320ms 2.16% 59.45% 664ms 4.48% CellLuoRudy1991FromCellML::VerifyStateVariables 2ms 0.014% 59.46% 623ms 4.21% MatMult 619ms 4.18% 63.64% 621ms 4.19% MatMult_SeqAIJ 57ms 0.38% 64.03% 608ms 4.10% H5D__chunk_set_sizes 4ms 0.027% 64.05% 526ms 3.55% KSP_PCApply.lto_priv.7 54ms 0.36% 64.42% 442ms 2.98% H5S_mpio_space_type 388ms 2.62% 67.04% 388ms 2.62% log_inline (inline) 280ms 1.89% 68.93% 280ms 1.89% exp_inline (inline) 149ms 1.01% 69.93% 258ms 1.74% TimeStepper::TimeStepper 1ms 0.0068% 69.94% 237ms 1.60% KSPConvergedDefault 49ms 0.33% 70.27% 213ms 1.44% __GI___libc_malloc 172ms 1.16% 71.43% 210ms 1.42% _int_malloc 19ms 0.13% 71.56% 207ms 1.40% H5VM_chunk_index 111ms 0.75% 72.31% 206ms 1.39% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 0 0% 72.31% 193ms 1.30% KSP_PCApply 111ms 0.75% 73.06% 178ms 1.20% top12 (inline) 8ms 0.054% 73.11% 177ms 1.19% ompi_datatype_create 171ms 1.15% 74.27% 171ms 1.15% [libchaste_heart.so] 146ms 0.99% 75.25% 169ms 1.14% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 165ms 1.11% 76.37% 165ms 1.11% std::isinf (inline) 0 0% 76.37% 153ms 1.03% Hdf5DataWriter::PutUnlimitedVariable 121ms 0.82% 77.18% 152ms 1.03% AbstractOneStepIvpOdeSolver::Solve 28ms 0.19% 77.37% 150ms 1.01% AbstractCardiacCell::SetVoltage (partial-inline) 10ms 0.068% 77.44% 145ms 0.98% MPI_Type_free 33ms 0.22% 77.66% 145ms 0.98% __GI___libc_free 5ms 0.034% 77.70% 140ms 0.95% ompi_datatype_destroy 132ms 0.89% 78.59% 132ms 0.89% ddot_ 6ms 0.041% 78.63% 126ms 0.85% ompi_info_register_framework_params 125ms 0.84% 79.47% 125ms 0.84% __ieee754_log_fma 27ms 0.18% 79.65% 124ms 0.84% ompi_datatype_release_args 12ms 0.081% 79.74% 114ms 0.77% H5S_set_version 42ms 0.28% 80.02% 112ms 0.76% _int_free 1ms 0.0068% 80.03% 109ms 0.74% VecDuplicate 57ms 0.38% 80.41% 108ms 0.73% H5S_hyper_add_span_element 5ms 0.034% 80.44% 108ms 0.73% VecDuplicate_MPI 104ms 0.7% 81.15% 104ms 0.7% TimeStepper::CalculateNextTime 45ms 0.3% 81.45% 102ms 0.69% H5VM_array_calc 4ms 0.027% 81.48% 101ms 0.68% PMPI_File_set_view 38ms 0.26% 81.73% 101ms 0.68% std::__cxx11::basic_string::basic_string 78ms 0.53% 82.26% 98ms 0.66% AbstractParameterisedSystem::GetAnyVariable 98ms 0.66% 82.92% 98ms 0.66% H5VM_chunk_index_scaled 3ms 0.02% 82.94% 97ms 0.65% PMPI_Type_create_resized 1ms 0.0068% 82.95% 94ms 0.63% VecNorm 87ms 0.59% 83.54% 92ms 0.62% AbstractParameterisedSystem::SetAnyVariable 91ms 0.61% 84.15% 91ms 0.61% H5VM_array_offset_pre 45ms 0.3% 84.45% 89ms 0.6% AbstractCardiacCell::GetVoltage (partial-inline) 1ms 0.0068% 84.46% 89ms 0.6% ompi_datatype_duplicate 86ms 0.58% 85.04% 86ms 0.58% __memcpy_avx_unaligned_erms 2ms 0.014% 85.05% 85ms 0.57% VecNorm_Seq 0 0% 85.05% 83ms 0.56% VecTDot 21ms 0.14% 85.20% 83ms 0.56% __libc_calloc 4ms 0.027% 85.22% 83ms 0.56% opal_datatype_create_desc 0 0% 85.22% 81ms 0.55% VecTDot_Seq 1ms 0.0068% 85.23% 81ms 0.55% VecXDot_Seq_Private.constprop.0 27ms 0.18% 85.41% 75ms 0.51% H5S_select_iter_next 3ms 0.02% 85.43% 75ms 0.51% PMPI_Type_vector